BAC Information

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BAC

Clone NameB6Ng01-176E19
Chromosome13 (Build37)
Map Location 5,494,893 - 5,496,062
singlet/doubletsinglet
Overlap genenone
Upstream geneAkr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176E19.bB6Ng01-176E19.g
ACCGA003871GA003872
length4771,176
definitionB6Ng01-176E19.b B6Ng01-176E19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caggaatggaaatggagaggaacctgaggaaaagaaggtccagcgaaagg
cccaaagtgggatccagttcaaggggaggtcccaagacctgacactatca
ctgaggctatggagcactcaccaaaagggacctagcatgattgcactcca
gaagatccagaaagcagctgaaagtcaaatgcagatatttacacccaacc
aatggacagaagcagctgacccctattgttgaattagggaagctgaggag
aagggcgaccctgtaggagaaccagcagtttcaattaatctctcaaacac
tggaccaccaaacagcatacaccagctgagatgaggcccccaacacacat
acactagaggactgctgggcctgtgttcattcagagatgatgcacctaac
tctcaagagactggaggacccagggagtttagaggtcagatgggatgggg
atggggacatccacgtggggacggggg

gaattctcctcttgcagtccaatcggtgatcaaaattaaagaatgtatgg
cataattcagctgttttcttagttactgatgttacatctggcctctttct
gttccatgcttcattcattgttctgcctctttgctcatctatctttctta
cgatttcatcctatttggttgttgtgctatttcaactttaaaatgagttc
aggaaaagtaaaatatagtttatttatttgtgagagcagcgttttctttt
tttacacctttctgcatcctgggtggaagtggaattcactataaacagca
tctcaacttgaattttttatttcaaaaatgcaaacttggacactcaaacc
tgtattgaatctttcatcagtattgtcatgtactcatcattatattttaa
acattttcttcagttgcacacagttttacataaatctatgaatgtcacct
taaaatgcattgactttttaaaaattagatattatgatttacatttcaat
tgttaatttataagaacatgcaatttctatatgtaggttatccatagtca
ttactttttcctgcccagtgagtatgtaatgagtccattgtcactgtaat
ctgtatctctcttgtaagcgtgaacattttgctttacatcccacaatcat
tttgctttgcactgctgcaaattgctcctttttattttgcccagctctcc
attcaatcgtctgttctagtcaggtgaatctgacaaattgttacttgatt
tttttttttactagaattcccttccaaaaataattgcctgtctatttgct
ggtgttacattttgtcacagaacaattttctttatatataatgtagacaa
tgtgaatatgttctctataatgtctgagattctaagctttcttaagtggg
attctctaattcttattaatagttgtgcttgcatacattactgaatagca
cccacagcatgaagacagctctagtggtgaaggcaattttatgcaatcac
acattagagtattctaacaaatggtgtagaatgctgcacatctcttgcat
agccagtatcatatggattcatagcattttacctacatattatttggaat
gatgcagcaatgcctggaaccgatgatgtcttaacctagatctaggtaaa
ggtatctttcctattcaatctataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5494893_5496062
seq2: B6Ng01-176E19.g_63_1238 (reverse)

seq1  TCTATAGAT--GATAGG-AAGATA-CTTTA-CTAGATCTAGGTT-AGACA  44
      |||||||||   ||||| |||||| ||||| ||||||||||||| |||||
seq2  TCTATAGATTGAATAGGAAAGATACCTTTACCTAGATCTAGGTTAAGACA  50

seq1  TCTATTGGGTTCCAGGGCAATTGCTGCATTCATTC--AAT-ATATGTAGG  91
      ||   | |||||||||   ||||||||| ||||||  ||| |||||||||
seq2  TC--ATCGGTTCCAGG--CATTGCTGCA-TCATTCCAAATAATATGTAGG  95

seq1  TAAAATGCTATGGAATCCATATGAATACTGGCTATGCAAGAGATGTGCAG  141
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  TAAAATGCTAT-GAATCCATATG-ATACTGGCTATGCAAGAGATGTGCAG  143

seq1  CA-TCTACACCATTTGTAAG-ATACTCTAATGTGTGATTGCATAAAATTG  189
      || |||||||||||||| || |||||||||||||||||||||||||||||
seq2  CATTCTACACCATTTGTTAGAATACTCTAATGTGTGATTGCATAAAATTG  193

seq1  CCTTCACCACTAGAGCTGTCTTCATGCTGT-GGTGCTATTCAGTAATGTA  238
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTTCACCACTAGAGCTGTCTTCATGCTGTGGGTGCTATTCAGTAATGTA  243

seq1  TGCAAGCACAACTA-TAATAAGAATTAGAGAATCCCACTTAAGAAAGCTT  287
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGCAAGCACAACTATTAATAAGAATTAGAGAATCCCACTTAAGAAAGCTT  293

seq1  AGAATCTCAGACATTATAGAGAACATATTCACATTGTCTACATTATATAT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCAGACATTATAGAGAACATATTCACATTGTCTACATTATATAT  343

seq1  AAAGAAAATTGTTCTGTGACAAAATGTAACACCAGCAAATAGACAGGCAA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATTGTTCTGTGACAAAATGTAACACCAGCAAATAGACAGGCAA  393

seq1  TTATTTTTGGAAGGGAATTCTAGTAAAAAAAAAAATCAAGTAACAATTTG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTGGAAGGGAATTCTAGTAAAAAAAAAAATCAAGTAACAATTTG  443

seq1  TCAGATTCACCTGACTAGAACAGACGATTGAATGGAGAGCTGGGCAAAAT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCACCTGACTAGAACAGACGATTGAATGGAGAGCTGGGCAAAAT  493

seq1  AAAAAGGAGCAATTTGCAGCAGTGCAAAGCAAAATGATTGTGGGATGTAA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAGCAATTTGCAGCAGTGCAAAGCAAAATGATTGTGGGATGTAA  543

seq1  AGCAAAATGTTCACGCTTACAAGAGAGATACAGATTACAGTGACAATGGA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATGTTCACGCTTACAAGAGAGATACAGATTACAGTGACAATGGA  593

seq1  CTCATTACATACTCACTGGGCAGGAAAAAGTAATGACTATGGATAACCTA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTACATACTCACTGGGCAGGAAAAAGTAATGACTATGGATAACCTA  643

seq1  CATATAGAAATTGCATGTTCTTATAAATTAACAATTGAAATGTAAATCAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGAAATTGCATGTTCTTATAAATTAACAATTGAAATGTAAATCAT  693

seq1  AATATCTAATTTTTAAAAAGTCAATGCATTTTAAGGTGACATTCATAGAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAATTTTTAAAAAGTCAATGCATTTTAAGGTGACATTCATAGAT  743

seq1  TTATGTAAAACTGTGTGCAACTGAAGAAAATGTTTAAAATATAATGATGA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAAACTGTGTGCAACTGAAGAAAATGTTTAAAATATAATGATGA  793

seq1  GTACATGACAATACTGATGAAAGATTCAATACAGGTTTGAGTGTCCAAGT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGACAATACTGATGAAAGATTCAATACAGGTTTGAGTGTCCAAGT  843

seq1  TTGCATTTTTGAAATAAAAAATTCAAGTTGAGATGCTGTTTATAGTGAAT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTTTGAAATAAAAAATTCAAGTTGAGATGCTGTTTATAGTGAAT  893

seq1  TCCACTTCCACCCAGGATGCAGAAAGGTGTAAAAAAAGAAAACGCTGCTC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCCACCCAGGATGCAGAAAGGTGTAAAAAAAGAAAACGCTGCTC  943

seq1  TCACAAATAAATAAACTATATTTTACTTTTCCTGAACTCATTTTAAAGTT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATAAATAAACTATATTTTACTTTTCCTGAACTCATTTTAAAGTT  993

seq1  GAAATAGCACAACAACCAAATAGGATGAAATCGTAAGAAAGATAGATGAG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCACAACAACCAAATAGGATGAAATCGTAAGAAAGATAGATGAG  1043

seq1  CAAAGAGGCAGAACAATGAATGAAGCATGGAACAGAAAGAGGCCAGATGT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGGCAGAACAATGAATGAAGCATGGAACAGAAAGAGGCCAGATGT  1093

seq1  AACATCAGTAACTAAGAAAACAGCTGAATTATGCCATACATTCTTTAATT  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAGTAACTAAGAAAACAGCTGAATTATGCCATACATTCTTTAATT  1143

seq1  TTGATCACCGATTGGACTGCAAGAGGAGAATTC  1170
      |||||||||||||||||||||||||||||||||
seq2  TTGATCACCGATTGGACTGCAAGAGGAGAATTC  1176


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