BAC Information

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BAC

Clone NameB6Ng01-174F13
Chromosome13 (Build37)
Map Location 52,183,351 - 52,184,184
singlet/doubletsinglet
Overlap genenone
Upstream geneSpin1, 4930519N16Rik, EG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3, Cks2, Secisbp2, Sema4d, Gadd45g
Downstream geneLOC100040321, Diras2, LOC100040572, Syk, Auh, Nfil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174F13.bB6Ng01-174F13.g
ACCGA002452GA002453
length8411,202
definitionB6Ng01-174F13.b B6Ng01-174F13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttcacggattgtatgagatcttccctggattaatcattctca
attttatttccttatttagaaaaaaaagtagaattttttttttcaaaaaa
aaaatccatgtattttccaaacagccctagttcaggaacttccttcacga
attactattattgttattttttttatgcaaagcctggaaaaactccacag
aggaaaagagcaaccacacccggggctccgtggaaggtctgaggtcatac
tctgagagatgctggagaggagggggaggggaagacgagggagaatggag
cgggagggaacactaatctacctcctccaccaggagtcctagatcaagtg
cagaagctcagagatgctgctgaggcgcaagggagcctggcctctatctg
cagtgtacagtctatagacggctcagctggaattctaaaatcccaagagg
ctggcagcggagatggctcagtcatcactgctcccagatgcagacctgag
gacctgggtttaatgcacaggacttgagaaggggtgcatgcctgacatcc
cagcgctgctgatgcagagactggaggctcccgggctcattctggcagcc
agtctagctagattggtgacctccaaagataaggtggagaggggtctgag
gaagacacttgacatcaatctctgacttccacgtatgcatacatgcatac
gctcacaaatgcttcacacgaagccccaggagtcaaagaatgcacagtgg
ggctgggtgatgtcataggaagcaagtgtgcatcctcctggtccctggtt
cctgggcacacagctttttgaaaccctttggaagtctccca
gaattcagaacttttcagctggggaacgagagtaccagtgagtatgtttg
gccttgaattttttctggtgttaggagcccttttgttctttttcacatgc
tatcaagtgattaagatagggctgaaaattctagaggaaattcaggacaa
gctatcagaagtaaagcgggaagaaagagtaggaacaaagagaaaatatg
gttcacaaaataagtatacaggcctttccaagggtcttgaacccgaggaa
aagttaaggttaggtaggaatacctggagagagattagaagaaaaagagg
aaaaagggagaagaaaaaagatcgattagcggaggtctctaggagatact
cgtcactagatgagctcaggaagccagctcttagtagctctgaagcagat
gaagaatcctcctctgaggaaacagactgggaggaagaagcagcccatta
ccagccagctaatcggtcaagaaaaaagccaaaagcggctggcgaaggcc
agtttgctaattggcctcagggcaatcggctaccaggtgcactcccgccc
tatgcggagtccccgccctgcgtagtgcgtcagcccgtagtgcgtcagca
atgcgcagagaggcagtgcgcagactcattcattccccgagaggaacaaa
ggaaaatagaacaggcatttccagtctttgaaggagccgagggtgggcgt
gtccacgctccggtagaatacgtacagattaaggaaattgccgagtcggt
tcgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggc
tcgctggcatggcactaactcctgctgactggcaaacggttgtaaaagcc
gctctccctagtatgggcaaatatatggaatggaaaagcgctttggcacg
aagctgcaacaggcgcaggcccgagcaaacgcagctgctttaactccaga
gcagagagattggactttttgacttgttaacgggtcagagagcttattct
gctaaacctgataagagtatcaatggaagtcttactacagggatgtccaa
tagttcctataaatgtgccagcctttatatgcaagaagctcttttgccag
tggaggtaaccatcccctctttgattttggcctcctgacatggatgacat
cctctggtcctataaagaaccttaccatgcctacaaaaaaggcaatatat
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_52183351_52184184
seq2: B6Ng01-174F13.b_44_884 (reverse)

seq1  TGGGAGACT--CCAAGGGTTTC-AAAAGCTGTGTG-CCAGGAACCAGGGA  46
      |||||||||  | ||||||||| |||||||||||| ||||||||||||||
seq2  TGGGAGACTTCCAAAGGGTTTCAAAAAGCTGTGTGCCCAGGAACCAGGGA  50

seq1  CCAGGAGGATGCACACTTGCTTCCTATGACATCACCCAG-CCCACTGTGC  95
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCAGGAGGATGCACACTTGCTTCCTATGACATCACCCAGCCCCACTGTGC  100

seq1  ATTCTTTGACTCCTGGGGCTTCGTGTG-AGCATTTGTGAGCGTATGCATG  144
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTCTTTGACTCCTGGGGCTTCGTGTGAAGCATTTGTGAGCGTATGCATG  150

seq1  TATGCATACGTGGAAGTCAGAGATTGATGTCAAGTGTCTTCCTCAGA-CC  193
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATGCATACGTGGAAGTCAGAGATTGATGTCAAGTGTCTTCCTCAGACCC  200

seq1  CTCTCCACCTTATCTTTGGAGGTCACCAATCTAGCTAGACTGGCTGCCAG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACCTTATCTTTGGAGGTCACCAATCTAGCTAGACTGGCTGCCAG  250

seq1  AATGAGCCCGGGAGCCTCCAGTCTCTGCATCAGCAGCGCTGGGATGTCAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCCCGGGAGCCTCCAGTCTCTGCATCAGCAGCGCTGGGATGTCAG  300

seq1  GCATGCACCCCTTCTCAAGTCCTGTGCATTAAACCCAGGTCCTCAGGTCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACCCCTTCTCAAGTCCTGTGCATTAAACCCAGGTCCTCAGGTCT  350

seq1  GCATCTGGGAGCAGTGATGACTGAGCCATCTCCGCTGCCAGCCTCTTGGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGGGAGCAGTGATGACTGAGCCATCTCCGCTGCCAGCCTCTTGGG  400

seq1  ATTTTAGAATTCCAGCTGAGCCGTCTATAGACTGTACACTGCAGATAGAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGAATTCCAGCTGAGCCGTCTATAGACTGTACACTGCAGATAGAG  450

seq1  GCCAGGCTCCCTTGCGCCTCAGCAGCATCTCTGAGCTTCTGCACTTGATC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCTCCCTTGCGCCTCAGCAGCATCTCTGAGCTTCTGCACTTGATC  500

seq1  TAGGACTCCTGGTGGAGGAGGTAGATTAGTGTTCCCTCCCGCTCCATTCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTCCTGGTGGAGGAGGTAGATTAGTGTTCCCTCCCGCTCCATTCT  550

seq1  CCCTCGTCTTCCCCTCCCCCTCCTCTCCAGCATCTCTCAGAGTATGACCT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGTCTTCCCCTCCCCCTCCTCTCCAGCATCTCTCAGAGTATGACCT  600

seq1  CAGACCTTCCACGGAGCCCCGGGTGTGGTTGCTCTTTTCCTCTGTGGAGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTTCCACGGAGCCCCGGGTGTGGTTGCTCTTTTCCTCTGTGGAGT  650

seq1  TTTTCCAGGCTTTGCATAAAAAAAATAACAATAATAGTAATTCGTGAAGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGGCTTTGCATAAAAAAAATAACAATAATAGTAATTCGTGAAGG  700

seq1  AAGTTCCTGAACTAGGGCTGTTTGGAAAATACATGGATTTTTTTTTTGAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTGAACTAGGGCTGTTTGGAAAATACATGGATTTTTTTTTTGAA  750

seq1  AAAAAAAATTCTACTTTTTTTTCTAAATAAGGAAATAAAATTGAGAATGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATTCTACTTTTTTTTCTAAATAAGGAAATAAAATTGAGAATGA  800

seq1  TTAATCCAGGGAAGATCTCATACAATCCGTGAAAAGAATTC  834
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCAGGGAAGATCTCATACAATCCGTGAAAAGAATTC  841