BAC Information

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BAC

Clone NameB6Ng01-169B06
Chromosome13 (Build37)
Map Location 81,307,850 - 81,308,855
singlet/doubletsinglet
Overlap geneGpr98
Upstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984
Downstream geneLysmd3, Polr3g, 2900024O10Rik, Cetn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169B06.bB6Ng01-169B06.g
ACCDH960149DH960150
length1,0421,020
definitionDH960149|Mus musculus domesticus DNA, BAC clone: B6Ng01-169B06, 5' end.DH960150|Mus musculus domesticus DNA, BAC clone: B6Ng01-169B06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaagcatgtatgttctctagggactgcttctaatatccatgtc
agggtagccaggaattttagagtttgccaactccatccctgctctgtccc
cacttaccggcacacacatcttcgtgtgcatttaggatggatactcttca
ttttccctccaatggcttatcctcaggaagtgtgagaaagtctcacgtcg
tcatctgcctcgatcagttcttctgatctcaatattatttctcatgcttt
tcattcttgttgtttttgcacttaggagaactgtgtaatttctttcactc
tctagtcatagccactcagatcactggtaatcagaagtgaatcaacagaa
ccttgaaggtttctgaaattctgctctcatgagtctatagccacactgaa
ttagaatctttggtgatggtttcccatctgccgttgcttttagatgtgtg
gtaccctacagttctgtgtctgcactgtgtctctgcccctccacttacac
tgtgggaggtgctctcctggtactcctttgccttgggcctttccagtcat
ttacttagactgctgccattgtgggtggggggctgctcttgcttcctctc
atcagcctgtttactttcctgggagataaagctctctttcagtcatgggt
acctcgttttttgtttgtttgttttttgtttgtttgtttgtttgtttgtt
tgtttgtttgtttcagaaatgtgaaagggctctctctatgtgatggacta
tcattctgcatagctggtccattgctatgagattcttctcattactcact
tctgtgagcttttaatggtagccaaaaggaacaacctactcagacttaga
aatgtgcctttcaccttttatatgctattcttattcctctaacctcaata
ttgacttgtttgcctgccttcaaggccaagacaataagctccagtcttca
tcttcatgaatgcattccctactctactggagccaagacctgtggggttc
atattcccattaaagttacctacccccgacccccccgacccc
gaattcaaattccatttacagagcaagttccatgacagccaagcttagac
agtgaaggagttggaaatgaaagctagtaataatgaacaagtgggccatg
ttccagctccaataagcagtagacctcagccacttggaccgtgtggctct
ggctttagaatcaagaatagaatgactactgggaaaattgatgttgatta
gcaggagctaagaaattatcagtgattaagagaccagtgtcactgtggtg
acatgctttctgaaaggaaacaaaaaaaacaaaacaacaaaaaaaaggct
gtgttccagtgttccagaaatagctggatttggtagtatgtaagaatcac
ccaaatggtactggttttttagacatgatggagtcatggagagcagctaa
ggcttggcactgtgagagcccaggagaggcctggtgaaggtacagcctca
gttgcagttgacaacccaggactggaagggtcatgcaaagaagttgaggc
ttggcaccatgaagagagcctatgagaggttattggtgaagtatagttgc
aacagtagaccctagtgttttggagatgccaatatcaagaacagcggcag
cagtggaatggagtcaaccagagtgcatagttagagatgtgacccaagcc
atttggaggagaccagaaactggaacaagaagctgtaatgttgaagttgt
cttggagaccccaagatgttcgaggtgccagggctgtggtatacctgctg
aggaaagctgctaacagcaagtggaaccatccaaagagaactgtgctgca
gtcaacaaagcagaaaggagttggacattagacacggagtgatgagtttg
gagtttgtccagctgaattttggtcttgctttggtctattatttcctcat
atgaagttttgaaatggtaatgtatatcatgtgatgttggagtatgtgat
ctgctttttgatctgagtttataggagtcctttagtatttagaatgaacc
tcagaggagagtttaacatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81307850_81308855
seq2: B6Ng01-169B06.b_46_1051 (reverse)

seq1  GAATATGTA-CCCACAGGTCCTTGGCTCCAGTAGAGTTAGGAATGCATTC  49
      ||||||| | ||||||||| |||||||||||||||||  |||||||||||
seq2  GAATATGAACCCCACAGGT-CTTGGCTCCAGTAGAGTAGGGAATGCATTC  49

seq1  ATGAAGATGAAGACTGGAGCTTATTGTCTTGGCCTTGAAGGCAGGCAAAC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGATGAAGACTGGAGCTTATTGTCTTGGCCTTGAAGGCAGGCAAAC  99

seq1  AAGTCAATATTGAGGTTAGAGGAATAAGAATAGCATATAAAAGGTGAAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAATATTGAGGTTAGAGGAATAAGAATAGCATATAAAAGGTGAAAG  149

seq1  GCACATTTCTAAGTCTGAGTAGGTTGTTCCTTTTGGCTACCATTAAAAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTCTAAGTCTGAGTAGGTTGTTCCTTTTGGCTACCATTAAAAGC  199

seq1  TCACAGAAGTGAGTAATGAGAAGAATCTCATAGCAATGGACCAGCTATGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAGTGAGTAATGAGAAGAATCTCATAGCAATGGACCAGCTATGC  249

seq1  AGAATGATAGTCCATCACATAGAGAGAGCCCTTTCACATTTCTGAAACAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATAGTCCATCACATAGAGAGAGCCCTTTCACATTTCTGAAACAA  299

seq1  ACAAACAAACAAACAAACAAACAAACAAACAAAAAACAAACAAACAAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAACAAACAAACAAACAAAAAACAAACAAACAAAAA  349

seq1  ACGAGGTACCCATGACTGAAAGAGAGCTTTATCTCCCAGGAAAGTAAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGTACCCATGACTGAAAGAGAGCTTTATCTCCCAGGAAAGTAAACA  399

seq1  GGCTGATGAGAGGAAGCAAGAGCAGCCCCCCACCCACAATGGCAGCAGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATGAGAGGAAGCAAGAGCAGCCCCCCACCCACAATGGCAGCAGTC  449

seq1  TAAGTAAATGACTGGAAAGGCCCAAGGCAAAGGAGTACCAGGAGAGCACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAATGACTGGAAAGGCCCAAGGCAAAGGAGTACCAGGAGAGCACC  499

seq1  TCCCACAGTGTAAGTGGAGGGGCAGAGACACAGTGCAGACACAGAACTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAGTGTAAGTGGAGGGGCAGAGACACAGTGCAGACACAGAACTGT  549

seq1  AGGGTACCACACATCTAAAAGCAACGGCAGATGGGAAACCATCACCAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACCACACATCTAAAAGCAACGGCAGATGGGAAACCATCACCAAAG  599

seq1  ATTCTAATTCAGTGTGGCTATAGACTCATGAGAGCAGAATTTCAGAAACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATTCAGTGTGGCTATAGACTCATGAGAGCAGAATTTCAGAAACC  649

seq1  TTCAAGGTTCTGTTGATTCACTTCTGATTACCAGTGATCTGAGTGGCTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGTTCTGTTGATTCACTTCTGATTACCAGTGATCTGAGTGGCTAT  699

seq1  GACTAGAGAGTGAAAGAAATTACACAGTTCTCCTAAGTGCAAAAACAACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGAGAGTGAAAGAAATTACACAGTTCTCCTAAGTGCAAAAACAACA  749

seq1  AGAATGAAAAGCATGAGAAATAATATTGAGATCAGAAGAACTGATCGAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAAAAGCATGAGAAATAATATTGAGATCAGAAGAACTGATCGAGG  799

seq1  CAGATGACGACGTGAGACTTTCTCACACTTCCTGAGGATAAGCCATTGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGACGACGTGAGACTTTCTCACACTTCCTGAGGATAAGCCATTGGA  849

seq1  GGGAAAATGAAGAGTATCCATCCTAAATGCACACGAAGATGTGTGTGCCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATGAAGAGTATCCATCCTAAATGCACACGAAGATGTGTGTGCCG  899

seq1  GTAAGTGGGGACAGAGCAGGGATGGAGTTGGCAAACTCTAAAATTCCTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGGGGACAGAGCAGGGATGGAGTTGGCAAACTCTAAAATTCCTGG  949

seq1  CTACCCTGACATGGATATTAGAAGCAGTCCCTAGAGAACATACATGCTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTGACATGGATATTAGAAGCAGTCCCTAGAGAACATACATGCTTT  999

seq1  GGAATTC  1006
      |||||||
seq2  GGAATTC  1006