BAC Information

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BAC

Clone NameB6Ng01-166G18
Chromosome13 (Build37)
Map Location 39,415,990 - 39,416,215
singlet/doubletsinglet
Overlap genenone
Upstream geneBmp6, Txndc5, Muted, Eef1e1, LOC621102, Slc35b3
Downstream geneEG666867, LOC100041779, LOC382747, A230103O09Rik, Ofcc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166G18.g
ACCDH958210
length188
definitionDH958210|Mus musculus domesticus DNA, BAC clone: B6Ng01-166G18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tatacttcagagtccccaaaaggatgcaatgctttgatgctttgtgttct
ggtggcttttggaaagggaaaaatggatcagaacacacgggcgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtgtgtgtgtgtgc
gagatttttagtatgaatatgtacaaattttaatgtgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_39415990_39416215
seq2: B6Ng01-166G18.g_74_261

seq1  TATACTTCAGAGTCCCCAAAAGGATGCAATGCTTTGATGCTTTGTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCAGAGTCCCCAAAAGGATGCAATGCTTTGATGCTTTGTGTTCT  50

seq1  GGTGGCTTTTGGAAAGGGAAAAATGGATCAGAACACACACACACACACAC  100
      |||||||||||||||||||||||||||||||||||||             
seq2  GGTGGCTTTTGGAAAGGGAAAAATGGATCAGAACACA-------------  87

seq1  ACGCGCGCGCGCGCGCGCGCGCGCGCGCGCGTGTGTGTGTGTGTGTGTGT  150
                               || ||||||||||||||||||||||
seq2  -------------------------CGGGCGTGTGTGTGTGTGTGTGTGT  112

seq1  GTGTGTGTGTGTGTGTATGTATGTGTATGTGTGTGTTCCACATGTGTATT  200
      |||||||||||||||||||||||||| ||||||||| | | || | || |
seq2  GTGTGTGTGTGTGTGTATGTATGTGTGTGTGTGTGTGCGAGATTTTTAGT  162

seq1  ATAGATATGTACAAATTTATATGTGT  226
      ||  ||||||||||||||  ||||||
seq2  ATGAATATGTACAAATTTTAATGTGT  188


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