BAC Information

Click to search

BAC

Clone NameB6Ng01-168B14
Chromosome13 (Build37)
Map Location 10,551,021 - 10,552,100
singlet/doubletsinglet
Overlap genenone
Upstream geneDip2c, LOC666986, Zmynd11, Chrm3, LOC100039604
Downstream geneLOC100039648
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168B14.bB6Ng01-168B14.g
ACCDH959427DH959428
length1,0941,154
definitionDH959427|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B14, 5' end.DH959428|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatcctccgtaagtacaccaacggttctccaacactgacccat
ctctctagcctaccaaggtttatttttataatgtttgcaatacagatatg
ccgtctttttgaaataatactgatacacttttgggttttctactgtgtta
aattgactcagccacacacattaaccttgtaagatggagcaactttggaa
aatgctgaattttcttttcagttaaatcttaagggtgagattctaacaca
gttactaatgaaatattggactggcctttttgaaactatacttgttaatg
gtacacttacatgacccttaaatgttactttttctattttaattaaaata
attcatgccaaagggaagtattgtgatttttacaattacagataggtatt
tattaaaagcaaaaacaaagaattggaaacaacacacccccatggattct
gcctcatgtcaacagaacaagcagactgcatcttcaattttccttgaaat
acagattaattatagatgattgacagcaatctctctcatagtctatggaa
tacggaataagagactttacctccatactcagtgtagctttatttaaagt
cgatgatgatagtgacagcgatgataaaatcaatgacaaaatgtcattca
ttagttgatagagagagcttgtaaattactaaatcagctttaaacacata
tgcatatgtagacaagcagtactaaaattaactcagaaggttatacaggt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacacatatgtataagt
aaatgcatatcaattaatgcagttcttctctctttgcccatgaatttgag
aggtttttgagtgaataccagaagttgggagaagagaaaggtagatttaa
aattgtgtatgaaatttcttcctttaaaatgtaataaattaaattttaac
atatatatctagagtcatgtttgctaatatgagctagagagcacttgtct
ttctgccaaaggtatagaaatatcaaattggtcccttttatttcaacccc
acatacttctgcctgggtcttctatttctccttagggggaagaa
gaattctcacctgaggaataccgaatggcagagaagtacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagttgccccaactggtaagaaggacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaagaatggatacagaaaatgtgatacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggtcctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagaatgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccatttccatacactagcaagattttatcaga
aggacccagatgtagctgtctcttgtgagactatactggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagacccaaggagctaaagggatctgcactcta
tagtggaacacattatgactaacagtacccgagctcttgactctagctgc
atatgtatcaaaagatgctaatagcatcactgtaaggaagccattgtacc
ctcaacttatatgtccagtacagggtaacgcaggccaaaagggatgtgct
ggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_10551021_10552100
seq2: B6Ng01-168B14.b_46_1139 (reverse)

seq1  TTCTT-CCCCTAAGGAG-AATAGAAGAACCAGGCAG-AGTATGT-GGGTT  46
      ||||| ||||||||||| ||||||||| |||||||| ||||||| |||||
seq2  TTCTTCCCCCTAAGGAGAAATAGAAGACCCAGGCAGAAGTATGTGGGGTT  50

seq1  GAAAT-AAAGGGAC--AATTGATATTTTCTATA-CTTTGGCAGAAAGACA  92
      ||||| ||||||||  | |||||| |||||||| ||||||||||||||||
seq2  GAAATAAAAGGGACCAATTTGATA-TTTCTATACCTTTGGCAGAAAGACA  99

seq1  AGTGCTCTCTAGCTCATATAAGCAAACATGACTCT-GATATATATG-TAA  140
      ||||||||||||||||||| ||||||||||||||| |||||||||| |||
seq2  AGTGCTCTCTAGCTCATATTAGCAAACATGACTCTAGATATATATGTTAA  149

seq1  AATTAATTTAATTACCTTTTTAAAGGAG-AATTTCATACACAATTTTAAT  189
      |||| | || ||||| |||| || | || |||||||||||||||||||| 
seq2  AATTTAATTTATTACATTTTAAAGGAAGAAATTTCATACACAATTTTAAA  199

seq1  TCTACCTTTCTCTTCT-CCAACTTCTGGTATTCACTC-AAAACCTCTCAA  237
      |||||||||||||||| |||||||||||||||||||| ||||||||||||
seq2  TCTACCTTTCTCTTCTCCCAACTTCTGGTATTCACTCAAAAACCTCTCAA  249

seq1  ATTCAT-GGCCAAGAGGGAAG-ACTGCATTAATTGTTATGCATTTACTTA  285
      |||||| ||| ||||| |||| ||||||||||||| ||||||||||||||
seq2  ATTCATGGGCAAAGAGAGAAGAACTGCATTAATTGATATGCATTTACTTA  299

seq1  TACATATGTGTACACACACACACACACACACACACACACACACACACCTG  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGTGTACACACACACACACACACACACACACACACACACACCTG  349

seq1  TATAACCTTCTGAGTTAATTTTAGTACTGCTTGTCTACATATGCATATGT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCTTCTGAGTTAATTTTAGTACTGCTTGTCTACATATGCATATGT  399

seq1  GTTTAAAGCTGATTTAGTAATTTACAAGCTCTCTCTATCAACTAATGAAT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGCTGATTTAGTAATTTACAAGCTCTCTCTATCAACTAATGAAT  449

seq1  GACATTTTGTCATTGATTTTATCATCGCTGTCACTATCATCATCGACTTT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTGTCATTGATTTTATCATCGCTGTCACTATCATCATCGACTTT  499

seq1  AAATAAAGCTACACTGAGTATGGAGGTAAAGTCTCTTATTCCGTATTCCA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGCTACACTGAGTATGGAGGTAAAGTCTCTTATTCCGTATTCCA  549

seq1  TAGACTATGAGAGAGATTGCTGTCAATCATCTATAATTAATCTGTATTTC  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTATGAGAGAGATTGCTGTCAATCATCTATAATTAATCTGTATTTC  599

seq1  AAGGAAAATTGAAGATGCAGTCTGCTTGTTCTGTTGACATGAGGCAGAAT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAATTGAAGATGCAGTCTGCTTGTTCTGTTGACATGAGGCAGAAT  649

seq1  CCATGGGGGTGTGTTGTTTCCAATTCTTTGTTTTTGCTTTTAATAAATAC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGGGTGTGTTGTTTCCAATTCTTTGTTTTTGCTTTTAATAAATAC  699

seq1  CTATCTGTAATTGTAAAAATCACAATACTTCCCTTTGGCATGAATTATTT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGTAATTGTAAAAATCACAATACTTCCCTTTGGCATGAATTATTT  749

seq1  TAATTAAAATAGAAAAAGTAACATTTAAGGGTCATGTAAGTGTACCATTA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAAATAGAAAAAGTAACATTTAAGGGTCATGTAAGTGTACCATTA  799

seq1  ACAAGTATAGTTTCAAAAAGGCCAGTCCAATATTTCATTAGTAACTGTGT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATAGTTTCAAAAAGGCCAGTCCAATATTTCATTAGTAACTGTGT  849

seq1  TAGAATCTCACCCTTAAGATTTAACTGAAAAGAAAATTCAGCATTTTCCA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCTCACCCTTAAGATTTAACTGAAAAGAAAATTCAGCATTTTCCA  899

seq1  AAGTTGCTCCATCTTACAAGGTTAATGTGTGTGGCTGAGTCAATTTAACA  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCTCCATCTTACAAGGTTAATGTGTGTGGCTGAGTCAATTTAACA  949

seq1  CAGTAGAAAACCCAAAAGTGTATCAGTATTATTTCAAAAAGACGGCATAT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAAAACCCAAAAGTGTATCAGTATTATTTCAAAAAGACGGCATAT  999

seq1  CTGTATTGCAAACATTATAAAAATAAACCTTGGTAGGCTAGAGAGATGGG  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTGCAAACATTATAAAAATAAACCTTGGTAGGCTAGAGAGATGGG  1049

seq1  TCAGTGTTGGAGAACCGTTGGTGTACTTACGGAGGATCTGAATTC  1080
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTGGAGAACCGTTGGTGTACTTACGGAGGATCTGAATTC  1094