BAC Information

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BAC

Clone NameB6Ng01-153J06
Chromosome13 (Build37)
Map Location 36,255,835 - 36,256,800
singlet/doubletsinglet
Overlap geneFars2
Upstream geneCdyl, Rpp40, LOC100041568, Ppp1r3g, Lyrm4, LOC100042773
Downstream geneLOC100041590, LOC666758, Nrn1, F13a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153J06.bB6Ng01-153J06.g
ACCDH948851DH948852
length9681,185
definitionDH948851|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J06, 5' end.DH948852|Mus musculus domesticus DNA, BAC clone: B6Ng01-153J06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcttccatggctacaacataagaaatgaaaaaacaaattcaag
accctactttttgtttaagggagaaaagtcttttacctttagatattcca
tacctgaaattcatttagagacaaaagtacagtactcctaaagaatatat
gtcctaagtagtcattttcaaacatggtccactgtgaatttaaggatgca
aaagtggtaacaggcaaaacaaatgaatcccaggttaaaattcaagtatt
tttttgtgtccataaaggggggggggggataatataaaaacatttggtag
acacttagtaatgctaccctgtatttgaacccagtaaaaacagacatctc
ctttagcaaaaacacagtgtttatttagttatcttaagatctattaagta
ggttatttttaaagtgttttttttaatatcatgaatttcaaggattcttt
atttcttattatgatcgctgaatggggtgaaatttccgcaaagctattat
ggcaatagtacaagccagtggccaatacactatttcaggaaagcacaggt
tactatcaatgcctaaggactcaactcgaggagaatggcagtgggggctt
tgctacccattcctcagagttcctgactatgtagtccagttatttaagga
aagaggtaagaaaggagacaggagaaaaaaataaactcaagatttgaagg
atgtagttatcatggaggaaactgcaatcctaaggaaatttcctcataat
ctacaaaatctatagtgccatggtgtctatattttctaatgttcataaac
tgaactagcaatgaattttctttaaaaacaggatgtgaaaactccttaaa
acctaattagcagagttactttaaaaaaaaaaaaaattggaagactaaaa
aatgtcagctggttttctttacccattattcttgggggaaaaaaaaacag
ttaatttagaaagagatt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaaagtgtgggacactatgcccctccttagatttggg
aacaaaacacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccataa
tcagcatccaaacgctgacacctttgcatacactagcaagattttattga
aggacccagatgtagctgtctcttgttagactatgccgggggcctagcaa
cacagaaatggatgttctctgtcagctaatggatggatatagggttccct
atggaggagctagaagaatgtagccaagagctaaagggatctgcaaccct
tataggtggaacacatttatgaactaaccagtacccggaacctcttgact
tctagctgcaatatattacaaagaatggccatgtcggccatcctggaata
gaagctcattgacttgtcaacttaatggccatacagggaaaaatcaggta
tcaaatgagttgatgttgttctgtgatcagacgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_36255835_36256800
seq2: B6Ng01-153J06.b_41_1007 (reverse)

seq1  ATCTCTTTTCTCAATTAACTG-TTTTTTTTCCCCCCAGAATAAATAAGAT  49
      ||||| ||||| ||||||||| ||||||||||||| |||||||    | |
seq2  ATCTC-TTTCTAAATTAACTGTTTTTTTTTCCCCCAAGAATAA--TGGGT  47

seq1  AAAGAAAAGCAGCTAACA-TTTTTAGTCTTCC-ATTTTTTTTTTTTTTAA  97
      |||||||| ||||| ||| ||||||||||||| |||||||||||||||||
seq2  AAAGAAAACCAGCTGACATTTTTTAGTCTTCCAATTTTTTTTTTTTTTAA  97

seq1  AGTACACTCTGCTAATACGGTTTT-AGGAG-TTTCACATCCTGTTTTTAA  145
      |||| |||||||||||  |||||| ||||| |||||||||||||||||||
seq2  AGTA-ACTCTGCTAATTAGGTTTTAAGGAGTTTTCACATCCTGTTTTTAA  146

seq1  AGAAATCTTCATTGCTAGTTCAGTTTATGAACATTAG-AAATATAGACAC  194
      |||||  |||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAA-ATTCATTGCTAGTTCAGTTTATGAACATTAGAAAATATAGACAC  195

seq1  CATGGCACTATAGATTTTGTAGATTATGAGGAAATTTCCTTAGGATTGCA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCACTATAGATTTTGTAGATTATGAGGAAATTTCCTTAGGATTGCA  245

seq1  GTTTCCTCCATGATAACTACATCCTTCAAATCTTGAGTTTATTTTTTTCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTCCATGATAACTACATCCTTCAAATCTTGAGTTTATTTTTTTCT  295

seq1  CCTGTCTCCTTTCTTACCTCTTTCCTTAAATAACTGGACTACATAGTCAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCCTTTCTTACCTCTTTCCTTAAATAACTGGACTACATAGTCAG  345

seq1  GAACTCTGAGGAATGGGTAGCAAAGCCCCCACTGCCATTCTCCTCGAGTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGAGGAATGGGTAGCAAAGCCCCCACTGCCATTCTCCTCGAGTT  395

seq1  GAGTCCTTAGGCATTGATAGTAACCTGTGCTTTCCTGAAATAGTGTATTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTTAGGCATTGATAGTAACCTGTGCTTTCCTGAAATAGTGTATTG  445

seq1  GCCACTGGCTTGTACTATTGCCATAATAGCTTTGCGGAAATTTCACCCCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGGCTTGTACTATTGCCATAATAGCTTTGCGGAAATTTCACCCCA  495

seq1  TTCAGCGATCATAATAAGAAATAAAGAATCCTTGAAATTCATGATATTAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCGATCATAATAAGAAATAAAGAATCCTTGAAATTCATGATATTAA  545

seq1  AAAAAACACTTTAAAAATAACCTACTTAATAGATCTTAAGATAACTAAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACTTTAAAAATAACCTACTTAATAGATCTTAAGATAACTAAAT  595

seq1  AAACACTGTGTTTTTGCTAAAGGAGATGTCTGTTTTTACTGGGTTCAAAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGTGTTTTTGCTAAAGGAGATGTCTGTTTTTACTGGGTTCAAAT  645

seq1  ACAGGGTAGCATTACTAAGTGTCTACCAAATGTTTTTATATTATCCCCCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTAGCATTACTAAGTGTCTACCAAATGTTTTTATATTATCCCCCC  695

seq1  CCCCCCTTTATGGACACAAAAAAATACTTGAATTTTAACCTGGGATTCAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTTTATGGACACAAAAAAATACTTGAATTTTAACCTGGGATTCAT  745

seq1  TTGTTTTGCCTGTTACCACTTTTGCATCCTTAAATTCACAGTGGACCATG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGCCTGTTACCACTTTTGCATCCTTAAATTCACAGTGGACCATG  795

seq1  TTTGAAAATGACTACTTAGGACATATATTCTTTAGGAGTACTGTACTTTT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAATGACTACTTAGGACATATATTCTTTAGGAGTACTGTACTTTT  845

seq1  GTCTCTAAATGAATTTCAGGTATGGAATATCTAAAGGTAAAAGACTTTTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAAATGAATTTCAGGTATGGAATATCTAAAGGTAAAAGACTTTTC  895

seq1  TCCCTTAAACAAAAAGTAGGGTCTTGAATTTGTTTTTTCATTTCTTATGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAAACAAAAAGTAGGGTCTTGAATTTGTTTTTTCATTTCTTATGT  945

seq1  TGTAGCCATGGAAGATGAATTC  966
      ||||||||||||||||||||||
seq2  TGTAGCCATGGAAGATGAATTC  967