BAC Information

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BAC

Clone NameB6Ng01-158H09
Chromosome13 (Build37)
Map Location 111,465,467 - 111,633,528
singlet/doubletdoublet
Overlap genenone
Upstream genePde4d, LOC100040577, Rab3c, EG432803, 9830130M13Rik, Plk2
Downstream geneLOC100040614, LOC668159, 4732495G21Rik, LOC100040640, EG621953, Gpbp1, LOC100040666, Mier3, Map3k1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158H09.bB6Ng01-158H09.g
ACCDH952403DH952404
length7131,031
definitionDH952403|Mus musculus domesticus DNA, BAC clone: B6Ng01-158H09, 5' end.DH952404|Mus musculus domesticus DNA, BAC clone: B6Ng01-158H09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,632,816 - 111,633,528)(111,465,467 - 111,466,512)
sequence
gaattcccctgtgtttgctatgaaaaataaactgggggaaaatggagaat
gttaacaagaagttggaggaagatctaattgcatcttaaaggaaattctt
ataaaacagaaacagcaaagcagagagcctgaccaaccactgtcttacct
gtcagacagaaaatcctggtcaagcaactttcagcagccaaccactggca
ggcctctaagtaggactttaagacagactatgccgaatactgtatcctgc
atcccaaactgggactgcaagcaagcagttcatagagcaaagatggaaag
acttcagagaggaactccagaacacaagatgatagaatataacagagtcc
aagaatataaaaggtgcaggaagcagtaccctagttacagggaagcaaag
aatctctgttagtttcttacctcagttctggatctgctccagatagatca
acagagagatcacatcagacacaggagatacctgcaaaagactctagaca
gaatggaaaatcaacttaaaaagtgcataattaatagctgaaacaaatga
gggcaggggatgtagtgtgaaatatttttatgtacctggccatttaaatg
accttatgcccttcggtgtcagttggctcttagacttttgggaatgggag
tggatataaaaagccaacagaggcctagagtggaaagagtagtaataggg
ggagggaggagtc
gaattcagtatgggtttccaaactggagttagttgtatgtaagctggaca
gtgggaaagagacagagaggcactggctcaagttttaagtataggacaga
gtattggtttgaatattgactgtgacgagaactgcatcctttcaagacct
ctatctaaggagcctcccataattgactcttccagtagaggtggtaggag
cccatgtgacaaaacctatcagtcatcagattaaacgacttgagctgagc
ccatgctattgaggcgatagtttaaaagacacagcgaaaaagactaaatg
caacatggtcagtgtaattagcatcagtgcaggggatgctcagaagggga
gagtgagagagagatctgtgatatgctatagattgccgcactgattacta
tgaagacattaaaaggagatagtggcaatgatagtggatttatattgatt
ggttagaccataggagcccacgatctgagtaaattcaatacaccaacatt
gacttcttgctttagccagacattattcataaacacagatagaagatcag
aatgtgactctaacccaaagctcttagaggatgagacacctaaattccta
ttcaatggtcagtaaacatttgagcaggtcttggagtcatgccaacgttt
ccatttccaccatagagcatcatggtcacaggggccacaatagcctcaag
gtcgggaacgatctgtataatgaaggtgggcactgtggaacacgttaccc
cttgcagtgggatctgaatccagaagccaattgccgtctcagacaagcag
ataatgagcatttggacctgcttcctctgaacttgcacctgggacctgag
aagaagctggatatcgttatttctgatagcagaatccactgattggtttg
tcaatcatagctgacgtgagacacacattttatataggactctttgggaa
gatattgatcagataaggagacaaattttatcagaaaatatcttcagacc
caaataagtttgagattggagtaacgattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_111632816_111633528
seq2: B6Ng01-158H09.b_46_758 (reverse)

seq1  GACTCCTCCCTCCCCCTATTACTACTCTTTCCACTCTAGGCCTCTGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTCCCTCCCCCTATTACTACTCTTTCCACTCTAGGCCTCTGTTGG  50

seq1  CTTTTTATATCCACTCCCATTCCCAAAAGTCTAAGAGCCAACTGACACCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATATCCACTCCCATTCCCAAAAGTCTAAGAGCCAACTGACACCG  100

seq1  AAGGGCATAAGGTCATTTAAATGGCCAGGTACATAAAAATATTTCACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCATAAGGTCATTTAAATGGCCAGGTACATAAAAATATTTCACACT  150

seq1  ACATCCCCTGCCCTCATTTGTTTCAGCTATTAATTATGCACTTTTTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCCTGCCCTCATTTGTTTCAGCTATTAATTATGCACTTTTTAAGT  200

seq1  TGATTTTCCATTCTGTCTAGAGTCTTTTGCAGGTATCTCCTGTGTCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCCATTCTGTCTAGAGTCTTTTGCAGGTATCTCCTGTGTCTGAT  250

seq1  GTGATCTCTCTGTTGATCTATCTGGAGCAGATCCAGAACTGAGGTAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTCTCTGTTGATCTATCTGGAGCAGATCCAGAACTGAGGTAAGAA  300

seq1  ACTAACAGAGATTCTTTGCTTCCCTGTAACTAGGGTACTGCTTCCTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGAGATTCTTTGCTTCCCTGTAACTAGGGTACTGCTTCCTGCAC  350

seq1  CTTTTATATTCTTGGACTCTGTTATATTCTATCATCTTGTGTTCTGGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATATTCTTGGACTCTGTTATATTCTATCATCTTGTGTTCTGGAGT  400

seq1  TCCTCTCTGAAGTCTTTCCATCTTTGCTCTATGAACTGCTTGCTTGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTGAAGTCTTTCCATCTTTGCTCTATGAACTGCTTGCTTGCAGT  450

seq1  CCCAGTTTGGGATGCAGGATACAGTATTCGGCATAGTCTGTCTTAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTGGGATGCAGGATACAGTATTCGGCATAGTCTGTCTTAAAGTC  500

seq1  CTACTTAGAGGCCTGCCAGTGGTTGGCTGCTGAAAGTTGCTTGACCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTAGAGGCCTGCCAGTGGTTGGCTGCTGAAAGTTGCTTGACCAGGA  550

seq1  TTTTCTGTCTGACAGGTAAGACAGTGGTTGGTCAGGCTCTCTGCTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTCTGACAGGTAAGACAGTGGTTGGTCAGGCTCTCTGCTTTGCT  600

seq1  GTTTCTGTTTTATAAGAATTTCCTTTAAGATGCAATTAGATCTTCCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTTTTATAAGAATTTCCTTTAAGATGCAATTAGATCTTCCTCCA  650

seq1  ACTTCTTGTTAACATTCTCCATTTTCCCCCAGTTTATTTTTCATAGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTGTTAACATTCTCCATTTTCCCCCAGTTTATTTTTCATAGCAAA  700

seq1  CACAGGGGAATTC  713
      |||||||||||||
seq2  CACAGGGGAATTC  713

seq1: chr13_111465467_111466512
seq2: B6Ng01-158H09.g_67_1097

seq1  GAATTCAGTATGGGTTTCCAAACTGGAGTTAGTTGTATGTAAGCTGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATGGGTTTCCAAACTGGAGTTAGTTGTATGTAAGCTGGACA  50

seq1  GTGGGAAAGAGACAGAGAGGCACTGGCTCAAGTTTTAAGTATAGGACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAAGAGACAGAGAGGCACTGGCTCAAGTTTTAAGTATAGGACAGA  100

seq1  GTATTGGTTTGAATATTGACTGTGACGAGAACTGCATCCTTTCAAGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGTTTGAATATTGACTGTGACGAGAACTGCATCCTTTCAAGACCT  150

seq1  CTATCTAAGGAGCCTCCCATAATTGACTCTTCCAGTAGAGGTGGTAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTAAGGAGCCTCCCATAATTGACTCTTCCAGTAGAGGTGGTAGGAG  200

seq1  CCCATGTGACAAAACCTATCAGTCATCAGATTAAACGACTTGAGCTGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTGACAAAACCTATCAGTCATCAGATTAAACGACTTGAGCTGAGC  250

seq1  CCATGCTATTGAGGCGATAGTTTAAAAGACACAGCGAAAAAGACTAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTATTGAGGCGATAGTTTAAAAGACACAGCGAAAAAGACTAAATG  300

seq1  CAACATGGTCAGTGTAATTAGCATCAGTGCAGGGGATGCTCAGAAGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGGTCAGTGTAATTAGCATCAGTGCAGGGGATGCTCAGAAGGGGA  350

seq1  GAGTGAGAGAGAGATCTGTGATATGCTATAGATTGCCGCACTGATTACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGAGAGAGATCTGTGATATGCTATAGATTGCCGCACTGATTACTA  400

seq1  TGAAGACATTAAAAGGAGATAGTGGCAATGATAGTGGATTTATATTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACATTAAAAGGAGATAGTGGCAATGATAGTGGATTTATATTGATT  450

seq1  GGTTAGACCATAGGAGCCCACGATCTGAGTAAATTCAATACACCAACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGACCATAGGAGCCCACGATCTGAGTAAATTCAATACACCAACATT  500

seq1  GACTTCTTGCTTTAGCCAGACATTATTCATAAACACAGATAGAAGATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTTGCTTTAGCCAGACATTATTCATAAACACAGATAGAAGATCAG  550

seq1  AATGTGACTCTAACCCAAAGCTCTTAGAGGATGAGACACCTAAATTCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGACTCTAACCCAAAGCTCTTAGAGGATGAGACACCTAAATTCCTA  600

seq1  TTCAATGGTCAGTAAACATTTGAGCAGGTCTTGGAGTCATGCCAACGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGGTCAGTAAACATTTGAGCAGGTCTTGGAGTCATGCCAACGTTT  650

seq1  CCATTTCCACCATAGAGCATCATGGTCACAGGGGCCACAATAGCCTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCACCATAGAGCATCATGGTCACAGGGGCCACAATAGCCTCAAG  700

seq1  GTCGGGAACGATCTGTATAATGAAGGTGGGCACTGTGGAACACGTTACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGGAACGATCTGTATAATGAAGGTGGGCACTGTGGAACACGTTACCC  750

seq1  CTTGCAGTGGGATCTGAATCCAGAAGCCAATTGCCGTCTCAGACAAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGTGGGATCTGAATCCAGAAGCCAATTGCCGTCTCAGACAAGCAG  800

seq1  ATAATGAGCATTTGGACCTGCTTCCTCTGAACTTGCACCTGGGACCTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGCATTTGGACCTGCTTCCTCTGAACTTGCACCTGGGACCTGAG  850

seq1  AAGAAGCTGGATATCGTTATTTCTGATAGCAGAATCCACTGATTGGTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTGGATATCGTTATTTCTGATAGCAGAATCCACTGATTGGTTTG  900

seq1  TCAATCATAGCTGACGTGAGA-ACACAACAATTTTAATATAGGGACTCTT  949
      ||||||||||||||||||||| |||||     ||| ||||| ||||||||
seq2  TCAATCATAGCTGACGTGAGACACACA-----TTTTATATA-GGACTCTT  944

seq1  TGGGAAAGATATTGATCAGATAAAGGAGAACAAATTTTAACAGAAAATAT  999
      |||| |||||||||||||||| |||||| |||||||||| ||||||||||
seq2  TGGG-AAGATATTGATCAGAT-AAGGAG-ACAAATTTTATCAGAAAATAT  991

seq1  CTCAAGAACCCAAAATAAAGTTTGAAGATGGGGGAGTAACAGATTTA  1046
      ||  || |||||||   ||||||| ||||   |||||||| ||||||
seq2  CTTCAG-ACCCAAA--TAAGTTTG-AGAT--TGGAGTAAC-GATTTA  1031