BAC Information

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BAC

Clone NameB6Ng01-161L08
Chromosome13 (Build37)
Map Location 118,279,804 - 118,380,952
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365, LOC382807
Downstream geneHcn1, LOC100041695, LOC674926, Mrps30, LOC668309
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161L08.bB6Ng01-161L08.g
ACCDH954747DH954748
length262852
definitionDH954747|Mus musculus domesticus DNA, BAC clone: B6Ng01-161L08, 5' end.DH954748|Mus musculus domesticus DNA, BAC clone: B6Ng01-161L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,279,804 - 118,280,065)(118,380,101 - 118,380,952)
sequence
gaattcttttattgatagaattttatcatttactattaaaattcacaaat
gattaatagtgtttgttttttaatattagatttaatattcatactctata
cttagcttcttataatttttagtaatttattatattagtttaaattctct
agagaaaattaacaaaagaataaatatatatttaggggtggggggtgggg
acatccacatggagacaagggggtagggaggaggtacggaatatggagca
gtaggaggggtg
gaattctgtgtttactgttccttcctgttagtcattgttaaacgacgctg
gacgactcacatatgcacttgctacatacgctgcactgaacaaagagaca
acatagtggcccgttggaaggacacttttctcaaagatggctggcaccat
gtttgtatatactcttcaggctttatacaattaataaatccataaattag
gttttaaaatattattgtcaggccccatagaacgctgacattggccgctc
accgaattccaaacgttctttcttactgttgtggtacacccttaaggtcg
aaattggtccagagttttccagtttttcagatgatagattttccctagga
aaaaccgcaaacagttcagtagatccatcgtgcccacagctaggagtatt
tgaaacacattatgaaatgagctccgtccttagtgtggtacttagaaaaa
cctgccagagggccagagagaacttccatttcttcctgcagcattttaga
ggtgatatatctaacaccgtgttgcccagagcagcatgttgcttccactg
atggagcaaacccttggcacggaaggccagggatacctaacccttttaat
cctccactgggagtgggaagaaacaggcaaggaagtcatcactagcagct
cctgagcacatcgatcattagccagaatctgtgctggaaactgcaaggtt
ccatagtgccaaactatggttggtgaagatgtgataatgatatgtaaaac
cttagatctaaatttgtacttggacacaagttaactggagaagatataga
tagatagatagatagatagatagatagatagatagatggatagatagata
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118279804_118280065
seq2: B6Ng01-161L08.b_46_307

seq1  GAATTCTTTTATTGATAGAATTTTATCATTTACTATTAAAATTCACAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATTGATAGAATTTTATCATTTACTATTAAAATTCACAAAT  50

seq1  GATTAATAGTGTTTGTTTTTTAATATTAGATTTAATATTCATACTCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATAGTGTTTGTTTTTTAATATTAGATTTAATATTCATACTCTATA  100

seq1  CTTAGCTTCTTATAATTTTTAGTAATTTATTATATTAGTTTAAATTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTTCTTATAATTTTTAGTAATTTATTATATTAGTTTAAATTCTCT  150

seq1  AGAGAAAATTAACAAAAGAATAAATATATATTTAGGGGTGGGGGGTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAATTAACAAAAGAATAAATATATATTTAGGGGTGGGGGGTGGGG  200

seq1  ACATCCACATGGAGACAAGGGGGTAGGGAGGAGGTACGGAATATGGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCACATGGAGACAAGGGGGTAGGGAGGAGGTACGGAATATGGAGCA  250

seq1  GTAGGAGGGGTG  262
      ||||||||||||
seq2  GTAGGAGGGGTG  262

seq1: chr13_118380101_118380952
seq2: B6Ng01-161L08.g_67_918 (reverse)

seq1  TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC  50
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCCATCTATCTATCTATCTATCTATCTATCTATCTATC  50

seq1  TATCTATATCTTCTCCAGTTAACTTGTGTCCAAGTACAAATTTAGATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATATCTTCTCCAGTTAACTTGTGTCCAAGTACAAATTTAGATCTA  100

seq1  AGGTTTTACATATCATTATCACATCTTCACCAACCATAGTTTGGCACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTACATATCATTATCACATCTTCACCAACCATAGTTTGGCACTAT  150

seq1  GGCACCTTGCAGTTTCCAGCACAGATTCTGGCTAATGATCGATGTGCTCA  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCTTGCAGTTTCCAGCACAGATTCTGGCTAATGATCGATGTGCTCA  200

seq1  GGAGCTGCTAGTGATGACTTCCTTGCCTGTTTCTTCCCACTCCCAGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGCTAGTGATGACTTCCTTGCCTGTTTCTTCCCACTCCCAGTGGA  250

seq1  GGATTAAAAGGGTTAGGTATCCCTGGCCTTCCGTGCCAAGGGTTTGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAAGGGTTAGGTATCCCTGGCCTTCCGTGCCAAGGGTTTGCTCC  300

seq1  ATCAGTGGAAGCAACATGCTGCTCTGGGCAACACGGTGTTAGATATATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGGAAGCAACATGCTGCTCTGGGCAACACGGTGTTAGATATATCA  350

seq1  CCTCTAAAATGCTGCAGGAAGAAATGGAAGTTCTCTCTGGCCCTCTGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAAATGCTGCAGGAAGAAATGGAAGTTCTCTCTGGCCCTCTGGCA  400

seq1  GGTTTTTCTAAGTACCACACTAAGGACGGAGCTCATTTCATAATGTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTCTAAGTACCACACTAAGGACGGAGCTCATTTCATAATGTGTTT  450

seq1  CAAATACTCCTAGCTGTGGGCACGATGGATCTACTGAACTGTTTGCGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTCCTAGCTGTGGGCACGATGGATCTACTGAACTGTTTGCGGTT  500

seq1  TTTCCTAGGGAAAATCTATCATCTGAAAAACTGGAAAACTCTGGACCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGGGAAAATCTATCATCTGAAAAACTGGAAAACTCTGGACCAAT  550

seq1  TTCGACCTTAAGGGTGTACCACAACAGTAAGAAAGAACGTTTGGAATTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGACCTTAAGGGTGTACCACAACAGTAAGAAAGAACGTTTGGAATTCG  600

seq1  GTGAGCGGCCAATGTCAGCGTTCTATGGGGCCTGACAATAATATTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCGGCCAATGTCAGCGTTCTATGGGGCCTGACAATAATATTTTAAA  650

seq1  ACCTAATTTATGGATTTATTAATTGTATAAAGCCTGAAGAGTATATACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTTATGGATTTATTAATTGTATAAAGCCTGAAGAGTATATACAA  700

seq1  ACATGGTGCCAGCCATCTTTGAGAAAAGTGTCCTTCCAACGGGCCACTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGCCAGCCATCTTTGAGAAAAGTGTCCTTCCAACGGGCCACTAT  750

seq1  GTTGTCTCTTTGTTCAGTGCAGCGTATGTAGCAAGTGCATATGTGAGTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTCTTTGTTCAGTGCAGCGTATGTAGCAAGTGCATATGTGAGTCG  800

seq1  TCCAGCGTCGTTTAACAATGACTAACAGGAAGGAACAGTAAACACAGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCGTCGTTTAACAATGACTAACAGGAAGGAACAGTAAACACAGAAT  850

seq1  TC  852
      ||
seq2  TC  852