BAC Information

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BAC

Clone NameB6Ng01-167G03
Chromosome13 (Build37)
Map Location 47,409,177 - 47,410,327
singlet/doubletsinglet
Overlap genenone
Upstream geneRbm24, Cap2, C78339, Nup153, Kif13a, LOC544928, Nhlrc1, Tpmt, Aof1, Dek, LOC100039761, Ibrdc2
Downstream gene4931429P17Rik, Id4, LOC667351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167G03.bB6Ng01-167G03.g
ACCDH958898DH958899
length1,139988
definitionDH958898|Mus musculus domesticus DNA, BAC clone: B6Ng01-167G03, 5' end.DH958899|Mus musculus domesticus DNA, BAC clone: B6Ng01-167G03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagaaagcctagcagagaaatcatgccaagaacaatttcatta
gaacatgaatgtatgtgtcagttactgattcgctgctgtgaaaaatatct
gacaaaagcaagttgaagaaggaaggaaggaaggaaggaaggaaggaagg
aaggaaggaagggagggttcatttggtctcacagtgtgaggttacagtcc
atcggtcatggtgggagaaggaacactggcagcaatgtgtatagatggtc
acatttccagtcaggaaagctggtgctcccttgctttctatgtcttacac
ttacttaccaggactccagcctgtggcacggcgccgcccatgttcctgca
tgactctttccacctcacttaaacccctctgaaatgtcctcataaacatg
gtcagagatgtgtctcctaggtgattctaaatccagatacattgagaagg
aaggtggactgtcaccaggtgggaggctggctgaaacacaaacgctgttc
tccacaaaagtttcaataactaactcaactagatattaatccataataga
atgctgccatgaaatctggaatagaaaagtgtaatgatcacagtcaggaa
ggtggaagaccacgatacaccgttccctcgttgatacttctctgtggtct
tgttagtgtctcaataaatatctcctttctttcctttttttccttagata
atctcaagctggctggcaaatatgtccatctctttatatgctcatttttt
ttatataaagagagattagtacattttaagcttaattattaacctaagaa
atgcacaatgaacattcatttggaaacagagactctgggagaagagatga
tagggagacagaaataggattcacctgagatttctctctatgcctgacaa
agaaggtgccaatgcatatatatctctaacactgcaggatgtcacaattc
ccacaggaagcatagacaggaagagaagaatttaacactagaggacacag
gaggtcttgaggagcagtgtccacaactattgtgctatgactttacagtg
gaaaggagttgattctagaaagaagaagcttagtgggcgtgtagtaatgg
ctctgttggccaaagttgctgcttggaagatggaaacag

gaattcttggagaaaatatgtatttaaatgttttctgtaataatttggat
gtgaactatcttctgtgggtttatgtgtttgaacacttactccctagggg
aaggggctgtttggggaagtagagcaactgatcttttcgatacagagtct
aatcagctgatataggactatgcgttatactgggtcccagttttggccta
aactctttttcttggttgatgtagcaaggagcttctacacacacatccct
gccataatacagccgctcacaatatcctctctgctatgatgggctgtttc
cccccaaactgtgagtcaaaagacactgttccttccctcagcttgcttca
tttagacattttatcgcagtgacaagagaggtaactaatacagaaaatgg
agagtgagaagaggggttgctcatgaaagacttgactgtttagtccatcg
gccatttaaactgctgtacaggaggaacacagaagagcttggatctgtgg
accagagatgctctaggcctccgtatgcagaatctagtggcccattctac
cgggagcaatgcagacagacgagaatgtgtccatgagttttcagaaacag
gaactctactgggaattgggcaaaagagttcatccatgtgctggtctgaa
aaagactactcacagccttcctgtgtctcagaggtcagcgtgatggcaac
ttcaaaactaatggactgagatgcttggcaggacagatttcaaaacagca
taacatccaggctatggaatagttatttctaacttccttaagctagaaaa
cagacaaagagagagacagataaacatattggagaggaaaatatggggaa
aaggagtgagaatagggttaagtacagacaggagtttaactaacgtagat
agcaaagcaacttcgaggttagcacaactaagaaaaaaaatcacactctg
cacctgggaaagtatgtatggggtgaatgtattgtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_47409177_47410327
seq2: B6Ng01-167G03.b_48_1186

seq1  GAATTCTGAGAAAGCCTAGCAGAGAAATCATGCCAAGAACAATTTCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAAAGCCTAGCAGAGAAATCATGCCAAGAACAATTTCATTA  50

seq1  GAACATGAATGTATGTGTCAGTTACTGATTCGCTGCTGTGAAAAATATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAATGTATGTGTCAGTTACTGATTCGCTGCTGTGAAAAATATCT  100

seq1  GACAAAAGCAAGTTGAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGCAAGTTGAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG  150

seq1  AAGGAAGGAAGGGAGGGTTCATTTGGTCTCACAGTGTGAGGTTACAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGGAGGGTTCATTTGGTCTCACAGTGTGAGGTTACAGTCC  200

seq1  ATCGGTCATGGTGGGAGAAGGAACACTGGCAGCAATGTGTATAGATGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGTCATGGTGGGAGAAGGAACACTGGCAGCAATGTGTATAGATGGTC  250

seq1  ACATTTCCAGTCAGGAAAGCTGGTGCTCCCTTGCTTTCTATGTCTTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCAGTCAGGAAAGCTGGTGCTCCCTTGCTTTCTATGTCTTACAC  300

seq1  TTACTTACCAGGACTCCAGCCTGTGGCACGGCGCCGCCCATGTTCCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTACCAGGACTCCAGCCTGTGGCACGGCGCCGCCCATGTTCCTGCA  350

seq1  TGACTCTTTCCACCTCACTTAAACCCCTCTGAAATGTCCTCATAAACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTTCCACCTCACTTAAACCCCTCTGAAATGTCCTCATAAACATG  400

seq1  GTCAGAGATGTGTCTCCTAGGTGATTCTAAATCCAGATACATTGAGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGATGTGTCTCCTAGGTGATTCTAAATCCAGATACATTGAGAAGG  450

seq1  AAGGTGGACTGTCACCAGGTGGGAGGCTGGCTGAAACACAAACGCTGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGACTGTCACCAGGTGGGAGGCTGGCTGAAACACAAACGCTGTTC  500

seq1  TCCACAAAAGTTTCAATAACTAACTCAACTAGATATTAATCCATAATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAAAGTTTCAATAACTAACTCAACTAGATATTAATCCATAATAGA  550

seq1  ATGCTGCCATGAAATCTGGAATAGAAAAGTGTAATGATCACAGTCAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCCATGAAATCTGGAATAGAAAAGTGTAATGATCACAGTCAGGAA  600

seq1  GGTGGAAGACCACGATACACCGTTCCCTCGTTGATACTTCTCTGTGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAAGACCACGATACACCGTTCCCTCGTTGATACTTCTCTGTGGTCT  650

seq1  TGTTAGTGTCTCAATAAATATCTCCTTTCTTTCCTTTTTTTCCTTAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTGTCTCAATAAATATCTCCTTTCTTTCCTTTTTTTCCTTAGATA  700

seq1  ATCTCAAGCTGGCTGGCAAATATGTCCATCTCTTTATATGCTCATTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAGCTGGCTGGCAAATATGTCCATCTCTTTATATGCTCATTTTTT  750

seq1  TTATATAAAGAGAGATTAGTACATTTTAAGCTTAATTATTAACCTAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAAGAGAGATTAGTACATTTTAAGCTTAATTATTAACCTAAGAA  800

seq1  ATGCACAATGAACATTCATTTGGAAACAGAGACTCTGGGAGAAGAGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAATGAACATTCATTTGGAAACAGAGACTCTGGGAGAAGAGATGA  850

seq1  TAGGGAGACAGAAATAGGATTCACCTGAGATTTCTCTCTATGCCTGACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGACAGAAATAGGATTCACCTGAGATTTCTCTCTATGCCTGACAA  900

seq1  AGAAGGTGCCAATGCATATAATATCTCTAACACTGCAGGGATGTCACAAT  950
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  AGAAGGTGCCAATGCATAT-ATATCTCTAACACTGCA-GGATGTCACAAT  948

seq1  TCCCACAAGGAAGGCATAGACAGGAAGAAGAAAGAATTTAACACTAGAGG  1000
      |||||| ||||| |||||||||||||||   |||||||||||||||||||
seq2  TCCCAC-AGGAA-GCATAGACAGGAAGA--GAAGAATTTAACACTAGAGG  994

seq1  ACACAGGGAGGTCTTGAAGGAGCAGGTGT-CACAACTA-TGTGCTATGAC  1048
      ||||| |||||||||| ||||||| |||| |||||||| |||||||||||
seq2  ACACA-GGAGGTCTTG-AGGAGCA-GTGTCCACAACTATTGTGCTATGAC  1041

seq1  TTTTACAGGTGGAAAGGAGTTGA-TCTAGAAAG-AGAAGCTAGTTGGGCG  1096
       |||||| ||||||||||||||| ||||||||| |||||||   ||||||
seq2  -TTTACA-GTGGAAAGGAGTTGATTCTAGAAAGAAGAAGCTTAGTGGGCG  1089

seq1  TGAGGTAGATGGCTCTGTTGGCAAAGAGTTTGCTGCTTTGGGAAGATGGA  1146
      ||  ||| |||||||||||||| || || |||||||||  ||||||||||
seq2  TGTAGTA-ATGGCTCTGTTGGCCAA-AG-TTGCTGCTT--GGAAGATGGA  1134

seq1  GACAG  1151
       ||||
seq2  AACAG  1139


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