BAC Information

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BAC

Clone NameB6Ng01-172P05
Chromosome13 (Build37)
Map Location 48,117,647 - 48,250,026
singlet/doubletdoublet
Overlap genenone
Upstream geneTpmt, Aof1, Dek, LOC100039761, Ibrdc2, 4931429P17Rik
Downstream geneId4, LOC667351, Zfp169, A830005F24Rik, AW456874, Barx1, Phf2, EG667415, BC010304, C030044B11Rik, Wnk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172P05.bB6Ng01-172P05.g
ACCGA001432GA001433
length961165
definitionB6Ng01-172P05.b B6Ng01-172P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,117,647 - 48,118,602)(48,249,862 - 48,250,026)
sequence
gaattctcagctccaacagggccatgactgcctggatgctgcagtgcttc
ctgccttgaactgaacctctgaacctgtaagctaaccccagttaaatgtt
gtcctttataagagttgccttggtcatggtgtcggttcacagcaatggaa
accgtaactaagatataaatatagactttttataaatgtatatgcttgtg
ttgatttctctctttatatcacaaactttaaagagagagaatgtgtacca
attcattcttcactctttacaagacaacacaagtcctggtatgtgcttgt
tgataagtgtgtattttgcttggagacacaatgcttatcaaggtacagac
tccatgggacacaggtgacaggacagggacttttcactccctgttctaat
ccccacagaagaatggctgaggacgaacaattcaggaagggtttgagtct
gtgtgtggagtgatggagaaatcttactttgtatttgttttgctttggtc
ttgtttcagggttttaacgagttgtggttttaggagctctcgaagctaca
tgttcacatgtttaactgggtacatgggccatttggctgtcacccttcgt
gcttaaagtgcaaatcatgctggaagtcactctcatgaaatctgaaatat
ggcgacttacagatgcataatttttcagaactgtgcttgagagagagaaa
gaagggagaaagagaatgggagacacacacacacacacacacacacagag
agagagagagagagagagagagagagagagagagaggactgatatttttt
gctaaagaagggaaatgaaggagaaatctgttctagtttttgtgagctag
gaagagcgtgggcatgcacatctgttcacatggcaaagagcagcatcact
tgaagggctacgcagcatgcacatgcctagagaaggggttcctcagaagg
gagggttgggc
ttctttctagccagggcttcaagtaggaagaaactaatgacttcattacc
atctcaattctgggaaatgcagccccagacctgactcattaaagggaagg
tatagaccttacaatatcaaaatgttatttagggctatgcccttagtgca
tggggggtggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_48117647_48118602
seq2: B6Ng01-172P05.b_37_997

seq1  GAATTCTCAGCTCCAACAGGGCCATGACTGCCTGGATGCTGCAGTGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCTCCAACAGGGCCATGACTGCCTGGATGCTGCAGTGCTTC  50

seq1  CTGCCTTGAACTGAACCTCTGAACCTGTAAGCTAACCCCAGTTAAATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTGAACTGAACCTCTGAACCTGTAAGCTAACCCCAGTTAAATGTT  100

seq1  GTCCTTTATAAGAGTTGCCTTGGTCATGGTGTCGGTTCACAGCAATGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTATAAGAGTTGCCTTGGTCATGGTGTCGGTTCACAGCAATGGAA  150

seq1  ACCGTAACTAAGATATAAATATAGACTTTTTATAAATGTATATGCTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTAACTAAGATATAAATATAGACTTTTTATAAATGTATATGCTTGTG  200

seq1  TTGATTTCTCTCTTTATATCACAAACTTTAAAGAGAGAGAATGTGTACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCTCTCTTTATATCACAAACTTTAAAGAGAGAGAATGTGTACCA  250

seq1  ATTCATTCTTCACTCTTTACAAGACAACACAAGTCCTGGTATGTGCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCTTCACTCTTTACAAGACAACACAAGTCCTGGTATGTGCTTGT  300

seq1  TGATAAGTGTGTATTTTGCTTGGAGACACAATGCTTATCAAGGTACAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGTGTGTATTTTGCTTGGAGACACAATGCTTATCAAGGTACAGAC  350

seq1  TCCATGGGACACAGGTGACAGGACAGGGACTTTTCACTCCCTGTTCTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGGACACAGGTGACAGGACAGGGACTTTTCACTCCCTGTTCTAAT  400

seq1  CCCCACAGAAGAATGGCTGAGGACGAACAATTCAGGAAGGGTTTGAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAGAAGAATGGCTGAGGACGAACAATTCAGGAAGGGTTTGAGTCT  450

seq1  GTGTGTGGAGTGATGGAGAAATCTTACTTTGTATTTGTTTTGCTTTGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGGAGTGATGGAGAAATCTTACTTTGTATTTGTTTTGCTTTGGTC  500

seq1  TTGTTTCAGGGTTTTAACGAGTTGTGGTTTTAGGAGCTCTCGAAGCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCAGGGTTTTAACGAGTTGTGGTTTTAGGAGCTCTCGAAGCTACA  550

seq1  TGTTCACATGTTTAACTGGGTACATGGGCCATTTGGCTGTCACCCTTCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACATGTTTAACTGGGTACATGGGCCATTTGGCTGTCACCCTTCGT  600

seq1  GCTTAAAGTGCAAATCATGCTGGAAGTCACTCTCATGAAATCTGAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAGTGCAAATCATGCTGGAAGTCACTCTCATGAAATCTGAAATAT  650

seq1  GGCGACTTACAGATGCATAATTTTTCAGAACTGTGCTTGAGAGAGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACTTACAGATGCATAATTTTTCAGAACTGTGCTTGAGAGAGAGAAA  700

seq1  GAAGGGAGAAAGAGAATGGGAGACACACACACACACACACACACACAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGAAAGAGAATGGGAGACACACACACACACACACACACACAGAG  750

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGACTGATA-TTTTT  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGACTGATATTTTTT  800

seq1  GCTAAAGAAGGGAAATGAAGGAGAAATCTGTTCTAG-TTTTGGGAGCTAG  848
      |||||||||||||||||||||||||||||||||||| ||||| |||||||
seq2  GCTAAAGAAGGGAAATGAAGGAGAAATCTGTTCTAGTTTTTGTGAGCTAG  850

seq1  GAAGAGCGTGGGCATGCACATCTGTTCACATGGCAAAGAGCAGCATCA-G  897
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  GAAGAGCGTGGGCATGCACATCTGTTCACATGGCAAAGAGCAGCATCACT  900

seq1  TGAAGGGCTAGGCAGCATGCAGATG-CTAGAGAAGGGGGTTCTCAG-AGG  945
      |||||||||| |||||||||| ||| |||||||||||| | ||||| |||
seq2  TGAAGGGCTACGCAGCATGCACATGCCTAGAGAAGGGGTTCCTCAGAAGG  950

seq1  GAGGGTTGGGC  956
      |||||||||||
seq2  GAGGGTTGGGC  961

seq1: chr13_48249862_48250026
seq2: B6Ng01-172P05.g_69_233 (reverse)

seq1  CCACCCCACCCCCCATGCACTAAGGGCATAGCCCTAAATAACATTTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCACCCCCCATGCACTAAGGGCATAGCCCTAAATAACATTTTGAT  50

seq1  ATTGTAAGGTCTATACCTTCCCTTTAATGAGTCAGGTCTGGGGCTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAGGTCTATACCTTCCCTTTAATGAGTCAGGTCTGGGGCTGCATT  100

seq1  TCCCAGAATTGAGATGGTAATGAAGTCATTAGTTTCTTCCTACTTGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAATTGAGATGGTAATGAAGTCATTAGTTTCTTCCTACTTGAAGC  150

seq1  CCTGGCTAGAAAGAA  165
      |||||||||||||||
seq2  CCTGGCTAGAAAGAA  165