BAC Information

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BAC

Clone NameB6Ng01-175E11
Chromosome13 (Build37)
Map Location 9,546,574 - 9,547,510
singlet/doubletsinglet
Overlap geneDip2c
Upstream geneAdarb2, Wdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719
Downstream geneLOC666986, Zmynd11, Chrm3, LOC100039604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175E11.bB6Ng01-175E11.g
ACCGA003125GA003126
length1,238946
definitionB6Ng01-175E11.b B6Ng01-175E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgacaatgaagacatatcatacccgaacttttgggacacaat
gaaaattggggaaaattcatagcactaaatgccttcataaagaaattgga
gagatcccatacaagcaacttaacagcacacctgaaagctctagaacaga
aagaaccaaatacacccaagaagagtaaacagcaggaaacagtcaaactc
agggctggaatcaactagttaagaaacaaagagaactatacaaaggatac
aaagaatcaacaaaaccaagaactggttctttgagaaaaatcaacaagat
aaataaacccttagccaaactaactaaagggcacagagacagtatccaaa
taaacaaaatcagaaatgaaaaggaatacataataaaaactgaggaaatt
ttaaaaaattaccagaacctactacaaaaacctatactctacaataaata
aataaataaataaataaataaataaataaataaataaaacaaaaaaaact
agatgaaatggatgatcttctagacagatactacataccaaagttaaatc
aagatcaggtaaattatctaaacagtctcataacccctaaggaaatagaa
atagtcattaaaaacctcccaacaagagagagagagagacagagacagag
acagagagacaaagacagagacaccagagtcagatgggtttagtgcagaa
ttctaccaaaccttcaaaaaagagctaataccaatacttcacaaactgtt
ccacaaaatagaaacagaaggaacatgacctaattcattctatgaagcca
taattattctgctacctaaagcacacaaagacccaacaaagaaagtgaac
ttcagactattttcacttatgaatactgatgcaaaaatactcaataaagt
tcttgcaaaacaaatccaagagcacatcaaaaccatcattctccatgatc
aagtagtcatcagtgacagcacatgctggcaagatgtggagaaagaggaa
cactcatccattggtggtaggaccttagatgaatgccaaacattgagaga
gtctacctccagtagatacgcctcagttgagagagtttactaacccacag
tcaaactctgacctcagatgtactttatctaaagaactgcaggcaagtgg
gagaagaagactttaagaaggcagtcatgactgtcccactggaaggccct
gacttgggtggcctatgagagtgtagtgttacagatag
gaattcagtcattattcacatgcttgatatttgtgtatttgcttactaga
caaaatttatttgtaataccctcaagtcagtggaaggttttctgtcatct
atgaacatatgcagaaccccaaaattcttgtgcacttttgtgcctagggt
ctaacagggtggctttcatcttcttgctttagttctctgattataaaagt
gctttttacagcctgtttgattgccatgttttcctatgaggagtatttgt
gcttctgttgatggaaatgtccatgaaacagaagctgagtgtaaggttaa
atgttgtgtccggccagcagatcacagcctgggttctagcctggaaaggc
attttggaaacctggaagagaagagggactaggcggcgagagaaagaaat
gtagctaagacaggcattctgatcaaagctcaattttactgttctgacac
tcagttatgaaggaagtgggagggggcccgattcctgccaaataatctcg
ggatccagtagcagggtgaccacgtgtgtggctccaaacagcaaagcggc
aggttccagcagtgggtgtggcagaacgattgagcggaaagctccacccc
tgagcaagcaggtttcaggctgggggaggggagactacagttaaagaggc
caaagaagagtgtaagattaaagaggccaatgaatgtcactgtggtggtt
caagtaaaaatggcctctataggtttgactgcgtagtctttagagagtgg
caggcactgtttgaaagggttagaagatgttggccttgttggaggaaata
cactacagaggtgtggtgggtttttgaggttttaaaagccaatgctgggc
caggtgcactctgcctgccagccagatagagatgtggctcttcacctact
gcttcttagcaccctgcttgctggtgcctgctgcctgtgcttcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_9546574_9547510
seq2: B6Ng01-175E11.g_61_1006

seq1  GAATTCAGTCATTATTCACATGCTTGATATTTGTGTATTTGCTTACTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCATTATTCACATGCTTGATATTTGTGTATTTGCTTACTAGA  50

seq1  CAAAATTTATTTGTAATACCCTCAAGTCAGTGGAAGGTTTTCTGTCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTATTTGTAATACCCTCAAGTCAGTGGAAGGTTTTCTGTCATCT  100

seq1  ATGAACATATGCAGAACCCCAAAATTCTTGTGCACTTTTGTGCCTAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATATGCAGAACCCCAAAATTCTTGTGCACTTTTGTGCCTAGGGT  150

seq1  CTAACAGGGTGGCTTTCATCTTCTTGCTTTAGTTCTCTGATTATAAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGGGTGGCTTTCATCTTCTTGCTTTAGTTCTCTGATTATAAAAGT  200

seq1  GCTTTTTACAGCCTGTTTGATTGCCATGTTTTCCTATGAGGAGTATTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTACAGCCTGTTTGATTGCCATGTTTTCCTATGAGGAGTATTTGT  250

seq1  GCTTCTGTTGATGGAAATGTCCATGAAACAGAAGCTGAGTGTAAGGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTTGATGGAAATGTCCATGAAACAGAAGCTGAGTGTAAGGTTAA  300

seq1  ATGTTGTGTCCGGCCAGCAGATCACAGCCTGGGTTCTAGCCTGGAAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGTCCGGCCAGCAGATCACAGCCTGGGTTCTAGCCTGGAAAGGC  350

seq1  ATTTTGGAAACCTGGAAGAGAAGAGGGACTAGGCGGCGAGAGAAAGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAAACCTGGAAGAGAAGAGGGACTAGGCGGCGAGAGAAAGAAAT  400

seq1  GTAGCTAAGACAGGCATTCTGATCAAAGCTCAATTTTACTGTTCTGACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTAAGACAGGCATTCTGATCAAAGCTCAATTTTACTGTTCTGACAC  450

seq1  TCAGTTATGAAGGAAGTGGGAGGGGGCCCGATTCCTGCCAAATAATCTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTATGAAGGAAGTGGGAGGGGGCCCGATTCCTGCCAAATAATCTCG  500

seq1  GGATCCAGTAGCAGGGTGACCACGTGTGTGGCTCCAAACAGCAAAGCGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCAGTAGCAGGGTGACCACGTGTGTGGCTCCAAACAGCAAAGCGGC  550

seq1  AGGTTCCAGCAGTGGGTGTGGCAGAACGATTGAGCGGAAAGCTCCACCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCAGCAGTGGGTGTGGCAGAACGATTGAGCGGAAAGCTCCACCCC  600

seq1  TGAGCAAGCAGGTTTCAGGCTGGGGGAGGGGAGACTACAGTTAAAGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGCAGGTTTCAGGCTGGGGGAGGGGAGACTACAGTTAAAGAGGC  650

seq1  CAAAGAAGAGTGTAAGATTAAAGAGGCCAATGAATGTCACTGTGGTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGAGTGTAAGATTAAAGAGGCCAATGAATGTCACTGTGGTGGTT  700

seq1  CAAGTAAAAATGGCCTCTATAGG-TTGACTGCGTAGTCATTAGAGAGTGG  749
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  CAAGTAAAAATGGCCTCTATAGGTTTGACTGCGTAGTCTTTAGAGAGTGG  750

seq1  CAGGCACTGTTTGAAAGGGTTAGAAGATG-TGGCCTTGTTGGAGGAAATA  798
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGGCACTGTTTGAAAGGGTTAGAAGATGTTGGCCTTGTTGGAGGAAATA  800

seq1  CACTACAGAGGTGTGGTGGG-TTTTGAGGTTTTAAAAGCCAATGCTGGGC  847
      |||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  CACTACAGAGGTGTGGTGGGTTTTTGAGGTTTTAAAAGCCAATGCTGGG-  849

seq1  CCAGGTGCACTCTGCCTGCCAG-CAGATAGAGATGTGGCTC-TCAACTAC  895
      |||||||||||||||||||||| |||||||||||||||||| ||| ||||
seq2  CCAGGTGCACTCTGCCTGCCAGCCAGATAGAGATGTGGCTCTTCACCTAC  899

seq1  TGC-TCTTAGCACCCTGC-TGCT-GTGCCTGCTG-CTGTGC-TCCTG  937
      ||| |||||||||||||| |||| |||||||||| |||||| |||||
seq2  TGCTTCTTAGCACCCTGCTTGCTGGTGCCTGCTGCCTGTGCTTCCTG  946