BAC Information

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BAC

Clone NameB6Ng01-161L07
Chromosome13 (Build37)
Map Location 5,528,706 - 5,529,860
singlet/doubletsinglet
Overlap genenone
Upstream geneAkr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161L07.bB6Ng01-161L07.g
ACCDH954745DH954746
length3851,131
definitionDH954745|Mus musculus domesticus DNA, BAC clone: B6Ng01-161L07, 5' end.DH954746|Mus musculus domesticus DNA, BAC clone: B6Ng01-161L07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aacctctaatatccatataaacaaaaacaaaacaaaacaaaacaaaacaa
aaaaaccctgagtacctataatcttactgtggggaaagtgaagagacatt
gggatctatggatttgctgtttagctactctagatgaattagtacttaag
ttcagtcagagactctttcttaaaaactaagcaggggaagagattgagga
agacatcagacctcaatctctggccattatatgtgaagaacacatgtgag
acagttgactctccagttgggttcttggcttgccctcttttcaagaatag
agtgaagacaggaggaaaaggaaagaaaagaaaagaaaagaaaagaagag
gagaggagaggagaggagaggagaggagaggagag

gaattcagaggttagaattgtaatttcctctaaaggaaacactcctgttt
tgaatctttagtagctgcgtctagattattaacaaccctacttatatttg
atggacaagtaataatgtggccatctatctacaagacagcagagctgaat
acatttctaagtttataaatgatttttaaaagccctacagacaaatttta
ttaaagaaaagaagaaaaatctggtaaatggagtctttggattgtactga
tgaacaaatcttgactttctacaattgctaataaggatcttcagggtaaa
ataaataaacattttaggaacataacatagtgtcttctatagcagtgtca
accttagaaaactgtacaagaggttcaacagtaaaaaagaaaaaaaaaag
tggaactagggacctgattcagtggtaaagtgcttgccttgtaaatgtgt
ggacctgcgttctggccatcgaaaagggcactttctaacaaagcattgat
atatatatggagagatatttcaaatgaagcatagaaactgttccaagaaa
accatttatttattcactcattcatcatacatgccatatcatgtgctcag
tgtctgagactttgggaaattgagacagaatgaagaaaatggcatatctt
tttatccatgaacaaagtttaatgaaatccacaacatagaaacatcagtt
cagtaatttgtttaactgatcaaagggctcacagatcgacaaaaatgacc
cccatatagaatacattttataaatcatcatttaatcaatataccatgac
tacctaccatggaccaaatttggtgccatccaagagctgatgtctaacca
ctaaaagacatagatgctcactgactatctaatagagagactaaatagta
cacagaagtaaagaaagaccaagggacatagagggaaactagaagtgata
gatgagcctatgaatgatagtgaaagagaagaatttgggttattgttcaa
ctatgtaaatgtactctagttcttcagatgctgggtagcagaagaaatct
gattatatggccacggcgaaataaattcatgtttattgattttcacatag
cttacgtgagttgaactgtatctttaagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5528706_5529860
seq2: B6Ng01-161L07.g_69_1199

seq1  GAATTCAGAGGTTAGAATTGTAATTTCCTCTAAAGGAAACACTCCTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGTTAGAATTGTAATTTCCTCTAAAGGAAACACTCCTGTTT  50

seq1  TGAATCTTTAGTAGCTGCGTCTAGATTATTAACAACCCTACTTATATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTTAGTAGCTGCGTCTAGATTATTAACAACCCTACTTATATTTG  100

seq1  ATGGACAAGTAATAATGTGGCCATCTATCTACAAGACAGCAGAGCTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAAGTAATAATGTGGCCATCTATCTACAAGACAGCAGAGCTGAAT  150

seq1  ACATTTCTAAGTTTATAAATGATTTTTAAAAGCCCTACAGACAAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTAAGTTTATAAATGATTTTTAAAAGCCCTACAGACAAATTTTA  200

seq1  TTAAAGAAAAGAAGAAAAATCTGGTAAATGGAGTCTTTGGATTGTACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAAAGAAGAAAAATCTGGTAAATGGAGTCTTTGGATTGTACTGA  250

seq1  TGAACAAATCTTGACTTTCTACAATTGCTAATAAGGATCTTCAGGGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAATCTTGACTTTCTACAATTGCTAATAAGGATCTTCAGGGTAAA  300

seq1  ATAAATAAACATTTTAGGAACATAACATAGTGTCTTCTATAGCAGTGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAACATTTTAGGAACATAACATAGTGTCTTCTATAGCAGTGTCA  350

seq1  ACCTTAGAAAACTGTACAAGAGGTTCAACAGTAAAAAAGAAAAAAAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGAAAACTGTACAAGAGGTTCAACAGTAAAAAAGAAAAAAAAAAG  400

seq1  TGGAACTAGGGACCTGATTCAGTGGTAAAGTGCTTGCCTTGTAAATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTAGGGACCTGATTCAGTGGTAAAGTGCTTGCCTTGTAAATGTGT  450

seq1  GGACCTGCGTTCTGGCCATCGAAAAGGGCACTTTCTAACAAAGCATTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGCGTTCTGGCCATCGAAAAGGGCACTTTCTAACAAAGCATTGAT  500

seq1  ATATATATGGAGAGATATTTCAAATGAAGCATAGAAACTGTTCCAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGGAGAGATATTTCAAATGAAGCATAGAAACTGTTCCAAGAAA  550

seq1  ACCATTTATTTATTCACTCATTCATCATACATGCCATATCATGTGCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTATTTATTCACTCATTCATCATACATGCCATATCATGTGCTCAG  600

seq1  TGTCTGAGACTTTGGGAAATTGAGACAGAATGAAGAAAATGGCATATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGACTTTGGGAAATTGAGACAGAATGAAGAAAATGGCATATCTT  650

seq1  TTTATCCATGAACAAAGTTTAATGAAATCCACAACATAGAAACATCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCATGAACAAAGTTTAATGAAATCCACAACATAGAAACATCAGTT  700

seq1  CAGTAATTTGTTTAACTGATCAAAGGGCTCACAGATCGACAAAAATGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATTTGTTTAACTGATCAAAGGGCTCACAGATCGACAAAAATGACC  750

seq1  CCCATATAGAATACATTTTATAAATCATCATTTAATCAATATACCATGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATAGAATACATTTTATAAATCATCATTTAATCAATATACCATGAC  800

seq1  TACCTACCATGGACCAAATTTGGTGCCATCCCAAGAGCTGATGTCTAACC  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TACCTACCATGGACCAAATTTGGTGCCAT-CCAAGAGCTGATGTCTAACC  849

seq1  ACTAAAAGACATAGATGCTCACTGACTATCTAATAGAGAGACTAAATAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAGACATAGATGCTCACTGACTATCTAATAGAGAGACTAAATAGT  899

seq1  ACACAGAAGTAAAAGAAAGACCAAGGGACAATAGAGGGAAACTAAGAAGT  950
      |||||||||| |||||||||||||||||| ||||||||||||| ||||||
seq2  ACACAGAAGT-AAAGAAAGACCAAGGGAC-ATAGAGGGAAACT-AGAAGT  946

seq1  GATAGATTGAGCCTATGAAATGATAGGTGAAAGAGGAAAGAATTTGGGTA  1000
      |||||| |||||||||| ||||||| |||||||||  |||||||||||| 
seq2  GATAGA-TGAGCCTATG-AATGATA-GTGAAAGAG--AAGAATTTGGGTT  991

seq1  ATGGTCCAAACTATGTAAAATGTTACTCTAAGTCCTCCAGAGGCTGGGTA  1050
      || || | |||||||| ||||| |||||| ||| || |||| ||||||||
seq2  ATTGTTC-AACTATGT-AAATG-TACTCT-AGTTCTTCAGATGCTGGGTA  1037

seq1  GCAGATAGGAAATCTGAATTATATGGCCCACGGCAGATATAAAAATCATG  1100
      ||||  | |||||||| ||||||||| ||||||| || || ||| |||||
seq2  GCAG--AAGAAATCTG-ATTATATGG-CCACGGC-GAAAT-AAATTCATG  1081

seq1  TTATCTGATATTTCCACCAATAGCTACCTTTGAATGTGAACTGTATC-TT  1149
      ||   ||  |||| |||  ||||||  |  ||| | ||||||||||| ||
seq2  TTTATTG--ATTTTCAC--ATAGCTTAC-GTGAGT-TGAACTGTATCTTT  1125

seq1  AAGATA  1155
      ||||||
seq2  AAGATA  1131


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