BAC Information

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BAC

Clone NameB6Ng01-156M22
Chromosome13 (Build37)
Map Location 4,878,288 - 4,879,459
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156M22.bB6Ng01-156M22.g
ACCDH951214DH951215
length1,1631,147
definitionDH951214|Mus musculus domesticus DNA, BAC clone: B6Ng01-156M22, 5' end.DH951215|Mus musculus domesticus DNA, BAC clone: B6Ng01-156M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgtatacatacatgactttgtttgatttgtgcgtatgagtgc
aacagctctcaatggtcaaaggatcttcttgccggttaagttacctctag
gtatgagctgcctgaagtgaatcctaagaaacaaatcctctgtaagagca
attcctgatcttaaccacttttaactactgagctgtcattctagctccag
tcaatactttattaatgtcaaaacatataagaggaaaagactctgggctc
tctgtccctttccaggcccagcattgactagataagtaatgagtttgatt
ttcatgaccgaacaaaagaacatctgcccacacattttaaatgtgagatc
acacaccatattatatcattattacatgaacatctgtccttggtactgca
tattatatagctatccagaattctggggttttgtcttcagcataacttat
gtaaccaagtttctattatgcatttcagtaatttaatcatggttcaaaat
gtttgtaggcttattgtatcaatagacactgacaaagagcaattatgagc
tttgcattattagtgtatttaccaacaatatgtatgtccatctctctcat
tcatactaatctgtagtattagatattttaatcaaattggttaggcagtg
agtgtcatgttttactactgttttaatttgtgttttttctattgctgaag
ccttagattttatgtgtttatttgtcatttttctttccttacacaccttg
ttaatactggtagtgctgacatttttcttatctacttaggtgagatttaa
atacaggagaaatattgtcacaatgttattgcaaagtgtaattttgctgt
gcagtaaccattatttgtatcctgaggattatttctggggcagattaaaa
gagctcagggatagattaacactatgatccctttgtcaatggtaatagta
aaatttgaaaacttgtttattttaggagcagtatcttgtccttaaaatat
actggaaaatattttagctacacaataacattttttaaaagaattatcat
ttcatacagtaacaacatctatatttactaaatgatattatgtgggaggt
actaggctggaatgatcttccgaaaggttattcttatatggaccaaatgg
agctgacctacac
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaatatcaaaaattcaggtgacagc
agatgctgggaaggatgtggagaaagaggaacactccattgttggtggga
ttgcaggcttgtacaaccactctggaaatcagtcttgcggttcctcagaa
aattggacatagtactactggaggatccagcaatacctctcctgggcata
tatccagaagatgccccaactggtaagaaggacacatgctccactatgtt
catagcagccttatttataatagccagaagctggaaagaacccagatgcc
cctcaacagaggaatggatacagaaattgtggtatatctacacaatggag
tattactcagctattaaaaagaatgaatttatgaaattcctagccaaatg
gatggacctgaagggcatcatcctgagtgaggtaacacattcacaaagga
actcacacaatttgtactcactgataagtggatattagccccaaacctag
gatacccaagatataagatacaacttgctaaacacatgaaactcaagaaa
aatgaagactgaagtgtggacactatgcccctccttagaagtgggaacaa
aacacccttggaaggagttacagagacaaagtttggagctgagatgaaag
gatggaccatgtagagactgccatatccagggatccaccccataatcagc
atccaaacgctgacaccattgcatacactagcaagattttatcgaaagga
cccagatgtagctgtcttttgtgagactatgccggggcctagcaacacag
aaatggatgctcacagtcagctaatggatggatcacagggctccaatgag
agctagagaagtacccaaggagctaggatctgcaccctatagtgacacat
tatgactacagtacccgagctcttgactctagctgcatatgtatcaaaga
tgctagtcgcatcactgaagagaggtcatgaaccgcacctttaattgtct
cgattaccggtacgcatgccaagggagatggtgtgtgggtgtatggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4878288_4879459
seq2: B6Ng01-156M22.b_47_1209

seq1  GAATTCTGTGTATACATACATGACTTTGTTTGATTTGTGCGTATGAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTATACATACATGACTTTGTTTGATTTGTGCGTATGAGTGC  50

seq1  AACAGCTCTCAATGGTCAAAGGATCTTCTTGCCGGTTAAGTTACCTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTCTCAATGGTCAAAGGATCTTCTTGCCGGTTAAGTTACCTCTAG  100

seq1  GTATGAGCTGCCTGAAGTGAATCCTAAGAAACAAATCCTCTGTAAGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGCTGCCTGAAGTGAATCCTAAGAAACAAATCCTCTGTAAGAGCA  150

seq1  ATTCCTGATCTTAACCACTTTTAACTACTGAGCTGTCATTCTAGCTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGATCTTAACCACTTTTAACTACTGAGCTGTCATTCTAGCTCCAG  200

seq1  TCAATACTTTATTAATGTCAAAACATATAAGAGGAAAAGACTCTGGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACTTTATTAATGTCAAAACATATAAGAGGAAAAGACTCTGGGCTC  250

seq1  TCTGTCCCTTTCCAGGCCCAGCATTGACTAGATAAGTAATGAGTTTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCCTTTCCAGGCCCAGCATTGACTAGATAAGTAATGAGTTTGATT  300

seq1  TTCATGACCGAACAAAAGAACATCTGCCCACACATTTTAAATGTGAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGACCGAACAAAAGAACATCTGCCCACACATTTTAAATGTGAGATC  350

seq1  ACACACCATATTATATCATTATTACATGAACATCTGTCCTTGGTACTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCATATTATATCATTATTACATGAACATCTGTCCTTGGTACTGCA  400

seq1  TATTATATAGCTATCCAGAATTCTGGGGTTTTGTCTTCAGCATAACTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATAGCTATCCAGAATTCTGGGGTTTTGTCTTCAGCATAACTTAT  450

seq1  GTAACCAAGTTTCTATTATGCATTTCAGTAATTTAATCATGGTTCAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCAAGTTTCTATTATGCATTTCAGTAATTTAATCATGGTTCAAAAT  500

seq1  GTTTGTAGGCTTATTGTATCAATAGACACTGACAAAGAGCAATTATGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAGGCTTATTGTATCAATAGACACTGACAAAGAGCAATTATGAGC  550

seq1  TTTGCATTATTAGTGTATTTACCAACAATATGTATGTCCATCTCTCTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTATTAGTGTATTTACCAACAATATGTATGTCCATCTCTCTCAT  600

seq1  TCATACTAATCTGTAGTATTAGATATTTTAATCAAATTGGTTAGGCAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTAATCTGTAGTATTAGATATTTTAATCAAATTGGTTAGGCAGTG  650

seq1  AGTGTCATGTTTTACTACTGTTTTAATTTGTGTTTTTTCTATTGCTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATGTTTTACTACTGTTTTAATTTGTGTTTTTTCTATTGCTGAAG  700

seq1  CCTTAGATTTTATGTGTTTATTTGTCATTTTTCTTTCCTTACACACCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGATTTTATGTGTTTATTTGTCATTTTTCTTTCCTTACACACCTTG  750

seq1  TTAATACTGGTAGTGCTGACATTTTTCTTATCTACTTAGGTGAGATTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTGGTAGTGCTGACATTTTTCTTATCTACTTAGGTGAGATTTAA  800

seq1  ATACAGGAGAAATATTGTCACAATGTTATTGCAAAGTGTAATTTTGCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGAGAAATATTGTCACAATGTTATTGCAAAGTGTAATTTTGCTGT  850

seq1  GCAGTAACCATTATTTGTATCCTGAGGATTATTTCTGGGGCAGATTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAACCATTATTTGTATCCTGAGGATTATTTCTGGGGCAGATTAAAA  900

seq1  GAGCTCAGGGAATAGATTAACACTATGATCCCTTTGTCAATGGTAATAGT  950
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAGGG-ATAGATTAACACTATGATCCCTTTGTCAATGGTAATAGT  949

seq1  AAAAATTTGAAAACTTGTTTATTTTAAGAAGCAGTATCTTGTCCTTAAAA  1000
       |||||||||||||||||||||||| || |||||||||||||||||||||
seq2  -AAAATTTGAAAACTTGTTTATTTT-AGGAGCAGTATCTTGTCCTTAAAA  997

seq1  TATACTGGAAAAATATTTTAGCTACACAATAACATATTTTAAAAGACATA  1050
      |||||||| |||||||||||||||||||||||||| |||||||||| || 
seq2  TATACTGG-AAAATATTTTAGCTACACAATAACATTTTTTAAAAGA-ATT  1045

seq1  ATCATTTCATAACAGTAACAACATCTAATATTTACTAAATGATTATTATG  1100
      |||||||||| ||||||||||||||| ||||||||||||||| |||||||
seq2  ATCATTTCAT-ACAGTAACAACATCT-ATATTTACTAAATGA-TATTATG  1092

seq1  TGGGAGGTACTAGGCCTGAAATGATCTACGAAAAAGTTTATTCTTATATA  1150
      |||||||||||||| ||| |||||||| |   |||| |||||||||||| 
seq2  TGGGAGGTACTAGG-CTGGAATGATCTTC-CGAAAGGTTATTCTTATATG  1140

seq1  GA-CAAAT-GAGCTGACCCTACAC  1172
      || ||||| ||||||| |||||||
seq2  GACCAAATGGAGCTGA-CCTACAC  1163