BAC Information

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BAC

Clone NameB6Ng01-160N18
Chromosome13 (Build37)
Map Location 99,925,806 - 100,061,118
singlet/doubletdoublet
Overlap geneZfp366
Upstream geneRgnef, LOC667703, Utp15, Ankra2, EG667718, Btf3, Foxd1, LOC100039827, LOC100039665, LOC100039854, LOC218501, Tmem174, Tmem171, LOC669675, Fcho2, Tnpo1, EG432798, LOC100039771, 1700024P04Rik, LOC100039967, LOC100039797
Downstream genePtcd2, Mrps27, Mtap1b, Cartpt, Mccc2, Bdp1, Serf1, Smn1, Naip2, Birc1-rs1, Naip5, Birc1c-ps1, Birc1f
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160N18.bB6Ng01-160N18.g
ACCDH954124DH954125
length970354
definitionDH954124|Mus musculus domesticus DNA, BAC clone: B6Ng01-160N18, 5' end.DH954125|Mus musculus domesticus DNA, BAC clone: B6Ng01-160N18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,925,806 - 99,926,777)(100,060,765 - 100,061,118)
sequence
gaattctgtcccctctcccaggtctcctgagtgagtacctagcccacagt
cagttgtccacgttctgggaacattctagaaacaaacaccttggtctgtt
tggattcctttagcacagaattatccccgagaaatggagacactcagcag
gttagtgatgagctcttgaaggagagagcatgatgtaagatttgagcagg
taactgaggccatttggatttgaagaatggaagtacagttggagtaggtc
aagagcagtaggcatacaggtgggatggttatgcaaagcaacgtatctac
catcatagagaagaaacaaggagtggcagaccccaatccctagtttcttc
ctctagagtcttaccacttcctgaattcctgccatgagcatcattttgac
ttgagctggtttgaatagatgaatagcccttgcaatcaagtgcccaaatt
agattaggagacaaagtgagatcaaattaatgcatagtaagaacgcacaa
gagctccaaggcaaaggccgatgaaaaccttgatctgtctacacttctat
tttccaaacttggaagataggttcaaataacctgctgcactgcctctgcc
caccacacttgagacttcacagcctgcgtctgttcatcctcagctttggt
cactagcagcccagaagcctatcctctgctctgttgttccagactaggat
ctttatctcttcacttgatgtccttgatgtctattttctcaaggggcctg
ggcctctgtctcgtcttccttctggcgtagagctttcaagattggcagtg
ccattgcagttgctcttgaggacatttccggctgcctactgagctccttc
ctgacattgattacctcatatatttgaaccaggggtggcactacttgaga
aagatagaggttgtggccttgttgaagagtgtggccttgttggaaggagg
tgttggccttgttggaggag
tcccaggacacctgagctccgactcttgctccttcccctttaggtgaagc
agtagttccactctacggtcggccagacagggaacaggagcagagctctg
cttcccaatgtaccgctacacatcaagaacccagacttaccacacagatt
cagaaaaattgtgtgccagagtgcccgcaggtgcagttaccatgtgttgg
catctgctttcagaagcctggagaagaaatcaatgacccagtgaaaaaaa
ttaatttgctactgcctaccagcttggaggaccctgggcaccatgtgatg
tagggagtggcggctagggggctctctggggcggggtggtggtgatggag
agtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_99925806_99926777
seq2: B6Ng01-160N18.b_45_1014

seq1  GAATTCTGTCCCCTCTCCCAGGTCTCCTGAGTGAGTACCTAGCCCACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCCCCTCTCCCAGGTCTCCTGAGTGAGTACCTAGCCCACAGT  50

seq1  CAGTTGTCCACGTTCTGGGAACATTCTAGAAACAAACACCTTGGTCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTCCACGTTCTGGGAACATTCTAGAAACAAACACCTTGGTCTGTT  100

seq1  TGGATTCCTTTAGCACAGAATTATCCCCGAGAAATGGAGACACTCAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCCTTTAGCACAGAATTATCCCCGAGAAATGGAGACACTCAGCAG  150

seq1  GTTAGTGATGAGCTCTTGAAGGAGAGAGCATGATGTAAGATTTGAGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGATGAGCTCTTGAAGGAGAGAGCATGATGTAAGATTTGAGCAGG  200

seq1  TAACTGAGGCCATTTGGATTTGAAGAATGGAAGTACAGTTGGAGTAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGGCCATTTGGATTTGAAGAATGGAAGTACAGTTGGAGTAGGTC  250

seq1  AAGAGCAGTAGGCATACAGGTGGGATGGTTATGCAAAGCAACGTATCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGTAGGCATACAGGTGGGATGGTTATGCAAAGCAACGTATCTAC  300

seq1  CATCATAGAGAAGAAACAAGGAGTGGCAGACCCCAATCCCTAGTTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAGAGAAGAAACAAGGAGTGGCAGACCCCAATCCCTAGTTTCTTC  350

seq1  CTCTAGAGTCTTACCACTTCCTGAATTCCTGCCATGAGCATCATTTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGAGTCTTACCACTTCCTGAATTCCTGCCATGAGCATCATTTTGAC  400

seq1  TTGAGCTGGTTTGAATAGATGAATAGCCCTTGCAATCAAGTGCCCAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTGGTTTGAATAGATGAATAGCCCTTGCAATCAAGTGCCCAAATT  450

seq1  AGATTAGGAGACAAAGTGAGATCAAATTAATGCATAGTAAGAACGCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGGAGACAAAGTGAGATCAAATTAATGCATAGTAAGAACGCACAA  500

seq1  GAGCTCCAAGGCAAAGGCCGATGAAAACCTTGATCTGTCTACACTTCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCAAGGCAAAGGCCGATGAAAACCTTGATCTGTCTACACTTCTAT  550

seq1  TTTCCAAACTTGGAAGATAGGTTCAAATAACCTGCTGCACTGCCTCTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAACTTGGAAGATAGGTTCAAATAACCTGCTGCACTGCCTCTGCC  600

seq1  CACCACACTTGAGACTTCACAGCCTGCGTCTGTTCATCCTCAGCTTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACTTGAGACTTCACAGCCTGCGTCTGTTCATCCTCAGCTTTGGT  650

seq1  CACTAGCAGCCCAGAAGCCTATCCTCTGCTCTGTTGTTCCAGACTAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCAGCCCAGAAGCCTATCCTCTGCTCTGTTGTTCCAGACTAGGAT  700

seq1  CTTTATCTCTTCACTTGATGTCCTTGATGTCTATTTTCTCAAGGGGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCTCTTCACTTGATGTCCTTGATGTCTATTTTCTCAAGGGGCCTG  750

seq1  GGCCTCTGTCTCGTCTTCCTTCTGGCGTAGAGCTTCCAAGATTGGCAGTG  800
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGCCTCTGTCTCGTCTTCCTTCTGGCGTAGAGCTTTCAAGATTGGCAGTG  800

seq1  CCATTGCAGTTGCTCTTGAGGACATTTCCGGCTGCCTACTGAGCTCCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCAGTTGCTCTTGAGGACATTTCCGGCTGCCTACTGAGCTCCTTC  850

seq1  CTGACATTGATTACCTCATATATTTGAACCAGGGGGTGGCACTACTTGAG  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGACATTGATTACCTCATATATTTGAACCA-GGGGTGGCACTACTTGAG  899

seq1  AAGGATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCCTTGTTGG-AG  949
      || || |||  | ||||||||||||| ||   ||||||||||||||| ||
seq2  AAAGA-TAGAGGTTGTGGCCTTGTTGAAG--AGTGTGGCCTTGTTGGAAG  946

seq1  GAGGTG-TGGCCTTGTTGGAGGAG  972
      |||||| |||||||||||||||||
seq2  GAGGTGTTGGCCTTGTTGGAGGAG  970

seq1: chr13_100060765_100061118
seq2: B6Ng01-160N18.g_69_422 (reverse)

seq1  CACTCTCCATCACCACCACCCCGCCCCAGAGAGCCCCCTAGCCGCCACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCCATCACCACCACCCCGCCCCAGAGAGCCCCCTAGCCGCCACTC  50

seq1  CCTACATCACATGGTGCCCAGGGTCCTCCAAGCTGGTAGGCAGTAGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATCACATGGTGCCCAGGGTCCTCCAAGCTGGTAGGCAGTAGCAAA  100

seq1  TTAATTTTTTTCACTGGGTCATTGATTTCTTCTCCAGGCTTCTGAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTTTCACTGGGTCATTGATTTCTTCTCCAGGCTTCTGAAAGCA  150

seq1  GATGCCAACACATGGTAACTGCACCTGCGGGCACTCTGGCACACAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAACACATGGTAACTGCACCTGCGGGCACTCTGGCACACAATTTT  200

seq1  TCTGAATCTGTGTGGTAAGTCTGGGTTCTTGATGTGTAGCGGTACATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATCTGTGTGGTAAGTCTGGGTTCTTGATGTGTAGCGGTACATTGG  250

seq1  GAAGCAGAGCTCTGCTCCTGTTCCCTGTCTGGCCGACCGTAGAGTGGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGAGCTCTGCTCCTGTTCCCTGTCTGGCCGACCGTAGAGTGGAAC  300

seq1  TACTGCTTCACCTAAAGGGGAAGGAGCAAGAGTCGGAGCTCAGGTGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTTCACCTAAAGGGGAAGGAGCAAGAGTCGGAGCTCAGGTGTCCT  350

seq1  GGGA  354
      ||||
seq2  GGGA  354