BAC Information

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BAC

Clone NameB6Ng01-159C05
Chromosome13 (Build37)
Map Location 67,394,031 - 67,509,341
singlet/doubletdoublet
Overlap geneZfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459
Upstream geneLOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458
Downstream geneC330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159C05.bB6Ng01-159C05.g
ACCDH952893DH952894
length1,0661,000
definitionDH952893|Mus musculus domesticus DNA, BAC clone: B6Ng01-159C05, 5' end.DH952894|Mus musculus domesticus DNA, BAC clone: B6Ng01-159C05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,394,031 - 67,394,703)(67,508,348 - 67,509,341)
sequence
gaattctcttatgtatcgtaagtaatgatagaaagtgaaagacttttcca
catacttcacacttgcatggtttctcttctgtagtaagtttcttatgttc
ggaaagccttgatggataattgaagcccttgctacacatttcagcattgt
agggattccctcctgtatgaattttcttatgtttggaaagtcttgatggg
taatggaaggccttaccacaaacttcacatttgtatggtttctctcttgt
atgaattcgattgtgatgagaaagttttgatgggatattgaaggccttgc
cacatacttcacacttgtagggtttttctccagtatgaattctcttgtgt
acagaaagtattgatggacaatggaaggccttgccacatacttcacactt
gtagggtttctctcctgtatgagttttactatttttggaaagtcttgatg
gagaaccgaaggccttgccacatatgtcacacttgtagggtttctctcct
gtgtgaattatcttgtgtttatgaagagatgataaaaaacagaaggcctt
tccacatacttcacacttgtatggtttctcttctgtatgaattttcttat
ggtttgaaagtcttgatggatagtcgaaagccttgccacatacttcacac
ttgtagggattttcttctgtatgaactatcttgtgtttagaaagtctgga
tggataatagaaatccttgccacatacttcacacttgtatggtttttctc
ctgtgtgagttttcttatgtctggaaagttttgatggataatggaaggac
ttatcgcagttttcacatttgtagggttttttccctgtatgaacaatttt
gtgttgagaaagtaataatggataatggaaggccttgccacatatatcac
acttgcagagatctctttgtatgaattattttatgtttagaaagtatgga
tgggtaatggaaaggtcttgccacaaacttcacatttgtaggcttttctc
ctgtatgattattttatgttagaagatggatgggtaatgaggtcttgcca
caactcacattgtagg
gaattcattctggggagaaatgttacaagtgcaaaaattgtggatacgct
tcttatgacccttcattccttgagcagcatcaaaaaattaattgtaggga
gaaatgctacaagtgtgaagactgtcacaaagcctttcatcatcagccct
taggatacacaagagagttcatactggagagaaacctttcaaatgtgaaa
agtgtggcagatgttttagggtatctaaatcccttaagcaacataaaaaa
atccacttaaaaaaggaaccctacacctgccaagactgtggcagatcttt
ttcaaattatttgagacttagacgacatgaagtgattcattctgaatata
atcctcacaagtgtgaaaaatgtgacaaaaggttttcccattctgcaaat
cttcggaaccatcaaagagttcatagtagagagagaccttgcaagtgtta
agcatgtcaccaagccttttaaatatcgttcaaccctttcgaaacacaag
aacactcatgcaagagagaaatcctaccagtgtgaagatgtggtatgatg
gtttgtatatgcttggctcagggagttgcagtattaggaggtgtggcctt
gttggagtaagtgtgtcaatgtgggtgtgggggtgggcgctaataccctt
gtcctacaagccagtcttgtagcagccttcagatgaagatgtacaactct
tagctcttcctgcaccatgtctgcctggatgctgccatgctcctgccttg
atgataatagactaagtctttaatctgtaagcaagcctctattaagtgtt
gttcttacaagagttgctttggttatggtgtctgttcacagcaataaacc
cctagacatatgggaagtgtgataaagcctattaattcttgatagcctta
ctcacacaggatagttcataatggagtggagtctatggaaattttaaata
ttatcttctccactcttaaaacaaaattggtgctgcccgttttattcagc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67394031_67394703
seq2: B6Ng01-159C05.b_453_1114

seq1  GGTTTCTCTCCTGTATGAGTTTTACTATTTTTGGAAAGTCTTGATGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTCCTGTATGAGTTTTACTATTTTTGGAAAGTCTTGATGGAGA  50

seq1  ACCGAAGGCCTTGCCACATATGTCACACTTGTAGGGTTTCTCTCCTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAAGGCCTTGCCACATATGTCACACTTGTAGGGTTTCTCTCCTGTGT  100

seq1  GAATTATCTTGTGTTTATGAAGAGATGATAAAAAACAGAAGGCCTTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATCTTGTGTTTATGAAGAGATGATAAAAAACAGAAGGCCTTTCCA  150

seq1  CATACTTCACACTTGTATGGTTTCTCTTCTGTATGAATTTTCTTATGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTCACACTTGTATGGTTTCTCTTCTGTATGAATTTTCTTATGGTT  200

seq1  TGAAAGTCTTGATGGATAGTCGAAAGCCTTGCCACATACTTCACACTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTCTTGATGGATAGTCGAAAGCCTTGCCACATACTTCACACTTGT  250

seq1  AGGGATTTTCTTCTGTATGAACTATCTTGTGTTTAGAAAGTCTGGATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTTCTTCTGTATGAACTATCTTGTGTTTAGAAAGTCTGGATGGA  300

seq1  TAATAGAAATCCTTGCCACATACTTCACACTTGTATGGTTTTTCTCCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAAATCCTTGCCACATACTTCACACTTGTATGGTTTTTCTCCTGT  350

seq1  GTGAGTTTTCTTATGTCTGGAAAGTTTTGATGGATAATGGAAGGACTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTTCTTATGTCTGGAAAGTTTTGATGGATAATGGAAGGACTTAT  400

seq1  CGCAGTTTTCACATTTGTAGGGTTTTTTCCCTGTATGAACAATTTTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGTTTTCACATTTGTAGGGTTTTTTCCCTGTATGAACAATTTTGTGT  450

seq1  TGAGAAAGTAATAATGGATAATGGAAGGCCTTGCCACATATATCACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGTAATAATGGATAATGGAAGGCCTTGCCACATATATCACACTT  500

seq1  GCAGAGATTCTCTTTTGTATGAATTATTTTATGTTTAGAAAGTATGGATG  550
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  GCAGAGA-TCTC-TTTGTATGAATTATTTTATGTTTAGAAAGTATGGATG  548

seq1  GGTAATGG-AAGGTCTTGCCACAAACTTCACATTTGTAGGGCTTTTCTCC  599
      |||||||| ||||||||||||||||||||||||||||| |||||||||||
seq2  GGTAATGGAAAGGTCTTGCCACAAACTTCACATTTGTA-GGCTTTTCTCC  597

seq1  TGTATGAATTATTTTATGTTTAGAAAGTATGGATGGGTAATGGAAGGTCT  649
      |||||| ||||||||||| ||||||   ||||||||||||||  ||||||
seq2  TGTATG-ATTATTTTATG-TTAGAA--GATGGATGGGTAATG--AGGTCT  641

seq1  TGCCACAAACTTCACATTTGTAGG  673
      ||||||||   ||||| |||||||
seq2  TGCCACAA--CTCACA-TTGTAGG  662

seq1: chr13_67508348_67509341
seq2: B6Ng01-159C05.g_80_1066 (reverse)

seq1  GCTGACATAAAACTGGGCAGCA-CAGATTTGTTTTAAGAGTGGAAGAAGA  49
      ||||| ||||||| |||||||| ||  |||||||||||||||| ||||||
seq2  GCTGA-ATAAAAC-GGGCAGCACCAATTTTGTTTTAAGAGTGG-AGAAGA  47

seq1  TTAAATATTTTAAAAATTCATAGGACTTCACTCCATTATGAACTATCCTG  99
      |  ||||||| |||  | |||| |||| ||||||||||||||||||||||
seq2  T--AATATTTAAAATTTCCATA-GACTCCACTCCATTATGAACTATCCTG  94

seq1  TGTTGAGTAAGGCTATCAAGATTAACTAGGCTTTATCACACTTCCCATAT  149
      || |||||||||||||||||| | | ||||||||||||||||||||||||
seq2  TG-TGAGTAAGGCTATCAAGAATTAATAGGCTTTATCACACTTCCCATAT  143

seq1  GTCTTAGGGGTTTATTGCTGTGAACAGACACCATAACCAAAGCAACTCTT  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTC-TAGGGGTTTATTGCTGTGAACAGACACCATAACCAAAGCAACTCTT  192

seq1  GTAAGAACAACACTTAATAGAGGCTTGCTTACAGATTAAAGACTTAGTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAACAACACTTAATAGAGGCTTGCTTACAGATTAAAGACTTAGTCT  242

seq1  ATTATCATCAAGGCAGGAGCATGGCAGCATCCAGGCAGACATGGTGCAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATCAAGGCAGGAGCATGGCAGCATCCAGGCAGACATGGTGCAGG  292

seq1  AAGAGCTAAGAGTTGTACATCTTCATCTGAAGGCTGCTACAAGACTGGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTAAGAGTTGTACATCTTCATCTGAAGGCTGCTACAAGACTGGCT  342

seq1  TGTAGGACAAGGGTATTAGCGCCCACCCCCACACCCACATTGACACACTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGACAAGGGTATTAGCGCCCACCCCCACACCCACATTGACACACTT  392

seq1  ACTCCAACAAGGCCACACCTCCTAATACTGCAACTCCCTGAGCCAAGCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAACAAGGCCACACCTCCTAATACTGCAACTCCCTGAGCCAAGCAT  442

seq1  ATACAAACCATCATACCACATCTTCACACTGGTAGGATTTCTCTCTTGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACCATCATACCACATCTTCACACTGGTAGGATTTCTCTCTTGCA  492

seq1  TGAGTGTTCTTGTGTTTCGAAAGGGTTGAACGATATTTAAAAGGCTTGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTTCTTGTGTTTCGAAAGGGTTGAACGATATTTAAAAGGCTTGGT  542

seq1  GACATGCTTAACACTTGCAAGGTCTCTCTCTACTATGAACTCTTTGATGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCTTAACACTTGCAAGGTCTCTCTCTACTATGAACTCTTTGATGG  592

seq1  TTCCGAAGATTTGCAGAATGGGAAAACCTTTTGTCACATTTTTCACACTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGAAGATTTGCAGAATGGGAAAACCTTTTGTCACATTTTTCACACTT  642

seq1  GTGAGGATTATATTCAGAATGAATCACTTCATGTCGTCTAAGTCTCAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGATTATATTCAGAATGAATCACTTCATGTCGTCTAAGTCTCAAAT  692

seq1  AATTTGAAAAAGATCTGCCACAGTCTTGGCAGGTGTAGGGTTCCTTTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAAAAAGATCTGCCACAGTCTTGGCAGGTGTAGGGTTCCTTTTTT  742

seq1  AAGTGGATTTTTTTATGTTGCTTAAGGGATTTAGATACCCTAAAACATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGATTTTTTTATGTTGCTTAAGGGATTTAGATACCCTAAAACATCT  792

seq1  GCCACACTTTTCACATTTGAAAGGTTTCTCTCCAGTATGAACTCTCTTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACTTTTCACATTTGAAAGGTTTCTCTCCAGTATGAACTCTCTTGT  842

seq1  GTATCCTAAGGGCTGATGATGAAAGGCTTTGTGACAGTCTTCACACTTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTAAGGGCTGATGATGAAAGGCTTTGTGACAGTCTTCACACTTGT  892

seq1  AGCATTTCTCCCTACAATTAATTTTTTGATGCTGCTCAAGGAATGAAGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCTCCCTACAATTAATTTTTTGATGCTGCTCAAGGAATGAAGGG  942

seq1  TCATAAGAAGCGTATCCACAATTTTTGCACTTGTAACATTTCTCC  994
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGAAGCGTATCCACAATTTTTGCACTTGTAACATTTCTCC  987