BAC Information

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BAC

Clone NameB6Ng01-167G09
Chromosome13 (Build37)
Map Location 6,967,528 - 7,078,899
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516, LOC791083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167G09.bB6Ng01-167G09.g
ACCDH958910DH958911
length977361
definitionDH958910|Mus musculus domesticus DNA, BAC clone: B6Ng01-167G09, 5' end.DH958911|Mus musculus domesticus DNA, BAC clone: B6Ng01-167G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,967,528 - 6,968,271)(7,078,539 - 7,078,899)
sequence
gaattcagtgtagggcagggtaggggggatttctctgggaactgctaatc
ttgttatggttatttttctgagaatagctcattttgttttggcagctgta
gacttagttattttgactgctatgttcctcaaagtcccttcagagaggaa
gcggctaggtggtcttgaaattattgcagattctacagtagttggcagga
ctgagacattctggtggtacatacatgaaaaaaaaaaaaggcatgacaat
tccccagcttttctccaagctttttagtggaccattagctgtggcctctc
cttcctctctgcctccgttcataggggattaagtatgacttctatagcct
tccttcctcactgtatcctttgttccaacccccaacactggagacacagt
ctccttttggaaactcactggtcatacattccagaaaatcaagtagacgg
tcctcacagtccttcctatagtccatttccaattgtccatttcttcccca
gccctccagcagacctcttgcagaggccttcttccccatcttcctccatt
ccttatgcactccacagttccttttgacaaacccagcattcctttctcct
gtgggccttctcagcctccctgtccttctagttcatctccaattcttttc
tgtcagctcctaatacacaggcagagatgcagagactcttccagagagta
caacagaaaccaaggaaaggaaaacacacctgacaacgataagaccagct
attaacacctagaattacaataatttcaagcccagatgcctagatgccag
tataaaaacaagccaggacaatatgtctttaatcaagcccagcaaccttt
tttatagcaggccctgagaaatgtaatatggctaaagcacaaaacaacaa
cttcaaaataactattataataggttcaattaccttaaagatgatatgga
taatttactaataaagtatatggacac

ttaaaacgattctccaaggtgaaggacacaacacgtatattcaatatttg
aggaaacttacatgtatttcatttcatttgagtttttctacaaaagcttc
tttatactgacccaagaacagtaggtaagattcccctagaagctgatgga
ctagtgaatggttctgctagtgtctcaaggctaagtggacatgcagttct
ctgccttccacctctcaggagttaaagtagatgcattcccttaacaaatc
ttaagtctaggaaaaacaaacaaacaactatacaatttctcaaaaagaaa
tctatgaagtttgcgtgtccaatgggcctctctttccggagtgggtgggt
aggggagtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_6967528_6968271
seq2: B6Ng01-167G09.b_46_789

seq1  GAATTCAGTGTAGGGCAGGGTAGGGGGGATTTCTCTGGGAACTGCTAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTAGGGCAGGGTAGGGGGGATTTCTCTGGGAACTGCTAATC  50

seq1  TTGTTATGGTTATTTTTCTGAGAATAGCTCATTTTGTTTTGGCAGCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATGGTTATTTTTCTGAGAATAGCTCATTTTGTTTTGGCAGCTGTA  100

seq1  GACTTAGTTATTTTGACTGCTATGTTCCTCAAAGTCCCTTCAGAGAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGTTATTTTGACTGCTATGTTCCTCAAAGTCCCTTCAGAGAGGAA  150

seq1  GCGGCTAGGTGGTCTTGAAATTATTGCAGATTCTACAGTAGTTGGCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTAGGTGGTCTTGAAATTATTGCAGATTCTACAGTAGTTGGCAGGA  200

seq1  CTGAGACATTCTGGTGGTACATACATGAAAAAAAAAAAAGGCATGACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACATTCTGGTGGTACATACATGAAAAAAAAAAAAGGCATGACAAT  250

seq1  TCCCCAGCTTTTCTCCAAGCTTTTTAGTGGACCATTAGCTGTGGCCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGCTTTTCTCCAAGCTTTTTAGTGGACCATTAGCTGTGGCCTCTC  300

seq1  CTTCCTCTCTGCCTCCGTTCATAGGGGATTAAGTATGACTTCTATAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTCTGCCTCCGTTCATAGGGGATTAAGTATGACTTCTATAGCCT  350

seq1  TCCTTCCTCACTGTATCCTTTGTTCCAACCCCCAACACTGGAGACACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTCACTGTATCCTTTGTTCCAACCCCCAACACTGGAGACACAGT  400

seq1  CTCCTTTTGGAAACTCACTGGTCATACATTCCAGAAAATCAAGTAGACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTGGAAACTCACTGGTCATACATTCCAGAAAATCAAGTAGACGG  450

seq1  TCCTCACAGTCCTTCCTATAGTCCATTTCCAATTGTCCATTTCTTCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACAGTCCTTCCTATAGTCCATTTCCAATTGTCCATTTCTTCCCCA  500

seq1  GCCCTCCAGCAGACCTCTTGCAGAGGCCTTCTTCCCCATCTTCCTCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCAGCAGACCTCTTGCAGAGGCCTTCTTCCCCATCTTCCTCCATT  550

seq1  CCTTATGCACTCCACAGTTCCTTTTGACAAACCCAGCATTCCTTTCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGCACTCCACAGTTCCTTTTGACAAACCCAGCATTCCTTTCTCCT  600

seq1  GTGGGCCTTCTCAGCCTCCCTGTCCTTCTAGTTCATCTCCAATTCTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCTTCTCAGCCTCCCTGTCCTTCTAGTTCATCTCCAATTCTTTTC  650

seq1  TGTCAGCTCCTAATACACAGGCAGAGATGCAGAGACTCTTCCAGAGAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCTCCTAATACACAGGCAGAGATGCAGAGACTCTTCCAGAGAGTA  700

seq1  CAACAGAAACCAAGGAAAGGAAAACACACCTGACAACGATAAGA  744
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAAACCAAGGAAAGGAAAACACACCTGACAACGATAAGA  744


seq1: chr13_7078539_7078899
seq2: B6Ng01-167G09.g_72_432 (reverse)

seq1  CCCACTCCCCTACCCACCCACTCCGGAAAGAGAGGCCCATTGGACACGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCCCTACCCACCCACTCCGGAAAGAGAGGCCCATTGGACACGCA  50

seq1  AACTTCATAGATTTCTTTTTGAGAAATTGTATAGTTGTTTGTTTGTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATAGATTTCTTTTTGAGAAATTGTATAGTTGTTTGTTTGTTTTT  100

seq1  CCTAGACTTAAGATTTGTTAAGGGAATGCATCTACTTTAACTCCTGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACTTAAGATTTGTTAAGGGAATGCATCTACTTTAACTCCTGAGAG  150

seq1  GTGGAAGGCAGAGAACTGCATGTCCACTTAGCCTTGAGACACTAGCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGGCAGAGAACTGCATGTCCACTTAGCCTTGAGACACTAGCAGAA  200

seq1  CCATTCACTAGTCCATCAGCTTCTAGGGGAATCTTACCTACTGTTCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCACTAGTCCATCAGCTTCTAGGGGAATCTTACCTACTGTTCTTGG  250

seq1  GTCAGTATAAAGAAGCTTTTGTAGAAAAACTCAAATGAAATGAAATACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTATAAAGAAGCTTTTGTAGAAAAACTCAAATGAAATGAAATACAT  300

seq1  GTAAGTTTCCTCAAATATTGAATATACGTGTTGTGTCCTTCACCTTGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTTCCTCAAATATTGAATATACGTGTTGTGTCCTTCACCTTGGAG  350

seq1  AATCGTTTTAA  361
      |||||||||||
seq2  AATCGTTTTAA  361


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