BAC Information

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BAC

Clone NameB6Ng01-158G10
Chromosome13 (Build37)
Map Location 35,601,189 - 35,697,881
singlet/doubletdoublet
Overlap genenone
Upstream gene1300014I06Rik, D0H6S2654E, EG432746, LOC666677, Prpf4b, 4933417A18Rik, LOC666697, 1810022C23Rik, Peci
Downstream geneCdyl, Rpp40, LOC100041568, Ppp1r3g, Lyrm4, LOC100042773, Fars2, LOC100041590, LOC666758
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158G10.bB6Ng01-158G10.g
ACCDH952357DH952358
length1,0441,111
definitionDH952357|Mus musculus domesticus DNA, BAC clone: B6Ng01-158G10, 5' end.DH952358|Mus musculus domesticus DNA, BAC clone: B6Ng01-158G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,696,833 - 35,697,881)(35,601,189 - 35,602,301)
sequence
gaattcaaaagactgggaagttccactctgagcaggaagagtgaaaaggg
ggtcaacacattactggaggaaatggtaccctgccatctgatgcagggag
gaagaaaacagcccaactcatcactggcttcattttctcaacacggatct
cgttcagattagaaaggtggaaataaacttggtcaaaaggtcattgacac
ccagggcaagtgaagagggagtaagaaagggccactgccattttaatagg
ctcattttcatgtcctgccggtagtgtgaatggagtgattacttttctat
gggatttggtggcatgaagttgtaagaaccgtggcagtggttggcatagt
gtaaaatgagggtgaggactggaacagttttcacagggcactggggactg
gagataatgctgagaacttctagaggaagtactacacctcagttttagtg
aggcacactatagagcccttgtggcatgctggtagtgtggattctctgga
cttcgcctcatgagagaaagtggagtgctggctggtgggttagtgattag
tgagaggcaaggagagagaaccttgtgttggataggatgtgactgacgtg
tctgagggacatctgtgtggagctgttcagatggcaaacagcaaaacaga
atctagagatcagaagggaatttggggttggggaaagcagctctgggtat
ggggtgtgaacagaaaaggggtagccagttggtgaatgagaccccaataa
ttcctaaatatagaagagagaagggcagactcaaagctagactctgcatc
gtgttgacttgacatccaaaaggagaagagagagagggcattcatggttg
gagacattccaaaatagagacagtgcagcagctagcagccctgtgccgca
ggatgatgaagctaaagaatgaaggagactgctcttggttgcgatgagga
tctttagaggatctttttcatctatacacagtaaatgttgagtaggacaa
tctttctctctctccccttatctcctccctctctctatctgtgt
gaattcccaggctttgtaggacaaagtcaccttctcccttagcagattca
gtagtattcacagaggaatctgtaatgtctccatgttcatgttaccttgg
tccacctcactgttggttaaagaacattcgatgtctgctctttggttatc
tgtaaggtttgagatgcatgatgtcactctctgtgccctcaaatcaaaga
aggtaaaaaaaaaaataataattccttataccctgctctaaacatgataa
gacaaacaaacctgttaaatggcgatctatgacacaaacctcacatcttt
agcataagtctccaatctccaccccagctgtcttcaaagaggtagattaa
ttacttccccagctactggggaccaggaaacttgggccatgtttcctgac
tcctcgattaatagagacagaaagcaggccaaaaatacattagcatggtt
aacgagagagtgttggaaattcaaagcattcgagggctttgttctgttct
gttttttatgagaatctattccagacacagtgcacatccgaagatgctga
atccagagtcccagcctcaggatgtgtttgctcatcccatggcttttgag
agaagaatagcagagctaccatggacaatttggtaactaaactttaactc
tgtattccttttctctgtatcttagatttttttctcaaaatagagacctt
aaataacatagggataaagagactgtctttgggcaagtagttttgtgtcc
agaaatgttcaaaccctgattaaagcttcaaatctgcattagtattctaa
aaccatcacaaatgagtggcttcagcatagaaatgtatgtccctttcatt
ccaaacactcaaagtccaggaggtttcagagggtagtaagacccaggtcc
ctggatgtttcccatggcttttctgacactgtggcattctttgcatgtag
gtacatagccacactccctggcttcatctacccattgtgttctctttgtt
ggtgtccatatttcttcatttacagggacaccagtgttactggcctatgt
tgtgtcacttggacacagcctggggctatcccagagaaggatctcattga
ggaatgcctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_35696833_35697881
seq2: B6Ng01-158G10.b_45_1088 (reverse)

seq1  ACACAGATAGAGAGAGAGAGGAGATAAGGAGGAGAGAGAGAAAGATTGTT  50
      |||||||||||||||| |||||||||||| ||||||||||||||||||| 
seq2  ACACAGATAGAGAGAGGGAGGAGATAAGG-GGAGAGAGAGAAAGATTGTC  49

seq1  CTACTCAACATTTACTGTGTATAGATTGAAAAAGATCCTCTAAAGATCCT  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTACTCAACATTTACTGTGTATAGA-TGAAAAAGATCCTCTAAAGATCCT  98

seq1  CATTCGCAACCAAGGGCAGTCTTCCTTCATTCTTTAGCTTCATCATCCTG  150
      || ||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  CA-TCGCAACCAAGAGCAGTC-TCCTTCATTCTTTAGCTTCATCATCCTG  146

seq1  CGGCACAGGGCCTGCTAGCTGCTGCACTGTCTCTATTTTGGAATGTCTCC  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CGGCACAGGG-CTGCTAGCTGCTGCACTGTCTCTATTTTGGAATGTCTCC  195

seq1  AACCATGAATGCCCTCTCTCTCTTCTCCTTTTGGATGTCAAGTCAACACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGAATGCCCTCTCTCTCTTCTCCTTTTGGATGTCAAGTCAACACG  245

seq1  ATGCAGAGTCTAGCTTTGAGTCTGCCCTTCTCTCTTCTATATTTAGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGTCTAGCTTTGAGTCTGCCCTTCTCTCTTCTATATTTAGGAAT  295

seq1  TATTGGGGTCTCATTCACCAACTGGCTACCCCTTTTCTGTTCACACCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGGTCTCATTCACCAACTGGCTACCCCTTTTCTGTTCACACCCCA  345

seq1  TACCCAGAGCTGCTTTCCCCAACCCCAAATTCCCTTCTGATCTCTAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGAGCTGCTTTCCCCAACCCCAAATTCCCTTCTGATCTCTAGATT  395

seq1  CTGTTTTGCTGTTTGCCATCTGAACAGCTCCACACAGATGTCCCTCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGCTGTTTGCCATCTGAACAGCTCCACACAGATGTCCCTCAGAC  445

seq1  ACGTCAGTCACATCCTATCCAACACAAGGTTCTCTCTCCTTGCCTCTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCAGTCACATCCTATCCAACACAAGGTTCTCTCTCCTTGCCTCTCAC  495

seq1  TAATCACTAACCCACCAGCCAGCACTCCACTTTCTCTCATGAGGCGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTAACCCACCAGCCAGCACTCCACTTTCTCTCATGAGGCGAAGT  545

seq1  CCAGAGAATCCACACTACCAGCATGCCACAAGGGCTCTATAGTGTGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAATCCACACTACCAGCATGCCACAAGGGCTCTATAGTGTGCCTC  595

seq1  ACTAAAACTGAGGTGTAGTACTTCCTCTAGAAGTTCTCAGCATTATCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACTGAGGTGTAGTACTTCCTCTAGAAGTTCTCAGCATTATCTCC  645

seq1  AGTCCCCAGTGCCCTGTGAAAACTGTTCCAGTCCTCACCCTCATTTTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCAGTGCCCTGTGAAAACTGTTCCAGTCCTCACCCTCATTTTACA  695

seq1  CTATGCCAACCACTGCCACGGTTCTTACAACTTCATGCCACCAAATCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCAACCACTGCCACGGTTCTTACAACTTCATGCCACCAAATCCCA  745

seq1  TAGAAAAGTAATCACTCCATTCACACTACCGGCAGGACATGAAAATGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGTAATCACTCCATTCACACTACCGGCAGGACATGAAAATGAGC  795

seq1  CTATTAAAATGGCAGTGGCCCTTTCTTACTCCCTCTTCACTTGCCCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAAATGGCAGTGGCCCTTTCTTACTCCCTCTTCACTTGCCCTGGG  845

seq1  TGTCAATGACCTTTTGACCAAGTTTATTTCCACCTTTCTAATCTGAACGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATGACCTTTTGACCAAGTTTATTTCCACCTTTCTAATCTGAACGA  895

seq1  GATCCGTGTTGAGAAAATGAAGCCAGTGATGAGTTGGGCTGTTTTCTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCGTGTTGAGAAAATGAAGCCAGTGATGAGTTGGGCTGTTTTCTTCC  945

seq1  TCCCTGCATCAGATGGCAGGGTACCATTTCCTCCAGTAATGTGTTGACCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCATCAGATGGCAGGGTACCATTTCCTCCAGTAATGTGTTGACCC  995

seq1  CCTTTTCACTCTTCCTGCTCAGAGTGGAACTTCCCAGTCTTTTGAATTC  1049
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCACTCTTCCTGCTCAGAGTGGAACTTCCCAGTCTTTTGAATTC  1044

seq1: chr13_35601189_35602301
seq2: B6Ng01-158G10.g_69_1179

seq1  GAATTCCCAGGCTTTGTAGGACAAAGTCACCTTCTCCCTTAGCAGATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGGCTTTGTAGGACAAAGTCACCTTCTCCCTTAGCAGATTCA  50

seq1  GTAGTATTCACAGAGGAATCTGTAATGTCTCCATGTTCATGTTACCTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATTCACAGAGGAATCTGTAATGTCTCCATGTTCATGTTACCTTGG  100

seq1  TCCACCTCACTGTTGGTTAAAGAACATTCGATGTCTGCTCTTTGGTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACTGTTGGTTAAAGAACATTCGATGTCTGCTCTTTGGTTATC  150

seq1  TGTAAGGTTTGAGATGCATGATGTCACTCTCTGTGCCCTCAAATCAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGTTTGAGATGCATGATGTCACTCTCTGTGCCCTCAAATCAAAGA  200

seq1  AGGTAAAAAAAAAAATAATAATTCCTTATACCCTGCTCTAAACATGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAAAAAAAAATAATAATTCCTTATACCCTGCTCTAAACATGATAA  250

seq1  GACAAACAAACCTGTTAAATGGCGATCTATGACACAAACCTCACATCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACAAACCTGTTAAATGGCGATCTATGACACAAACCTCACATCTTT  300

seq1  AGCATAAGTCTCCAATCTCCACCCCAGCTGTCTTCAAAGAGGTAGATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAGTCTCCAATCTCCACCCCAGCTGTCTTCAAAGAGGTAGATTAA  350

seq1  TTACTTCCCCAGCTACTGGGGACCAGGAAACTTGGGCCATGTTTCCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCCCCAGCTACTGGGGACCAGGAAACTTGGGCCATGTTTCCTGAC  400

seq1  TCCTCGATTAATAGAGACAGAAAGCAGGCCAAAAATACATTAGCATGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGATTAATAGAGACAGAAAGCAGGCCAAAAATACATTAGCATGGTT  450

seq1  AACGAGAGAGTGTTGGAAATTCAAAGCATTCGAGGGCTTTGTTCTGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGAGAGTGTTGGAAATTCAAAGCATTCGAGGGCTTTGTTCTGTTCT  500

seq1  GTTTTTTATGAGAATCTATTCCAGACACAGTGCACATCCGAAGATGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTATGAGAATCTATTCCAGACACAGTGCACATCCGAAGATGCTGA  550

seq1  ATCCAGAGTCCCAGCCTCAGGATGTGTTTGCTCATCCCATGGCTTTTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAGTCCCAGCCTCAGGATGTGTTTGCTCATCCCATGGCTTTTGAG  600

seq1  AGAAGAATAGCAGAGCTACCATGGACAATTTGGTAACTAAACTTTAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATAGCAGAGCTACCATGGACAATTTGGTAACTAAACTTTAACTC  650

seq1  TGTATTCCTTTTCTCTGTATCTTAGATTTTTTTCTCAAAATAGAGACCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCCTTTTCTCTGTATCTTAGATTTTTTTCTCAAAATAGAGACCTT  700

seq1  AAATAACATAGGGATAAAGAGACTGTCTTTGGGCAAGTAGTTTTGTGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACATAGGGATAAAGAGACTGTCTTTGGGCAAGTAGTTTTGTGTCC  750

seq1  AGAAATGTTCAAACCCTGATTAAAGCTTCAAATCTGCATTAGTATTCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTTCAAACCCTGATTAAAGCTTCAAATCTGCATTAGTATTCTAA  800

seq1  AACCATCACAAATGAGTGGCTTCAGCATAGAAATGTATGTCCCTTCCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AACCATCACAAATGAGTGGCTTCAGCATAGAAATGTATGTCCCTTTCATT  850

seq1  CCAAACACTCAAAGTCCAGGAGGTGTCAGAGGGTAGTAAGACCCAGGTCC  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCAAACACTCAAAGTCCAGGAGGTTTCAGAGGGTAGTAAGACCCAGGTCC  900

seq1  CTGGATGTTTCCCATGGC-TTTCTGACATCTGTGGCATTCTTTGCATGTA  949
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  CTGGATGTTTCCCATGGCTTTTCTGACA-CTGTGGCATTCTTTGCATGTA  949

seq1  GGTACATAGCCACACTCCCTGGCTTCATCTACCCATTGTGTTCTCTCTGT  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGTACATAGCCACACTCCCTGGCTTCATCTACCCATTGTGTTCTCTTTGT  999

seq1  TGGTGTCCATATTTCTCCATTTACAGGGACACCAGTG-TACTGGCTAGTT  1048
      |||||||||||||||| |||||||||||||||||||| |||||||   | 
seq2  TGGTGTCCATATTTCTTCATTTACAGGGACACCAGTGTTACTGGCCTATG  1049

seq1  TTGTGTCAACTTGACACAG-CTGGGGTTATCACAGAGAAAGGAGCTTCAG  1097
      ||||||||  | ||||||| |||||| |||| ||||| ||||| | ||| 
seq2  TTGTGTCACTTGGACACAGCCTGGGGCTATCCCAGAG-AAGGATC-TCA-  1096

seq1  TTGAGGAAATGCCTCC  1113
      |||||| |||||||||
seq2  TTGAGG-AATGCCTCC  1111