BAC Information

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BAC

Clone NameB6Ng01-164G06
Chromosome13 (Build37)
Map Location 11,484,480 - 11,485,647
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039648
Downstream geneZp4, Ryr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164G06.bB6Ng01-164G06.g
ACCDH956728DH956729
length1,1431,152
definitionDH956728|Mus musculus domesticus DNA, BAC clone: B6Ng01-164G06, 5' end.DH956729|Mus musculus domesticus DNA, BAC clone: B6Ng01-164G06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaccagaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgttaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caagacacccatggaaggagttacagagccaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaactctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaagtagccaagagctaaaggatctgcaccctatag
gtgacacattatgactgacagtacccggagctcttgactctagctgcata
tgttcaaagatgctagtcgcatcactggaagagaagccatgacgcaactt
atatgccagtacaggacgccaggctaaaggggatgtgtggtaa
gaattctctatcagacaatgtagcaatgaatgctatagtgagtgtagaat
ggaggatgtttgctgcatgcccatgtgaacaacagggtgtgagaatggaa
caggatgatggtaacattggtaacatatgtaaaagaaaggaagaaagaag
gaaagaaagagagagagagaaaagaatctcaggattttaatcttaacagt
aaaatttgacattacttgggaaaaatcatcatagcaaaaagggcatataa
aataaattaactatctgggcttgagggcacagttttgtattcccagctgt
tctggaggatatggtggtaagattctagtttgaaagtcagcttgggcaac
ttagtgaaaccatgtcttaaacaaacaaacaaacaaacaaacattaaaag
aagcctgggaattagcacagagtagagtgtttgagctgtgcaaggcctga
gggttagtattcagcacaattaagtaaatattgaaattaaacagaattat
tttgggaaagaagaggtgactcagtggttaagaatgctctttgcttttgc
agagaaccctgacttggttcccagcacatatatcaggccactcaaatcca
cctgtaactgtatctccagttgatcagatatctgcttctggccaccggtg
cccacacaaacaacagatgttgtttttatttgctgcatagaagctggtag
aaatagatttctatgtggccagtttggtaaaatgccccccgcccatacac
acaattatttcatggtatgttctcacctgcagttttaatttacatgaact
aaaagctttccataaaaacagttggtggttgaatcaacatttcaatacca
aaacattattaaatgatgcataaaatttatgatgaattctttcatatcat
ccagtagcagtcagcacacagcacaaggaagaaacgttatatttttttcc
cttccctgtaaagacttcacatgtactcttcatatgatttaaaacaaaca
gcagttacatttatttttcacccacagaggagcgcttgattgtgggtctt
tatgagccttgtagtccttgttgcttaattgagaatcagcagatcatagt
ccggtcgaatgcagaatcttgtcttgtcactcagctgtcagtaattggaa
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_11484480_11485647
seq2: B6Ng01-164G06.g_67_1218 (reverse)

seq1  GCTTCCAATTACTGACAGCTGAGTGACAAGACAAGATTCTGCATCTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||  ||| 
seq2  GCTTCCAATTACTGACAGCTGAGTGACAAGACAAGATTCTGCATTCGACC  50

seq1  CGACTATTGTATCCTGCTGATTCTCAAATTAAAGCCAAACAAAGGAACTT  100
       ||||||  |   ||||||||||||||  | ||||  |||||  | ||| 
seq2  GGACTATGAT---CTGCTGATTCTCAA--TTAAGC--AACAA--GGACT-  90

seq1  AACAA-GCTCATAAAGACCCACAATCAAAGGCGCTCCTCTGTGGGTTGAA  149
       |||| ||||||||||||||||||||||  ||||||||||||||| ||||
seq2  -ACAAGGCTCATAAAGACCCACAATCAA--GCGCTCCTCTGTGGG-TGAA  136

seq1  AAATAAATTGTAACTGCTGTTTGTTTTAAATTCATATTGAAGAGTACATG  199
      ||||||| |||||||||||||||||||||| ||||| |||||||||||||
seq2  AAATAAA-TGTAACTGCTGTTTGTTTTAAA-TCATA-TGAAGAGTACATG  183

seq1  TGAAGTCTTTCCAGGGAAGGGAAAAAAATATAACGTTTCTTCCTTGTGCT  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCTTTACAGGGAAGGGAAAAAAATATAACGTTTCTTCCTTGTGCT  233

seq1  GTGTTGCTGACTGCTACTGGATGATATGAAAGAATTCATCATAAATTTTA  299
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTG-TGCTGACTGCTACTGGATGATATGAAAGAATTCATCATAAATTTTA  282

seq1  TGCATCATTTAATAATGTTTTGGTATTGAAATGTTGATTCAACCACCAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCATTTAATAATGTTTTGGTATTGAAATGTTGATTCAACCACCAAC  332

seq1  TGTTTTTATGGAAAGCTTTTAGTTCATGTAAATTAAAACTGCAGGTGAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATGGAAAGCTTTTAGTTCATGTAAATTAAAACTGCAGGTGAGA  382

seq1  ACATACCATG-AATAATTGTGTGTATGGGCGGGGGGCATTTTACCAAACT  448
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACATACCATGAAATAATTGTGTGTATGGGCGGGGGGCATTTTACCAAACT  432

seq1  GGCCACATAGAAATCTATTTCTACCAGCTTCTATGCAGCAAATAAAAACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACATAGAAATCTATTTCTACCAGCTTCTATGCAGCAAATAAAAACA  482

seq1  ACATCTGTTGTTTGTGTGGGCACCGGTGGCCAGAAGCAGATATCTGATCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTTGTTTGTGTGGGCACCGGTGGCCAGAAGCAGATATCTGATCA  532

seq1  ACTGGAGATACAGTTACAGGTGGATTTGAGTGGCCTGATATATGTGCTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGATACAGTTACAGGTGGATTTGAGTGGCCTGATATATGTGCTGG  582

seq1  GAACCAAGTCAGGGTTCTCTGCAAAAGCAAAGAGCATTCTTAACCACTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAGTCAGGGTTCTCTGCAAAAGCAAAGAGCATTCTTAACCACTGA  632

seq1  GTCACCTCTTCTTTCCCAAAATAATTCTGTTTAATTTCAATATTTACTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTCTTCTTTCCCAAAATAATTCTGTTTAATTTCAATATTTACTTA  682

seq1  ATTGTGCTGAATACTAACCCTCAGGCCTTGCACAGCTCAAACACTCTACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCTGAATACTAACCCTCAGGCCTTGCACAGCTCAAACACTCTACT  732

seq1  CTGTGCTAATTCCCAGGCTTCTTTTAATGTTTGTTTGTTTGTTTGTTTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTAATTCCCAGGCTTCTTTTAATGTTTGTTTGTTTGTTTGTTTGT  782

seq1  TTAAGACATGGTTTCACTAAGTTGCCCAAGCTGACTTTCAAACTAGAATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACATGGTTTCACTAAGTTGCCCAAGCTGACTTTCAAACTAGAATC  832

seq1  TTACCACCATATCCTCCAGAACAGCTGGGAATACAAAACTGTGCCCTCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACCATATCCTCCAGAACAGCTGGGAATACAAAACTGTGCCCTCAA  882

seq1  GCCCAGATAGTTAATTTATTTTATATGCCCTTTTTGCTATGATGATTTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGATAGTTAATTTATTTTATATGCCCTTTTTGCTATGATGATTTTT  932

seq1  CCCAAGTAATGTCAAATTTTACTGTTAAGATTAAAATCCTGAGATTCTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTAATGTCAAATTTTACTGTTAAGATTAAAATCCTGAGATTCTTT  982

seq1  TCTCTCTCTCTCTTTCTTTCCTTCTTTCTTCCTTTCTTTTACATATGTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTTTCTTTCCTTCTTTCTTCCTTTCTTTTACATATGTTA  1032

seq1  CCAATGTTACCATCATCCTGTTCCATTCTCACACCCTGTTGTTCACATGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTACCATCATCCTGTTCCATTCTCACACCCTGTTGTTCACATGG  1082

seq1  GCATGCAGCAAACATCCTCCATTCTACACTCACTATAGCATTCATTGCTA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAGCAAACATCCTCCATTCTACACTCACTATAGCATTCATTGCTA  1132

seq1  CATTGTCTGATAGAGAATTC  1168
      ||||||||||||||||||||
seq2  CATTGTCTGATAGAGAATTC  1152