BAC Information

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BAC

Clone NameB6Ng01-159L19
Chromosome4 (Build37)13 (Build37)
Map Location 150,226,974 - 150,227,148113,061,767 - 113,062,705
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSpsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1, LOC677027
Downstream geneErrfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159L19.bB6Ng01-159L19.g
ACCDH953311DH953312
length263940
definitionDH953311|Mus musculus domesticus DNA, BAC clone: B6Ng01-159L19, 5' end.DH953312|Mus musculus domesticus DNA, BAC clone: B6Ng01-159L19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(150,226,974 - 150,227,148)(113,061,767 - 113,062,705)
sequence
cattttctctaaagttatcacagaagctttgcatgcgtgcgggtgtgtgt
gtgtgtgtgtgtgtgtgcatgtgtttctgtttgtatgttgtgtgtctatg
tgtatgtgtgtgttgtgtatttctctgtgtgtgtctgtgtgtgttgtgta
tctgtgtgtatgtctatgtgtgtattagtgtgtgtctatgtctgtgtggg
tctttgcgtctgtctatgtgtctgtattgtgtgtatgtgtatatatgtct
gtgtgtgtgtgtg
gaattcatgggggaactgggtatcatgggggatgtgaactcgtatgccaa
gacggcacacccaaggcagacctcatcagggcagaaactgcaaaactggg
ggcacagacagtggcagtggccaggtcacacactggcagccaagataggt
gggaagggggctacagagaagggggtgcgggcaagtctgcagagagcaag
aaagcaaagaaggctgtggatgtaaggaaactgaaggtgcttttgccggg
aagccgagaacggaaaagaaaccattaaaactatgttttatttcgtaaag
atcaaataatttgggacagcttatttgaataaagaccaaccaaagatcca
ataagaggggaaagcgaaagaaaaacctaattcttgggttttgaacatgg
atgttcacaactcctgaaatctctcgggattctgttctttcaaacataaa
ctcaactgtgcatgcgggcttaggtctgcaatctcagtaatgaacagaat
attcctctagggggagccatgcccttgttggtttatttagagttaatccc
tctgggcaggtcaggggccggcctaaggaaccactcctatgaaggcagcc
ccccccaccccacccccacacacacacacacaaggttttcacccctctag
agcagcccccccaccagccgcccccaggttagccagggaaggcctgcaaa
atttttctgagttctgtaatgactccctttgtcttttcttctgtcatttt
tttttctcagaggctgggccacagctacatacactttcagactccctaag
gttggggtctcccaactctttctagtggatgtgtgtagtgtagaaaggct
taactgatggtgcccaactctgccatcttcttgactctctaacatcctgg
gctgagacatcttcccagagttccctatgataataatcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150226974_150227148
seq2: B6Ng01-159L19.b_95_315 (reverse)

seq1  CACACACACACACATACAAACAAGCATATACAC---ATATACATACATGC  47
      |||||||||||||| ||| | |  || ||||||   ||| | | ||||  
seq2  CACACACACACACAGACATATATACACATACACACAATACAGACACATAG  50

seq1  ACATA----------CACACACATATATGCACATACAAATAGGCACATAC  87
      ||| |          |||||| | |||  |||| || ||||  |||||| 
seq2  ACAGACGCAAAGACCCACACAGACATAGACACACACTAATACACACATAG  100

seq1  ACAT---------TAC-------------ATACATGGAGGGAAGGACAC-  114
      ||||         |||             | |||   || |||  |||| 
seq2  ACATACACACAGATACACAACACACACAGACACACACAGAGAAATACACA  150

seq1  ACATGCACATACATACATGCACACACACACACACACGGAGGGA---GGAC  161
      |||  |||||||| | |  |||||| ||| ||| || ||   |   | ||
seq2  ACACACACATACACATAGACACACA-ACATACAAACAGAAACACATGCAC  199

seq1  ACATAGACACACAC--------  175
      ||| | ||||||||        
seq2  ACACACACACACACACACACAC  221

seq1: chr13_113061767_113062705
seq2: B6Ng01-159L19.g_71_1010

seq1  GAATTCATGGGGGAACTGGGTATCATGGGGGATGTGAACTCGTATGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGGGAACTGGGTATCATGGGGGATGTGAACTCGTATGCCAA  50

seq1  GACGGCACACCCAAGGCAGACCTCATCAGGGCAGAAACTGCAAAACTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGCACACCCAAGGCAGACCTCATCAGGGCAGAAACTGCAAAACTGGG  100

seq1  GGCACAGACAGTGGCAGTGGCCAGGTCACACACTGGCAGCCAAGATAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGACAGTGGCAGTGGCCAGGTCACACACTGGCAGCCAAGATAGGT  150

seq1  GGGAAGGGGGCTACAGAGAAGGGGGTGCGGGCAAGTCTGCAGAGAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGGGGCTACAGAGAAGGGGGTGCGGGCAAGTCTGCAGAGAGCAAG  200

seq1  AAAGCAAAGAAGGCTGTGGATGTAAGGAAACTGAAGGTGCTTTTGCCGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAGAAGGCTGTGGATGTAAGGAAACTGAAGGTGCTTTTGCCGGG  250

seq1  AAGCCGAGAACGGAAAAGAAACCATTAAAACTATGTTTTATTTCGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCGAGAACGGAAAAGAAACCATTAAAACTATGTTTTATTTCGTAAAG  300

seq1  ATCAAATAATTTGGGACAGCTTATTTGAATAAAGACCAACCAAAGATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATAATTTGGGACAGCTTATTTGAATAAAGACCAACCAAAGATCCA  350

seq1  ATAAGAGGGGAAAGCGAAAGAAAAACCTAATTCTTGGGTTTTGAACATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGGGGAAAGCGAAAGAAAAACCTAATTCTTGGGTTTTGAACATGG  400

seq1  ATGTTCACAACTCCTGAAATCTCTCGGGATTCTGTTCTTTCAAACATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCACAACTCCTGAAATCTCTCGGGATTCTGTTCTTTCAAACATAAA  450

seq1  CTCAACTGTGCATGCGGGCTTAGGTCTGCAATCTCAGTAATGAACAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTGTGCATGCGGGCTTAGGTCTGCAATCTCAGTAATGAACAGAAT  500

seq1  ATTCCTCTAGGGGGAGCCATGCCCTTGTTGGTTTATTTAGAGTTAATCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCTAGGGGGAGCCATGCCCTTGTTGGTTTATTTAGAGTTAATCCC  550

seq1  TCTGGGCAGGTCAGGGGCCGGCCTAAGGAACCACTCCTATGAAGGCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCAGGTCAGGGGCCGGCCTAAGGAACCACTCCTATGAAGGCAGCC  600

seq1  CCCCCCACCCCACCCCCACACACACACACACAAGGTTTTCACCCCTCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCCACCCCCACACACACACACACAAGGTTTTCACCCCTCTAG  650

seq1  AGCAGCCCCCCCACCAGCCGCCCCCAGGTTAGCCAGGGAAGGCCTGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCCCCCCACCAGCCGCCCCCAGGTTAGCCAGGGAAGGCCTGCAAA  700

seq1  A-TTTTCTGAGTTCTGTAATGACTCCCTTTGTCTTTTCTTCTGTCA--TT  747
      | ||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  ATTTTTCTGAGTTCTGTAATGACTCCCTTTGTCTTTTCTTCTGTCATTTT  750

seq1  TTTTTCTCAGAGGCT-GGCCACAGCTACATACACTTTCAGACTCCCTAAG  796
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCAGAGGCTGGGCCACAGCTACATACACTTTCAGACTCCCTAAG  800

seq1  GTTTGGGTCTTCCCCACTCTTTCTAGTGGATGTGTGTAGGTGTTGAAAGG  846
      ||| ||||| |||| ||||||||||||||||||||||| |||| ||||||
seq2  GTTGGGGTC-TCCCAACTCTTTCTAGTGGATGTGTGTA-GTGTAGAAAGG  848

seq1  CATAACTGATGGTGCCCAACCTCTGCCATC-TCCTGACTCTCTAACATCC  895
      | ||||||||||||||||| |||||||||| || ||||||||||||||||
seq2  CTTAACTGATGGTGCCCAA-CTCTGCCATCTTCTTGACTCTCTAACATCC  897

seq1  TTGGCTGAGACATCCTCCCCAGAGGTCCCTATGATAATAATCCA  939
      | ||||||||||| || ||||||| |||||||||||||||||||
seq2  TGGGCTGAGACAT-CTTCCCAGAGTTCCCTATGATAATAATCCA  940