BAC Information

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BAC

Clone NameB6Ng01-164O04
Chromosome13 (Build37)
Map Location 77,365,767 - 77,366,751
singlet/doubletsinglet
Overlap genenone
Upstream geneGm276, Mctp1, LOC666603, EG666607, Ankrd32, 2210408I21Rik, LOC631139
Downstream geneLOC675063, D13Mgi7, 1110033M05Rik, 1700013G10Rik, Nr2f1, EG666856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164O04.bB6Ng01-164O04.g
ACCDH957095DH957096
length1,0261,193
definitionDH957095|Mus musculus domesticus DNA, BAC clone: B6Ng01-164O04, 5' end.DH957096|Mus musculus domesticus DNA, BAC clone: B6Ng01-164O04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattgctcatggttttggaaaataatatgtcctttcagccacta
cctgtgtttctatggtttcatctgatttagctggggtttgatatttttcc
aaaggctgcttgttgcaaatcaatgtgaggagccctaatatttctctagt
ttgattttcagtgtgctacattttgctagaagacagcgggattaaaattt
tgtctatcagagaataaataaaaatgctgttaaatatgtagtcttaatcc
acactccttatgactatgcatccatagatacatttatataaatatatacc
ttatataacacatgcatacacatacacacatttaattttaggtcaagaat
tccagaatactttgagtatgttttatttaattggttattttggtaaggaa
ttattaaaaattaaacatgttaaaatcatattgtagaataaatttttgga
ctccacttaatattgcattgatttttaaatactttgttttgtttttaatt
tattttttacattccatattccatttgccccccccccggcatccaccctc
taactactccacatcccacacctcttccgcacacccacaccacacctgac
ctctaaactacctggggcctccagtttcttcaggattagaagcatcttct
ctgaatgaacacagacccagaagtcctctactctatgtgtgttgggggcc
tcatatcagctggtgtatgatgtctgtttggtggtccagtgtttgagaga
tctcgggggtccagattaattgagactgctggtcctcctacagggtcacg
ctcctcctcaacttctttcagtctttccctaattcaacaacagggatcag
ctgcttttgtccatggttgggtgcaaatatctgcaaactgactctttcag
ctgcttgttgggtccttcggaggacagtcatgatagatctctgtttgtga
gcactccatagctcagtaatagtgtcaggccttgggacgtccccttgagc
tgaatccactttgggctgtcactgga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatatggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccatctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttgggagctgagatg
aaaggatggaccatctagagactgccttatccagggatccaccccataat
aagcatccaaatgctgacaccattgcatatactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgcccacagtcagctaatgggatggatcacagggctcc
catggaggagctagagaaagtacccaaagagctaaagggatctgcaaccc
tataggtgatcaacattatggaactaaacagtaccctggagctcttgact
ctagcctgcatatgtatccaaagatggcctagacggtccattcactggaa
ggagaggcccattggaccaccaacttttaattgccctggacagggaaacc
catggctaaaaaggggggaagtgtgcgatagagggaagtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_77365767_77366751
seq2: B6Ng01-164O04.b_46_1028

seq1  GAATTCTATTGCTCATGGTTTTGGAAAATAATATGTCCTTTCAGCCACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTGCTCATGGTTTTGGAAAATAATATGTCCTTTCAGCCACTA  50

seq1  CCTGTGTTTCTATGGTTTCATCTGATTTAGCTGGGGTTTGATATTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTTTCTATGGTTTCATCTGATTTAGCTGGGGTTTGATATTTTTCC  100

seq1  AAAGGCTGCTTGTTGCAAATCAATGTGAGGAGCCCTAATATTTCTCTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGCTTGTTGCAAATCAATGTGAGGAGCCCTAATATTTCTCTAGT  150

seq1  TTGATTTTCAGTGTGCTACATTTTGCTAGAAGACAGCGGGATTAAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTCAGTGTGCTACATTTTGCTAGAAGACAGCGGGATTAAAATTT  200

seq1  TGTCTATCAGAGAATAAATAAAAATGCTGTTAAATATGTAGTCTTAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATCAGAGAATAAATAAAAATGCTGTTAAATATGTAGTCTTAATCC  250

seq1  ACACTCCTTATGACTATGCATCCATAGATACATTTATATAAATATATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCTTATGACTATGCATCCATAGATACATTTATATAAATATATACC  300

seq1  TTATATAACACATGCATACACATACACACATTTAATTTTAGGTCAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAACACATGCATACACATACACACATTTAATTTTAGGTCAAGAAT  350

seq1  TCCAGAATACTTTGAGTATGTTTTATTTAATTGGTTATTTTGGTAAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAATACTTTGAGTATGTTTTATTTAATTGGTTATTTTGGTAAGGAA  400

seq1  TTATTAAAAATTAAACATGTTAAAATCATATTGTAGAATAAATTTTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAAAATTAAACATGTTAAAATCATATTGTAGAATAAATTTTTGGA  450

seq1  CTCCACTTAATATTGCATTGATTTTTAAATACTTTGTTTTGTTTTTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTAATATTGCATTGATTTTTAAATACTTTGTTTTGTTTTTAATT  500

seq1  TATTTTTTACATTCCATATTCCATTTGCCCCCCCCCCGGCATCCACCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTACATTCCATATTCCATTTGCCCCCCCCCCGGCATCCACCCTC  550

seq1  TAACTACTCCACATCCCACACCTCTTCCGCACACCCACACCACACCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTACTCCACATCCCACACCTCTTCCGCACACCCACACCACACCTGAC  600

seq1  CTCTAAACTACCTGGGGCCTCCAGTTTCTTCAGGATTAGAAGCATCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAACTACCTGGGGCCTCCAGTTTCTTCAGGATTAGAAGCATCTTCT  650

seq1  CTGAATGAACACAGACCCAGAAGTCCTCTACTCTATGTGTGTTGGGGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGAACACAGACCCAGAAGTCCTCTACTCTATGTGTGTTGGGGGCC  700

seq1  TCATATCAGCTGGTGTATGATGTCTGTTTGGTGGTCCAGTGTTTGAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCAGCTGGTGTATGATGTCTGTTTGGTGGTCCAGTGTTTGAGAGA  750

seq1  TCTCGGGGGTCCAGATTAATTGAGACTGCTGGTCCTCCTACAGGGTCACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGGGGTCCAGATTAATTGAGACTGCTGGTCCTCCTACAGGGTCACG  800

seq1  CTCCTCCTCAACTTCTTTCAGTCTTTCCCTAATTCAACAACAGGGATCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCAACTTCTTTCAGTCTTTCCCTAATTCAACAACAGGGATCAG  850

seq1  CTGCTTTTGTCCATTGGTTGGGTGCAAATATCTGCAAACTGACTCTTTCA  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTGTCCA-TGGTTGGGTGCAAATATCTGCAAACTGACTCTTTCA  899

seq1  GCTGCTTGTTGGGTCCTTCGGAGGACAGTCATGATAGATCTCTGTTTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTGTTGGGTCCTTCGGAGGACAGTCATGATAGATCTCTGTTTGTG  949

seq1  AGCACTCCATAGCCTCAGTAATAGTGTCAGGCCTT  985
      |||||||||||| ||||||||||||||||||||||
seq2  AGCACTCCATAG-CTCAGTAATAGTGTCAGGCCTT  983