BAC Information

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BAC

Clone NameB6Ng01-164M24
Chromosome13 (Build37)
Map Location 44,357,547 - 44,482,083
singlet/doubletdoublet
Overlap geneEG637868
Upstream geneGfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432, A730030A06
Downstream geneEG667157, Jarid2, Dtnbp1, Hsp25-ps1, LOC100039502, LOC667204, LOC100039533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164M24.bB6Ng01-164M24.g
ACCDH957039DH957040
length9331,112
definitionDH957039|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M24, 5' end.DH957040|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,357,547 - 44,358,301)(44,480,976 - 44,482,083)
sequence
gaattctcttagaaaatatgaatcagagatgctcatgataatgacggtcg
agtggttaccaggagcccttgcaaagcactttaacctgttaactcttaat
cctcacagcaaatctgctatggagtgatattaacatcgcaaatctactaa
tgaattaacaagagaatggaaagataagtagccagccactgccttccggc
tcaggtagtcctggcaaagctccagattcataaacactgagctaaacttc
cgtctcccttcctctacctcaacccagcagactcttgcagtcttccactg
ttaaataaccagcaaccccatcccacactccatccaggcaaaacaccttt
gctgtcccctcctcccccccccccccacacacatacacatccaagtcatc
gcaagtcatgtcatctttccttccaaaaaggtaaagaagccacagcctct
cactacctgaagtgtgtccactccatacctacactacggaccatctggat
gattacaggaaccttctcgttggtcctcctgccccaagctttctgctcca
ccctcacatgcacagcttcacttcgctatagtagaaaggagactcagttg
atgaacacacatcatctctgtactcataacttttcagtggcctcccatct
tgttgcggctgaaatccaaagtctttgacctataatgttctccaagaagc
ccttcactctctacccgtccagcaatcctaccagcttcatttgcatggta
ctcatttgcatggctctaaccccacctcagccccctcatctccctggagc
acacaggtccctccctcagatatccctggcctgccctttctttcacatgc
tagcactggtcctcatttcccttctttaactctgaaccttcctcttctga
ccaggtaaagtagcaaccttccggccatggtgc
gaattcctttctgtttgccaatcctgtaaaagcttattagaatctagaat
acattatttcaacaaagatttaaggactatctctcaactaaatgcatgat
tacattcttataatatctcagatggttcattcagtttatttgactatggc
attgagaatatagatcacgaatttaaatttcttttatgttttctaatgca
actccacctcaagcctttcccaagttaacagaggagctcttttaaggtaa
cattgtcttcatgtagctagagaaaaacttggtaaagatagtgatagaaa
tagtggaatttctctttaggaggagaaaatcctcaaaaacttgattttat
gtggtggatcagtagaatttctttccttccttcttttctttctttctttc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tttatttattttatgagtacgctgtagctgtcttcagacacaccagaaga
aggcatcagatcccattacagatagttgtgagtcaccatgtagttgctgg
gatttgaactcaggacctctggaaaagcagtcagtgctcttaatccctga
gccatctctccagcctgagaatttccattttcttttcttttttttttttt
tttcaagatttatttatttatttatttattatatgtaagtacattgtagc
tgtcttcagacactccagaagagggagtcagatctccttacggatggttg
tgagccaccatgtggttgctgggatttgaactctggaccttcggaagagc
agtcggggtgctctaacccactgagccacctcaccagcccgagaatttcc
attttcaatagtagcttatcatttgattaaattggaatacaagaaagaag
agggttaaatataatcctaggatttacacttacagtatcaaagatatttg
atcatatgacaaaaccttagagagcaatgttagcctgtcttcagcaagaa
agctaactgatgtgcttgtttcaggttggaaactgaataggtaagatctg
ggaggtttcagaatgaatctgaaaactaaagccaaagtctgcagacatag
gctatggagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44357547_44358301
seq2: B6Ng01-164M24.b_46_800

seq1  GAATTCTCTTAGAAAATATGAATCAGAGATGCTCATGATAATGACGGTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGAAAATATGAATCAGAGATGCTCATGATAATGACGGTCG  50

seq1  AGTGGTTACCAGGAGCCCTTGCAAAGCACTTTAACCTGTTAACTCTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTACCAGGAGCCCTTGCAAAGCACTTTAACCTGTTAACTCTTAAT  100

seq1  CCTCACAGCAAATCTGCTATGGAGTGATATTAACATCGCAAATCTACTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGCAAATCTGCTATGGAGTGATATTAACATCGCAAATCTACTAA  150

seq1  TGAATTAACAAGAGAATGGAAAGATAAGTAGCCAGCCACTGCCTTCCGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAACAAGAGAATGGAAAGATAAGTAGCCAGCCACTGCCTTCCGGC  200

seq1  TCAGGTAGTCCTGGCAAAGCTCCAGATTCATAAACACTGAGCTAAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAGTCCTGGCAAAGCTCCAGATTCATAAACACTGAGCTAAACTTC  250

seq1  CGTCTCCCTTCCTCTACCTCAACCCAGCAGACTCTTGCAGTCTTCCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCCTTCCTCTACCTCAACCCAGCAGACTCTTGCAGTCTTCCACTG  300

seq1  TTAAATAACCAGCAACCCCATCCCACACTCCATCCAGGCAAAACACCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAACCAGCAACCCCATCCCACACTCCATCCAGGCAAAACACCTTT  350

seq1  GCTGTCCCCTCCTCCCCCCCCCCCCCACACACATACACATCCAAGTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCCCTCCTCCCCCCCCCCCCCACACACATACACATCCAAGTCATC  400

seq1  GCAAGTCATGTCATCTTTCCTTCCAAAAAGGTAAAGAAGCCACAGCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCATGTCATCTTTCCTTCCAAAAAGGTAAAGAAGCCACAGCCTCT  450

seq1  CACTACCTGAAGTGTGTCCACTCCATACCTACACTACGGACCATCTGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACCTGAAGTGTGTCCACTCCATACCTACACTACGGACCATCTGGAT  500

seq1  GATTACAGGAACCTTCTCGTTGGTCCTCCTGCCCCAAGCTTTCTGCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAGGAACCTTCTCGTTGGTCCTCCTGCCCCAAGCTTTCTGCTCCA  550

seq1  CCCTCACATGCACAGCTTCACTTCGCTATAGTAGAAAGGAGACTCAGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACATGCACAGCTTCACTTCGCTATAGTAGAAAGGAGACTCAGTTG  600

seq1  ATGAACACACATCATCTCTGTACTCATAACTTTTCAGTGGCCTCCCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACACACATCATCTCTGTACTCATAACTTTTCAGTGGCCTCCCATCT  650

seq1  TGTTGCGGCTGAAATCCAAAGTCTTTGACCTATAATGTTCTCCAAGAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCGGCTGAAATCCAAAGTCTTTGACCTATAATGTTCTCCAAGAAGC  700

seq1  CCTTCACTCTCTACCCGTCCAGCAATCCTACCAGCTTCATTTGCATGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTCTCTACCCGTCCAGCAATCCTACCAGCTTCATTTGCATGGTA  750

seq1  CTCAT  755
      |||||
seq2  CTCAT  755

seq1: chr13_44480976_44482083
seq2: B6Ng01-164M24.g_67_1178 (reverse)

seq1  CTTCT-CATAGCCTATGTCTGCAGACTTTGGCCTTAGTTTTCAGATTCA-  48
      ||||| |||||||||||||||||||||||||| |||||||||||||||| 
seq2  CTTCTCCATAGCCTATGTCTGCAGACTTTGGCTTTAGTTTTCAGATTCAT  50

seq1  TCTGAAA-CTCCCAGATCTTTAACTA-TCAGTTT-CAAACTGAAACAAGC  95
      ||||||| |||||||||| ||| ||| ||||||| ||| |||||||||||
seq2  TCTGAAACCTCCCAGATC-TTACCTATTCAGTTTCCAACCTGAAACAAGC  99

seq1  ACATCAGTTAGCTCTC-TGCTG-AGACAGGCT-ACATTGCTCTCTAAAGT  142
      ||||||||||||| || ||||| ||||||||| |||||||||||||| ||
seq2  ACATCAGTTAGCTTTCTTGCTGAAGACAGGCTAACATTGCTCTCTAAGGT  149

seq1  TTTGTCATATGATCAAATATCTTTGATACTGTAAGTGTAAATCCTAGGAT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCATATGATCAAATATCTTTGATACTGTAAGTGTAAATCCTAGGAT  199

seq1  TATATTTAACCCTCTTCTTTCCTGTATTCCAATTTAATCAAATGATAAGC  242
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATATTTAACCCTCTTCTTTCTTGTATTCCAATTTAATCAAATGATAAGC  249

seq1  TACTATTGAAAATGGAAATTCTCGGGCTGGTGAGGTGGCTCAGTGGGTTA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTGAAAATGGAAATTCTCGGGCTGGTGAGGTGGCTCAGTGGGTTA  299

seq1  GAGCA-CCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC  341
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC  349

seq1  ACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACTCCCTCTTCTGGA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGGCTCACAACCATCCGTAAGGAGATCTGACTCCCTCTTCTGGA  399

seq1  GTGTCTGAAGACAGCTACAATGTACTTACATATAATAAATAAATAAATAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGAAGACAGCTACAATGTACTTACATATAATAAATAAATAAATAA  449

seq1  ATAAATCTTGAAAAAAAAAAAAAAAAGAAAAGAAAATGGAAATTCTCAGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTTGAAAAAAAAAAAAAAAAGAAAAGAAAATGGAAATTCTCAGG  499

seq1  CTGGAGAGATGGCTCAGGGATTAAGAGCACTGACTGCTTTTCCAGAGGTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAGATGGCTCAGGGATTAAGAGCACTGACTGCTTTTCCAGAGGTC  549

seq1  CTGAGTTCAAATCCCAGCAACTACATGGTGACTCACAACTATCTGTAATG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCAAATCCCAGCAACTACATGGTGACTCACAACTATCTGTAATG  599

seq1  GGATCTGATGCCTTCTTCTGGTGTGTCTGAAGACAGCTACAGCGTACTCA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGATGCCTTCTTCTGGTGTGTCTGAAGACAGCTACAGCGTACTCA  649

seq1  TAAAATAAATAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  691
      ||||||||||||    ||||||||||||||||||||||||||||||||||
seq2  TAAAATAAATAA----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  695

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAGGAAGGAAAGAAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAGGAAGGAAAGAAA  745

seq1  TTCTACTGATCCACCACATAAAATCAAGTTTTTGAGGATTTTCTCCTCCT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGATCCACCACATAAAATCAAGTTTTTGAGGATTTTCTCCTCCT  795

seq1  AAAGAGAAATTCCACTATTTCTATCACTATCTTTACCAAGTTTTTCTCTA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAATTCCACTATTTCTATCACTATCTTTACCAAGTTTTTCTCTA  845

seq1  GCTACATGAAGACAATGTTACCTTAAAAGAGCTCCTCTGTTAACTTGGGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATGAAGACAATGTTACCTTAAAAGAGCTCCTCTGTTAACTTGGGA  895

seq1  AAGGCTTGAGGTGGAGTTGCATTAGAAAACATAAAAGAAATTTAAATTCG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTGAGGTGGAGTTGCATTAGAAAACATAAAAGAAATTTAAATTCG  945

seq1  TGATCTATATTCTCAATGCCATAGTCAAATAAACTGAATGAACCATCTGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTATATTCTCAATGCCATAGTCAAATAAACTGAATGAACCATCTGA  995

seq1  GATATTATAAGAATGTAATCATGCATTTAGTTGAGAGATAGTCCTTAAAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTATAAGAATGTAATCATGCATTTAGTTGAGAGATAGTCCTTAAAT  1045

seq1  CTTTGTTGAAATAATGTATTCTAGATTCTAATAAGCTTTTACAGGATTGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTGAAATAATGTATTCTAGATTCTAATAAGCTTTTACAGGATTGG  1095

seq1  CAAACAGAAAGGAATTC  1108
      |||||||||||||||||
seq2  CAAACAGAAAGGAATTC  1112