BAC Information

Click to search

BAC

Clone NameB6Ng01-158E02
Chromosome13 (Build37)
Map Location 67,632,712 - 67,770,293
singlet/doubletdoublet
Overlap geneZfp87, Zfp748, A530054K11Rik, LOC328277
Upstream geneMzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817
Downstream gene3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158E02.bB6Ng01-158E02.g
ACCDH952260DH952261
length970639
definitionDH952260|Mus musculus domesticus DNA, BAC clone: B6Ng01-158E02, 5' end.DH952261|Mus musculus domesticus DNA, BAC clone: B6Ng01-158E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,769,308 - 67,770,293)(67,632,712 - 67,633,350)
sequence
gaattcatacaggagaaaaaccataccagtgtgaagtgtgtggcaaggac
ttccatgtttcatcatcactatctaaacacgggataattcatatgggaga
gaagccatacaactgtgaagtatgtgggatgaccttccgcttttcatcat
cactatctaaacacaagagaaatcatacagggaagaaaccctacaagtgt
gaggaatgtggcaaggccttccattttccgtcagtactttggaaacacaa
gataagtcacactggagagaaaccctacaattgtgacttataaggcaagg
ccttccattactcatcattactttctaaatataagatgagtcatacagaa
gaaaacccccacaagtgatatatgtggcaaggccttccattatccttcaa
aactttccagccataagaaaattcatgcaggagagaaaccctacaagtgt
gacgtatgtgacaaggccttccattatccatcattacttactaaacacaa
ggtaattcatacaggaaaaaaaaccctcaagtgtgaagtatgtggcaaag
ccttccattatccctcacgactttccaagcataagaaaattcatggggct
ggagacatggctcagcagttaagagaactggctgcactttcaattgtgct
gtcctgggttcaagttccggcaaccacatgctggctcacagtcatgtatg
atggaatctgtttccctattctcgtatgcaggggtacatgcaggcagagc
actcatgtacataaaataaatgttatttacaaaattgatagtatgttgcc
tggtgactaaaagtaaaatataccagagacaaaccaaccctattagtgga
gcatgtggcaggacttccaatgtccagactatttttctaccacaagagaa
atcatatgggagagaaccctcattagagtatgtagctgtctctatgtcat
atactttctgaaccaggaga
gaattctgctgccctctctcttactttaacccctttaactgaaatgactc
ccatccctctgaaactcatccaagaaaattcctactcacccccccatgtt
ttattacctctcatgaatatcattatattttgttttgttttgttttgttt
tgtttttaaaaaccctggtgacagattttattgccacataaagatgacta
gttttttaattgtttcccacaaggatttgttagatctgtactgtgtgtct
agttcccttaaagtagtggaaaaagagagaacactgaagctgccctgttt
tcttcagcttgtaccctgccttcataggtaggagacaagctattcagtca
gtacagtttatcaccagttctgtgatggcctgttgatgctgtggatgcaa
agagagggatgggggatgagtgtcatgtgcttggctagtcagagtcctca
attttcagagcagcatttatgtcaatcaaggaatgagaaagtgaaaactg
tgtgtctgctcagcagatggtagtgctctgagcgaagtcactcagaggga
cacatgtgaatctcaggtagggagaaggaaatccctgttgtcaataaaca
ttattctgtatgaggaagggtgggtgatggtatgatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67769308_67770293
seq2: B6Ng01-158E02.b_49_1018 (reverse)

seq1  TCTCCTGTGTTCAGAAAGTAATTATGGACAATAGAGGAACAGGCTACATA  50
      ||||||| ||||||||||||  ||| ||| ||||||  ||| ||||||||
seq2  TCTCCTG-GTTCAGAAAGTA--TAT-GAC-ATAGAG--ACA-GCTACATA  42

seq1  CTTCCTAATTGGAGGGTTTCTCTCCCATATGATTTCTCTTGTGGTTAGAA  100
      ||  |||||  ||||| ||||||||||||||||||||||||||||   ||
seq2  CT--CTAAT--GAGGG-TTCTCTCCCATATGATTTCTCTTGTGGTAGAAA  87

seq1  AATAGTTCTGGACATTGGAAGTCCTTGCCACATGCTTCCACTAATAGGGT  150
      ||||| |||||||||||||||||| |||||||||| ||||||||||||||
seq2  AATAG-TCTGGACATTGGAAGTCC-TGCCACATGC-TCCACTAATAGGGT  134

seq1  TGGTTTGTCTCTGGTATATTTTACTTTTAGTCACCAGGCAACATACTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTCTCTGGTATATTTTACTTTTAGTCACCAGGCAACATACTATC  184

seq1  AATTTTGTAAATAACATTTATTTTATGTACATGAGTGCTCTGCCTGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTAAATAACATTTATTTTATGTACATGAGTGCTCTGCCTGCATG  234

seq1  TACCCCTGCATACGAGAATAGGGAAACAGATTCCATCATACATGACTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTGCATACGAGAATAGGGAAACAGATTCCATCATACATGACTGTG  284

seq1  AGCCAGCATGTGGTTGCCGGAACTTGAACCCAGGACAGCACAATTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCATGTGGTTGCCGGAACTTGAACCCAGGACAGCACAATTGAAAG  334

seq1  TGCAGCCAGTTCTCTTAACTGCTGAGCCATGTCTCCAGCCCCATGAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCAGTTCTCTTAACTGCTGAGCCATGTCTCCAGCCCCATGAATTT  384

seq1  TCTTATGCTTGGAAAGTCGTGAGGGATAATGGAAGGCTTTGCCACATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGCTTGGAAAGTCGTGAGGGATAATGGAAGGCTTTGCCACATACT  434

seq1  TCACACTTGAGGGTTTTTTTTCCTGTATGAATTACCTTGTGTTTAGTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTTGAGGGTTTTTTTTCCTGTATGAATTACCTTGTGTTTAGTAAG  484

seq1  TAATGATGGATAATGGAAGGCCTTGTCACATACGTCACACTTGTAGGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGGATAATGGAAGGCCTTGTCACATACGTCACACTTGTAGGGTT  534

seq1  TCTCTCCTGCATGAATTTTCTTATGGCTGGAAAGTTTTGAAGGATAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTGCATGAATTTTCTTATGGCTGGAAAGTTTTGAAGGATAATGG  584

seq1  AAGGCCTTGCCACATATATCACTTGTGGGGGTTTTCTTCTGTATGACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTGCCACATATATCACTTGTGGGGGTTTTCTTCTGTATGACTCA  634

seq1  TCTTATATTTAGAAAGTAATGATGAGTAATGGAAGGCCTTGCCTTATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATATTTAGAAAGTAATGATGAGTAATGGAAGGCCTTGCCTTATAAG  684

seq1  TCACAATTGTAGGGTTTCTCTCCAGTGTGACTTATCTTGTGTTTCCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTGTAGGGTTTCTCTCCAGTGTGACTTATCTTGTGTTTCCAAAG  734

seq1  TACTGACGGAAAATGGAAGGCCTTGCCACATTCCTCACACTTGTAGGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGACGGAAAATGGAAGGCCTTGCCACATTCCTCACACTTGTAGGGTT  784

seq1  TCTTCCCTGTATGATTTCTCTTGTGTTTAGATAGTGATGATGAAAAGCGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTGTATGATTTCTCTTGTGTTTAGATAGTGATGATGAAAAGCGG  834

seq1  AAGGTCATCCCACATACTTCACAGTTGTATGGCTTCTCTCCCATATGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATCCCACATACTTCACAGTTGTATGGCTTCTCTCCCATATGAAT  884

seq1  TATCCCGTGTTTAGATAGTGATGATGAAACATGGAAGTCCTTGCCACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCGTGTTTAGATAGTGATGATGAAACATGGAAGTCCTTGCCACACA  934

seq1  CTTCACACTGGTATGGTTTTTCTCCTGTATGAATTC  986
      ||||||||||||||||||||||||||||||||||||
seq2  CTTCACACTGGTATGGTTTTTCTCCTGTATGAATTC  970

seq1: chr13_67632712_67633350
seq2: B6Ng01-158E02.g_67_705

seq1  GAATTCTGCTGCCCTCTCTCTTACTTTAACCCCTTTAACTGAAATGACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGCCCTCTCTCTTACTTTAACCCCTTTAACTGAAATGACTC  50

seq1  CCATCCCTCTGAAACTCATCCAAGAAAATTCCTACTCACCCCCCCATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTCTGAAACTCATCCAAGAAAATTCCTACTCACCCCCCCATGTT  100

seq1  TTATTACCTCTCATGAATATCATTATATTTTGTTTTGTTTTGTTTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACCTCTCATGAATATCATTATATTTTGTTTTGTTTTGTTTTGTTT  150

seq1  TGTTTTTAAAAACCCTGGTGACAGATTTTATTGCCACATAAAGATGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAAAAACCCTGGTGACAGATTTTATTGCCACATAAAGATGACTA  200

seq1  GTTTTTTAATTGTTTCCCACAAGGATTTGTTAGATCTGTACTGTGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTAATTGTTTCCCACAAGGATTTGTTAGATCTGTACTGTGTGTCT  250

seq1  AGTTCCCTTAAAGTAGTGGAAAAAGAGAGAACACTGAAGCTGCCCTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCTTAAAGTAGTGGAAAAAGAGAGAACACTGAAGCTGCCCTGTTT  300

seq1  TCTTCAGCTTGTACCCTGCCTTCATAGGTAGGAGACAAGCTATTCAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCTTGTACCCTGCCTTCATAGGTAGGAGACAAGCTATTCAGTCA  350

seq1  GTACAGTTTATCACCAGTTCTGTGATGGCCTGTTGATGCTGTGGATGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTTTATCACCAGTTCTGTGATGGCCTGTTGATGCTGTGGATGCAA  400

seq1  AGAGAGGGATGGGGGATGAGTGTCATGTGCTTGGCTAGTCAGAGTCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGATGGGGGATGAGTGTCATGTGCTTGGCTAGTCAGAGTCCTCA  450

seq1  ATTTTCAGAGCAGCATTTATGTCAATCAAGGAATGAGAAAGTGAAAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGAGCAGCATTTATGTCAATCAAGGAATGAGAAAGTGAAAACTG  500

seq1  TGTGTCTGCTCAGCAGATGGTAGTGCTCTGAGCGAAGTCACTCAGAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGCTCAGCAGATGGTAGTGCTCTGAGCGAAGTCACTCAGAGGGA  550

seq1  CACATGTGAATCTCAGGTAGGGAGAAGGAAATCCCTGTTGTCAATAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGAATCTCAGGTAGGGAGAAGGAAATCCCTGTTGTCAATAAACA  600

seq1  TTATTCTGTATGAGGAAGGGTGGGTGATGGTATGATATA  639
      |||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTGTATGAGGAAGGGTGGGTGATGGTATGATATA  639