BAC Information

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BAC

Clone NameB6Ng01-158K14
Chromosome13 (Build37)
Map Location 78,894,408 - 79,044,490
singlet/doubletdoublet
Overlap geneEG666883
Upstream gene1110033M05Rik, 1700013G10Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052
Downstream geneLOC666925
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158K14.bB6Ng01-158K14.g
ACCDH952551DH952552
length1,064961
definitionDH952551|Mus musculus domesticus DNA, BAC clone: B6Ng01-158K14, 5' end.DH952552|Mus musculus domesticus DNA, BAC clone: B6Ng01-158K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,043,426 - 79,044,490)(78,894,408 - 78,895,241)
sequence
gaattctctaactgcactttggtgacctttctttggaaatagttcaaagt
aaatagtttaagacagactagggaaaaaaggaaccctaaaaatacatgca
ctttttcttccttgttctatatgtgaaaactgaatgtaagccaagagtgc
tgactagaactaaaaatccagcattgagtagcaggacacgggcatcatga
cttgaaggccagactaagtttcgtaactatacgttatctgaaataataaa
taaaaaattataaaatcccaatggtttccttgttctataaagtgattggt
aatagttggttctctatcttgacacccctctgaacctatatcctttccta
catagctctcaaatggaaaatctagctttgactagcaatgtacaaaattc
cccaatttctcatgttaaaatgagtactcacatgtgtttccttagtttca
tttttattaaaacatcaatttaggagattgctccaattatactttcaatg
aacaaaaatatatttgcaaacaattatttcagcatagttcctcttattat
tcttaaaaagaatggtcatgatatgacaaatgataggtgtatggacttga
agacttactttgaatactttctacactatgcattttacaaaattatatca
aataattgtttatacttatcccaagaaaattcttaatatgtcgatgaaat
gcgaatgaatttagaaatatattgaagttgattgcactccatgcctttat
ccaaaagaggggttataacatacacaaacaatacatatatatccttccat
gtacaggaaagaaatataactgccttgagaaacttagaaatctaccataa
aattaaagttgtattcactgtccaaaatgctcagcccacttcacaccaag
aagaaaactaaaggcttaagtgagtacaatgaatcactatttacatacta
tcattttcctatgtaaagagctaccctgtgagtgctatacactgtcaata
gttctaatagtatttctgcctgtaaatgcttgagtccactttcagttaca
atttgttgtgtgtg
gaattctccttttaatgcagaacattctgtgcttatcatttttgaagcaa
gtaaaaaatcacaaatgagatctattgatttgtaagttgaaaatcaaggt
cctaggactctgtctccattcaactgaaaccatcctggtatacagaagaa
tctttaagccttaaatacttaaaactcactactgtcatacaaactatttt
agtagttcctgtttctttctaatagttttatttattctttgagaatttca
tacatgtataccattatttctatttatttatttatttatttatttattta
tttatttatttatttattgaaagtttgtcctggaggttttttttttaatt
tttttaattaggtattttcttcattttcatttcaaatgctatccctaaag
tcccccagaccctcccccacccactcccacctcttggccctggcattccc
ccatattgagtcatataaaatttgcaagaccaaggggcccctcttcccaa
tgatggccgcctaggccatcttctgatacatatgcagctagagacacaag
ctctggggatactggttagttcatattgttgttctacctatagggttgca
gaccctttcagctccttgggtactttctctagctcctccattgggggccc
tatgttccatccaatacctgactgtgagcatcctcttctgtgtttgccag
gcaccagcatagcctcacaagagacagctatatcagggtcttttcagcaa
aatcttgctggtgtatgcaatggtgtcagcgtttggaggctgattctggg
gtggatccctggatatggcagtctctagatggtctatccttttatcacag
ctccaaactttgtctctgtaactacttccatgggtgtttttgttcccaat
cctaagacgggcaaagtgttcacactttgggcttcgtttttcttgacttt
catgtgttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79043426_79044490
seq2: B6Ng01-158K14.b_52_1115 (reverse)

seq1  CACACAC----ACTTGTAACTGAAAGTGGACTCAAGCATTTACAGGCAGA  46
      |||||||    | |||||||||||||||||||||||||||||||||||||
seq2  CACACACAACAAATTGTAACTGAAAGTGGACTCAAGCATTTACAGGCAGA  50

seq1  AATACTAATTAGAACTAATTGACAGTGTTATAGCACTCACCAGGGTAGCT  96
      |||||| ||||||||| |||||||||| ||||||||||| ||||||||||
seq2  AATACT-ATTAGAACT-ATTGACAGTG-TATAGCACTCA-CAGGGTAGCT  96

seq1  CTTTACATAGGAAAATGATAGTTATGTAAATAGTGATTCATTGTACTCAC  146
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTTACATAGGAAAATGATAG-TATGTAAATAGTGATTCATTGTACTCAC  145

seq1  TTAAGCCTTTAGTTTTCTTCTTGGTGTGAAGTGGGCTGAGCATTTTGGAC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTTTAGTTTTCTTCTTGGTGTGAAGTGGGCTGAGCATTTTGGAC  195

seq1  AGTGAATACAACTTTAATTTTATGGTAGATTTCTAAGTTTCTCAAGGCAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATACAACTTTAATTTTATGGTAGATTTCTAAGTTTCTCAAGGCAG  245

seq1  TTATATTTCTTTCCTGTACATGGAAGGATATATATGTATTGTTTGTGTAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTCTTTCCTGTACATGGAAGGATATATATGTATTGTTTGTGTAT  295

seq1  GTTATAACCCCTCTTTTGGATAAAGGCATGGAGTGCAATCAACTTCAATA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAACCCCTCTTTTGGATAAAGGCATGGAGTGCAATCAACTTCAATA  345

seq1  TATTTCTAAATTCATTCGCATTTCATCGACATATTAAGAATTTTCTTGGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAAATTCATTCGCATTTCATCGACATATTAAGAATTTTCTTGGG  395

seq1  ATAAGTATAAACAATTATTTGATATAATTTTGTAAAATGCATAGTGTAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTATAAACAATTATTTGATATAATTTTGTAAAATGCATAGTGTAGA  445

seq1  AAGTATTCAAAGTAAGTCTTCAAGTCCATACACCTATCATTTGTCATATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTCAAAGTAAGTCTTCAAGTCCATACACCTATCATTTGTCATATC  495

seq1  ATGACCATTCTTTTTAAGAATAATAAGAGGAACTATGCTGAAATAATTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCATTCTTTTTAAGAATAATAAGAGGAACTATGCTGAAATAATTGT  545

seq1  TTGCAAATATATTTTTGTTCATTGAAAGTATAATTGGAGCAATCTCCTAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATATATTTTTGTTCATTGAAAGTATAATTGGAGCAATCTCCTAA  595

seq1  ATTGATGTTTTAATAAAAATGAAACTAAGGAAACACATGTGAGTACTCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTTTTAATAAAAATGAAACTAAGGAAACACATGTGAGTACTCAT  645

seq1  TTTAACATGAGAAATTGGGGAATTTTGTACATTGCTAGTCAAAGCTAGAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACATGAGAAATTGGGGAATTTTGTACATTGCTAGTCAAAGCTAGAT  695

seq1  TTTCCATTTGAGAGCTATGTAGGAAAGGATATAGGTTCAGAGGGGTGTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTTGAGAGCTATGTAGGAAAGGATATAGGTTCAGAGGGGTGTCA  745

seq1  AGATAGAGAACCAACTATTACCAATCACTTTATAGAACAAGGAAACCATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAGAACCAACTATTACCAATCACTTTATAGAACAAGGAAACCATT  795

seq1  GGGATTTTATAATTTTTTATTTATTATTTCAGATAACGTATAGTTACGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTTATAATTTTTTATTTATTATTTCAGATAACGTATAGTTACGAA  845

seq1  ACTTAGTCTGGCCTTCAAGTCATGATGCCCGTGTCCTGCTACTCAATGCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTCTGGCCTTCAAGTCATGATGCCCGTGTCCTGCTACTCAATGCT  895

seq1  GGATTTTTAGTTCTAGTCAGCACTCTTGGCTTACATTCAGTTTTCACATA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTAGTTCTAGTCAGCACTCTTGGCTTACATTCAGTTTTCACATA  945

seq1  TAGAACAAGGAAGAAAAAGTGCATGTATTTTTAGGGTTCCTTTTTTCCCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAAGGAAGAAAAAGTGCATGTATTTTTAGGGTTCCTTTTTTCCCT  995

seq1  AGTCTGTCTTAAACTATTTACTTTGAACTATTTCCAAAGAAAGGTCACCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCTTAAACTATTTACTTTGAACTATTTCCAAAGAAAGGTCACCA  1045

seq1  AAGTGCAGTTAGAGAATTC  1065
      |||||||||||||||||||
seq2  AAGTGCAGTTAGAGAATTC  1064

seq1: chr13_78894408_78895241
seq2: B6Ng01-158K14.g_71_904

seq1  GAATTCTCCTTTTAATGCAGAACATTCTGTGCTTATCATTTTTGAAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTTAATGCAGAACATTCTGTGCTTATCATTTTTGAAGCAA  50

seq1  GTAAAAAATCACAAATGAGATCTATTGATTTGTAAGTTGAAAATCAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAATCACAAATGAGATCTATTGATTTGTAAGTTGAAAATCAAGGT  100

seq1  CCTAGGACTCTGTCTCCATTCAACTGAAACCATCCTGGTATACAGAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGACTCTGTCTCCATTCAACTGAAACCATCCTGGTATACAGAAGAA  150

seq1  TCTTTAAGCCTTAAATACTTAAAACTCACTACTGTCATACAAACTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGCCTTAAATACTTAAAACTCACTACTGTCATACAAACTATTTT  200

seq1  AGTAGTTCCTGTTTCTTTCTAATAGTTTTATTTATTCTTTGAGAATTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTCCTGTTTCTTTCTAATAGTTTTATTTATTCTTTGAGAATTTCA  250

seq1  TACATGTATACCATTATTTCTATTTATTTATTTATTTATTTATTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTATACCATTATTTCTATTTATTTATTTATTTATTTATTTATTTA  300

seq1  TTTATTTATTTATTTATTGAAAGTTTGTCCTGGAGGTTTTTTTTTTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTGAAAGTTTGTCCTGGAGGTTTTTTTTTTAATT  350

seq1  TTTTTAATTAGGTATTTTCTTCATTTTCATTTCAAATGCTATCCCTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTAGGTATTTTCTTCATTTTCATTTCAAATGCTATCCCTAAAG  400

seq1  TCCCCCAGACCCTCCCCCACCCACTCCCACCTCTTGGCCCTGGCATTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCAGACCCTCCCCCACCCACTCCCACCTCTTGGCCCTGGCATTCCC  450

seq1  CCATATTGAGTCATATAAAATTTGCAAGACCAAGGGGCCCCTCTTCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTGAGTCATATAAAATTTGCAAGACCAAGGGGCCCCTCTTCCCAA  500

seq1  TGATGGCCGCCTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCCGCCTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAG  550

seq1  CTCTGGGGATACTGGTTAGTTCATATTGTTGTTCTACCTATAGGGTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGATACTGGTTAGTTCATATTGTTGTTCTACCTATAGGGTTGCA  600

seq1  GACCCTTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTTCAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCC  650

seq1  TATGTTCCATCCAATACCTGACTGTGAGCATCCTCTTCTGTGTTTGCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCCATCCAATACCTGACTGTGAGCATCCTCTTCTGTGTTTGCCAG  700

seq1  GCACCAGCATAGCCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAA  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCACCAGCATAGCCTCACAAGAGACAGCTATATCAGGGTCTTTTCAGCAA  750

seq1  AATCTTGCTGGTGTATGCAATGGTGTCAGCGTTTGGAGGCTGATTCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGCTGGTGTATGCAATGGTGTCAGCGTTTGGAGGCTGATTCTGGG  800

seq1  GTGGATCCCTGGATATGGCAGTCTCTAGATGGTC  834
      ||||||||||||||||||||||||||||||||||
seq2  GTGGATCCCTGGATATGGCAGTCTCTAGATGGTC  834