BAC Information

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BAC

Clone NameB6Ng01-166G15
Chromosome13 (Build37)
Map Location 118,266,280 - 118,266,863
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365, LOC382807
Downstream geneHcn1, LOC100041695, LOC674926, Mrps30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166G15.b
ACCDH958205
length932
definitionDH958205|Mus musculus domesticus DNA, BAC clone: B6Ng01-166G15, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctattttgaggtcaacctgtgctacacaggaagtttgaggccgt
gatgagctactctttgagtccctgtattaataaaatatcaaatttaaacc
tatttcagctacttttatattgtaaatattgtgattttaaagtatacact
gctgtcctgtcaacgaacctgataacactgtaatgccatggaagccttta
caaacacactgttgtttcctttccggtcagggcaattaaagaggggcttt
tatcgcgacttcagtaactgggaaaatttcattcatttaaaatgtttcaa
agataaggcaaggggcgggtgaagaagaaagcatcatgggggttggggga
ggggtcatctcactgtctctgtgtgtgtctctctttctctttctctctgt
ttctctgtgtctctctttctagtttaagattttagatttagatggcctat
caattggcaagagtggagtattagtatgtgaaggagatctgggattattt
attcctgtttcttcctgtgtgtggttacccaggttaccctctttaggtta
gagttttatttttaccacctctgtgagactagatttatagattggtattg
ccttttttaaaaaagcatggaatatcttattttctccacctcttttaata
gaaagattgctggatataatattgcctgctagtgtctgtggtctcttaga
gtttgcagaatatctgtctaggcccttctggttctaagatcttcattgag
aagttagatgttattctaacaggactatgttttttgctatttgctctttt
tttcttgcattttaaaaatatcatttctttgttctttatatgtggtgttt
tatattatgtgccaaaagatctcttttgtgttccagtctggtgttctgca
tgcttttgaccttctctagtttggaaaatttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118266280_118266863
seq2: B6Ng01-166G15.b_400_976

seq1  CATCTCACTGTCTCTGTGTGTGTCTCTCTTTCTCTTTCTCTCTGTTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCACTGTCTCTGTGTGTGTCTCTCTTTCTCTTTCTCTCTGTTTCTC  50

seq1  TGTGTCTCTCTTTCTAGTTTAAGATTTTAGATTTAGATGGCCTATCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCTCTTTCTAGTTTAAGATTTTAGATTTAGATGGCCTATCAATT  100

seq1  GGCAAGAGTGGAGTATTAGTATGTGAAGGAGATCTGGGATTATTTATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAGTGGAGTATTAGTATGTGAAGGAGATCTGGGATTATTTATTCC  150

seq1  TGTTTCTTCCTGTGTGTGGTTACCCAGGTTACCCTCTTTAGGTTAGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTCCTGTGTGTGGTTACCCAGGTTACCCTCTTTAGGTTAGAGTT  200

seq1  TTATTTTTACCACCTCTGTGAGACTAGATTTATAGATTGGTATTGCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTACCACCTCTGTGAGACTAGATTTATAGATTGGTATTGCCTTT  250

seq1  TTTAAAAAAGCATGGAATATCTTATTTTCTCCACCTCTTTTAATAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAGCATGGAATATCTTATTTTCTCCACCTCTTTTAATAGAAAG  300

seq1  ATTGCTGGATATAATATTGCCTGCTAGTGTCTGTGGTCTCTTAGAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGGATATAATATTGCCTGCTAGTGTCTGTGGTCTCTTAGAGTTTG  350

seq1  CAGAATATCTGTCTAGGCCCTTCTGGTTCTAAGATCTTCATTGAGAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATCTGTCTAGGCCCTTCTGGTTCTAAGATCTTCATTGAGAAGTT  400

seq1  AGATGTTATTCTAACAGGACTATGTTTTTTGCTATTTGCTCTTTTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTATTCTAACAGGACTATGTTTTTTGCTATTTGCTCTTTTTTTCT  450

seq1  TGCATTTTAAAAATATCATTTCTTTGTTCTTTATATGTGGTGTTTTTATA  500
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  TGCATTTTAAAAATATCATTTCTTTGTTCTTTATATGTGGTG-TTTTAT-  498

seq1  ATTATGTGCCAAAAAGAATCTCTTTTGTGTCCCAGTCTGGTGTTCTGCAT  550
      ||||||||||||||   ||||||||||||| |||||||||||||||||||
seq2  ATTATGTGCCAAAA--GATCTCTTTTGTGTTCCAGTCTGGTGTTCTGCAT  546

seq1  GCTTTGTGTACCTTCTTTAGTCTAGGAAAATTTC  584
      ||||| || ||||||| |||| | ||||||||||
seq2  GCTTT-TG-ACCTTCTCTAGT-TTGGAAAATTTC  577