MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-176I08
Chromosome	13 (Build37)
Map Location	56,793,017 - 56,922,656
singlet/doublet	doublet
Overlap gene	Smad5, EG627415, Trpc7
Upstream gene	B230219D22Rik, 2310047H23Rik, Pcbd2, Catsper3, Pitx1, H2afy, BC027057, Neurog1, Cxcl14, LOC100040926, AU042651, Il9, Fbxl21, Lect2, Tgfbi
Downstream gene	LOC100040995, Spock1
Link	Open Mouse BAC browser

Click to get alignment info.

name	B230219D22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78521 MGI:1925771
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047H23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69672 MGI:1916922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcbd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72562 MGI:1919812
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Catsper3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76856 MGI:1924106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pitx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18740 MGI:107374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	H2afy (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26914 MGI:1349392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC027057 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212937 MGI:2385852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neurog1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18014 MGI:107754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxcl14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57266 MGI:1888514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040926 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	AU042651 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328258 MGI:2145373
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16198 MGI:96563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxl21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213311 MGI:2442921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lect2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16841 MGI:1278342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tgfbi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21810 MGI:99959
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17129 MGI:1328787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627415 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627415 MGI:3648142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Trpc7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26946 MGI:1349470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Spock1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20745 MGI:105371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230219D22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341429 GeneID:78521 MGI:1925771
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230219D22 gene transcript_id : NM_181278.2

name	2310047H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52693934 GeneID:69672 MGI:1916922
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310047H23 gene transcript_id : NM_175150.3

name	Pcbd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52421793 GeneID:72562 MGI:1919812
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 transcript_id : NM_028281.1

name	Catsper3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802013 GeneID:76856 MGI:1924106
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cation channel, sperm associated 3 transcript_id : NM_029772.2

name	Pitx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130224 GeneID:18740 MGI:107374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 1 transcript_id : NM_011097.2

name	H2afy (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41152516 GeneID:26914 MGI:1349392
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : H2A histone family, member Y transcript_id : NM_012015.1

name	BC027057 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381297 GeneID:212937 MGI:2385852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC027057 transcript_id : NM_145976.3

name	Neurog1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271508 GeneID:18014 MGI:107754
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurogenin 1 transcript_id : NM_010896.2

name	Cxcl14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392097 GeneID:57266 MGI:1888514
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) ligand 14 transcript_id : NM_019568.2

name	LOC100040926 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149264244 GeneID:100040926
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040926 transcript_id : XM_001475501.1

name	AU042651 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384287 GeneID:328258 MGI:2145373
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU042651 transcript_id : NM_177809.3

name	Il9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680436 GeneID:16198 MGI:96563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 9 transcript_id : NM_008373.1

name	Fbxl21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803463 GeneID:213311 MGI:2442921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and leucine-rich repeat protein 21 transcript_id : NM_178674.4

name	Lect2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754529 GeneID:16841 MGI:1278342
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leukocyte cell-derived chemotaxin 2 transcript_id : NM_010702.1

name	Tgfbi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803530 GeneID:21810 MGI:99959
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming growth factor, beta induced transcript_id : NM_009369.2

name	Smad5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734445 GeneID:17129 MGI:1328787
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 5 (Drosophila) transcript_id : NM_008541.2

name	EG627415 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94395150 GeneID:627415 MGI:3648142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG627415 transcript_id : XM_892071.2

name	Trpc7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129964 GeneID:26946 MGI:1349470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily C, member 7 transcript_id : NM_012035.2

name	Spock1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50053937 GeneID:20745 MGI:105371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 transcript_id : NM_009262.2

name	B230219D22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044487 CCDS:CCDS26552.1 GeneID:78521 MGI:1925771
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] codon_start : 1 product : hypothetical protein LOC78521 protein_id : NP_851795.1

name	2310047H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52693935 CCDS:CCDS26553.1 GeneID:69672 MGI:1916922
definition	GO_function : GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] codon_start : 1 product : disulfide isomerase protein_id : NP_780359.2

name	Pcbd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52421794 CCDS:CCDS26554.1 GeneID:72562 MGI:1919812
definition	GO_component : GO:0005634 - nucleus [Evidence IPI] GO_function : GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0004505 - phenylalanine 4-monooxygenase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051291 - protein heterooligomerization [Evidence IPI]; GO:0051289 - protein homotetramerization [Evidence IPI]; GO:0006729 - tetrahydrobiopterin biosynthesis [Evidence IEA] codon_start : 1 note : dimerization cofactor of hepatocyte nuclear factor 1 (HNF1) from muscle product : pterin-4 alpha-carbinolamine dehydratase 2 protein_id : NP_082557.1

name	Catsper3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30350218 CCDS:CCDS26555.1 GeneID:76856 MGI:1924106
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA] codon_start : 1 product : cation channel, sperm associated 3 protein_id : NP_084048.1

name	Pitx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755070 CCDS:CCDS26556.1 GeneID:18740 MGI:107374
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : paired-like homeodomain transcription factor 1 protein_id : NP_035227.1

name	H2afy (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41152517 CCDS:CCDS26557.1 GeneID:26914 MGI:1349392
definition	GO_component : GO:0001740 - Barr body [Evidence ISS]; GO:0005813 - centrosome [Evidence TAS]; GO:0000793 - condensed chromosome [Evidence IDA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0007549 - dosage compensation [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence IEA] codon_start : 1 note : MACROH2A1.2 product : H2A histone family, member Y protein_id : NP_036145.1

name	BC027057 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122419 CCDS:CCDS26558.1 GeneID:212937 MGI:2385852
definition	codon_start : 1 product : hypothetical protein LOC212937 protein_id : NP_666088.1

name	Neurog1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754826 CCDS:CCDS26559.1 GeneID:18014 MGI:107754
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0007275 - development [Evidence IEA]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0031536 - positive regulation of exit from mitosis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : neurogenic differentiation 3 product : neurogenin 1 protein_id : NP_035026.1

name	Cxcl14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392098 GeneID:57266 MGI:1888514
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008009 - chemokine activity [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : musculus CXC chemokine MIP-2gamma; small inducible cytokine subfamily B (Cys-X-Cys), member 14 product : kidney-expressed chemokine CXC protein_id : NP_062514.2

name	LOC100040926 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149264245 GeneID:100040926
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475551.1

name	AU042651 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244360 CCDS:CCDS26561.1 GeneID:328258 MGI:2145373
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC328258 protein_id : NP_808477.1

name	Il9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680437 CCDS:CCDS26562.1 GeneID:16198 MGI:96563
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IEA]; GO:0005140 - interleukin-9 receptor binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0045407 - positive regulation of interleukin-5 biosynthesis [Evidence IMP] codon_start : 1 product : interleukin 9 protein_id : NP_032399.1

name	Fbxl21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776547 CCDS:CCDS26563.1 GeneID:213311 MGI:2442921
definition	GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box and leucine-rich repeat protein 21 protein_id : NP_848789.2

name	Lect2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754530 CCDS:CCDS26564.1 GeneID:16841 MGI:1278342
definition	GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : chondromodulin-II product : leukocyte cell-derived chemotaxin 2 protein_id : NP_034832.1

name	Tgfbi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678321 GeneID:21810 MGI:99959
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IDA] codon_start : 1 function : cell adhesion inhibitor note : transforming growth factor, beta induced, 68 kDa product : transforming growth factor, beta induced protein_id : NP_033395.1

name	Smad5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678774 CCDS:CCDS26565.1 GeneID:17129 MGI:1328787
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence ISS] [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030509 - BMP signaling pathway [Evidence TAS] [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence ISS]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] [Evidence IDA] codon_start : 1 note : Smad 5 product : MAD homolog 5 protein_id : NP_032567.1

name	EG627415 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82950827 GeneID:627415 MGI:3648142
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897164.1

name	Trpc7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755889 CCDS:CCDS26566.1 GeneID:26946 MGI:1349470
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : transient receptor protein 8; mouse transient receptor potential protein homologue TRP7 product : transient receptor potential cation channel, subfamily C, member 7 protein_id : NP_036165.1

name	Spock1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50053938 GeneID:20745 MGI:105371
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : sparc/osteonectin, cwcv and kazal-like domains proteoglycan product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 protein_id : NP_033288.2

name	LOC100040995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040995
definition	number : 2 pseudo : _no_value

name	LOC100040995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040995
definition	number : 1 pseudo : _no_value

clone name	MSMg01-455A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356G22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-390A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-176I08.b	B6Ng01-176I08.g
ACC	GA004035	GA004036
length	1,086	1,087
definition	B6Ng01-176I08.b	B6Ng01-176I08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(56,793,017 - 56,794,110)	(56,921,563 - 56,922,656)
sequence	gaattctaactaccaaaaattctggggataaaagaacaggaaggccattc tagggactgttgttattctagaagcctggtagcaatgtcccgaccagaga tcagaaggacgtcgaggctaaagaataggatctcattcagcaatcataag caagtaagataagcattccacgatttgtaagaaacactcattttcctgag gctctgaagctagaagcagacccctagatggcttttgttcgacttcgggg ccatcagagccaggaccacattggtctactgaattcacacagattcttga ttctgacagtgacctggtaggggctccttctactccatcacgacacagca gcgtggagacatcgtgtgaccttcttccttgctttttcaaaaaatccaag ctgcagtgtttagcctatagtgaatgcaacaggactctctgaatctgggt ctgtggaagccactgctcagatcgcagccaggctgcaccctgcaggtggc tcctctttgctgtggaaaccttaccccacctccacgtgagtcagggagcc cgtgttgactttgaataacttccctgacttgaatcatcagtccaaatcgc ctctaatgtggcatgatagtaacacccacgtgttgtcaacagcacagcca cacaagcatgtgccactgagcagagagaataaataggtttcactattccc ctatttccttccagataaacatgctggaacactgactccgttcaattagg gccctttaaatcttgcccagggccctcgccagactgttagaataaagttt tatggcctgcttgctctgtatgactttgccgccaccaaatgacatggatt ctgattacaaattgcaattatgtgtgccaacacatttatttatttattct tttgcttagtaacctgttattttcccagcttggttctcagagcgttgtga ctccctaaagtttggcatgaaaatccttgttgtccgagtacacagttgag gatggttctgtgtttcatgagccagagggtagtagcagtgtgtgcagtgt aggctcagctgatgtgagtcttagctttgtttctgc	gaattcattctcttcccgatgtcccacctctatttcctgcctaagccaca ggccagaggccttttaatagacaggtgaggcatccacacaatacacaaga tgctctctacagtaatgtgttatttgtttaaattagtatgctaaatggtt gtggattcctatctgtgctgatgttttgtgcttccaaggtttcccacaat tgcctaggaaatggttccccatgccttccgtttattactggaagtggcta aaatagtgggaaaatgctactcatttcttttttctaacactgaaaactgc aaatcagttgacaggagaaaaattgaaaacttgccaaagctatcatcagg gatataataaataaacaaaacgctaataagctgtaaactttatactgcaa agatctggatgtaatgggggatatttctagtgaaataaaagttttaaaag aactgaattactgtgcagtaatgacagttggtcaattaattaaattagct taacagtattcacccagattttgctttcctggcaaatatttaatatttgt ataattattatatttacaagtataaagtcacaaaaagtaatcaggatcaa agtgtttttgccatcaaatagcaaaatcatgaacagatatgtaaaaaggc tatgtaacacatggcctgtactgatatgtagcccaagaaagttacaagag ataaaccaccagagagcatcattgctgtccaaactgggaacacctggata aatgggccctacgctgtaccacaaagtgggcaagcagaaaccgtgagaat gtgttgacctggggcagtcaggacagcatgccatgcttcccagggacatg tgatcagctggcaaacctgtggccaaagaattgtttactcacgtcatcga cactaaagttgaatagggaagacaccgaagcctggtatgagttagtctgt ggccttttgcagttcagacctaccgcagcctctctcagacagcccctggt ttaacacatcaaacactttacaacactagctctttcaaacatcacatctg agtttattggagtaaaaatttaaagtattacaataca
quality values	Open. Hide. 58 33 28 22 58 54 54 42 62 62 53 54 62 33 30 62 62 62 47 47 62 54 47 62 62 62 62 32 26 62 62 62 54 62 62 62 59 59 62 62 46 62 62 59 59 59 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 59 62 59 62 62 62 59 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 59 62 62 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 58 58 58 52 54 58 54 58 58 49 58 58 58 58 58 58 54 54 58 58 58 58 58 58 45 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 49 51 58 58 58 54 47 58 58 58 52 54 58 58 58 58 52 58 58 54 58 58 58 58 58 58 41 58 58 58 54 51 58 58 58 51 58 58 58 58 51 50 58 58 58 54 58 58 53 51 58 51 58 58 58 58 58 58 58 51 50 58 58 58 58 58 50 53 53 53 58 47 54 53 58 53 46 58 49 47 58 49 46 58 53 58 52 49 58 49 58 40 58 47 46 46 49 58 39 39 53 53 53 58 50 53 50 51 58 54 50 53 58 50 54 50 49 54 53 52 37 58 47 33 49 50 52 53 53 50 51 47 50 53 41 52 50 58 52 49 39 51 54 53 53 51 52 37 50 51 51 54 35 52 51 37 54 28 53 45 54 32 32 49 54 51 52 53 54 51 31 54 37 49 34 49 53 45 45 52 49 36 36 46 39 42 52 54 40 31 35 45 52 35 33 32 40 51 25 30 54 51 44 32 53 53 37 45 54 47 42 51 42 32 39 52 53 39 37 52 53 51 39 38 52 40 40 45 33 53 39 29 49 38 22 53 53 46 49 32 39 53 32 39 45 45 40 53 24 52 32 34 41 53 46 29 53 52 52 36 34 32 39 33 32 36 13 31 51 14 31 35 35 37 38 31 31 51 34 33 32 51 51 30 31 31 31 38 12 45 31 43 33 38 34 45 34 31 31 31 45 25 31 39 35 41 24 31 47 46 24 23 37 32 31 42 24 31 42 28 48 42 32 42 31 28 32 36 42 29 10 9 44 31 30 31 37 11 33 29 37 32 46 31 29 36 43 28 30 21 30 31 38 31 31 32 37 35 31 31 37 22 17 27 23 36 26 22 48 33 15 20 48 35 25 22 48 36 26 29 36 37 31 48 48 34 30 24 29 30 19 16 31 31 28 31 38 22 32 14 24 31 32 48 48 24 25 41 23 31 27 32 23 33 23 13 5 6 23 31 32 33 16 37 14 35 31 18 20 38 27 34 21 21 33 25 47 33 25 28 43 25 14 19 43 15 31 33 21 32 32 24 28 48 48 28 25 20 18 22 20 28 22 17 32 19 17 29 6 16 7 17 31 31 14 32 25 10 13 15 24 24 8 9 22 13 20 19 11 15 14 6 11 6 21 10 47 26 20 20 16 12 3 4 16 9 20 9 16 11 30 14 6 6 11 9 9 13 9 14 7 9 14 6 17 3 11 19 16 13 12 15 3 7 9 19 14 18 22 21 13 28 18 27 15 5 6 9 6 7 5 27 5 4 4 6 5 22 16 27 8 17 8 30 9 15 10 20 23	Open. Hide. 62 49 31 44 62 44 44 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 59 59 62 59 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 54 58 58 58 54 58 58 58 58 49 43 58 58 54 54 58 58 58 58 58 58 58 58 54 58 58 54 54 54 58 54 54 58 58 52 53 58 58 50 51 46 49 58 58 58 58 53 58 58 58 58 58 58 58 58 50 53 58 58 53 53 49 58 47 51 58 49 58 41 49 58 58 53 52 53 53 58 49 58 58 47 54 58 58 53 58 58 51 54 58 52 58 58 54 52 53 50 58 58 51 54 58 50 54 52 58 58 58 58 53 53 58 51 49 58 53 51 58 37 47 53 53 51 58 51 53 58 53 58 58 58 49 51 53 53 32 54 53 32 58 51 53 53 50 53 51 58 49 29 50 54 50 54 58 44 58 53 45 53 53 42 50 39 51 45 37 54 54 54 53 51 49 25 50 52 39 54 53 51 49 42 38 51 40 49 52 54 47 54 39 54 42 42 41 53 53 53 45 42 53 53 42 53 42 47 54 52 39 39 36 54 54 32 24 20 53 34 53 23 32 47 54 32 34 24 37 54 37 53 53 32 47 52 33 42 51 25 33 24 42 32 37 39 31 52 54 52 40 45 53 37 52 31 18 36 40 31 31 32 22 12 40 36 32 34 32 52 31 53 52 32 34 31 51 29 31 36 51 32 32 52 53 34 40 35 28 53 34 41 31 31 31 43 31 38 31 46 41 32 32 31 47 31 31 29 31 23 31 30 25 48 51 31 32 51 31 30 43 33 26 46 31 28 42 35 31 22 30 29 31 21 31 34 32 48 46 43 32 36 32 28 36 38 29 42 34 27 32 25 30 26 36 32 11 14 21 24 31 38 38 37 32 46 31 31 16 47 46 25 23 23 31 35 32 32 30 27 35 24 31 32 36 31 41 28 29 37 26 9 26 30 36 28 43 36 19 17 20 46 32 22 43 30 25 22 24 25 48 32 31 25 34 42 26 35 25 28 36 31 34 36 18 30 21 12 33 31 36 48 37 33 21 30 25 32 31 32 32 27 48 27 24 21 11 9 6 10 13 33 26 33 33 16 25 21 23 20 26 6 17 18 27 30 10 23 18 4 4 9 31 27 32 15 19 27 19 17 30 48 48 26 32 32 31 24 32 26 13 13 8 16 4 15 32 34 23 21 20 18 8 18 7 5 11 16 15 24 28 24 20 13 27 19 21 6 15 34 34 24 6 18 19 3 34 10 23 9 18 6 7 15 20 17 22 31 16 15 17 8 12 29 23 20 18 13 12 13 10 23 8 6 13 9 18 19 20 40 21 11 19 21 8 8 6 34 13 7 6 11 23 8 11 13 8 3 3 20 8 17 10 4 4 6 4 1 4 15 27 27 27 16 9 28 10 9 23 10 17 6 6 13 17 4 11 8 15 10 4 6 22

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_56793017_56794110
seq2: B6Ng01-176I08.b_44_1129

seq1  GAATTCTAACTACCAAAAATTCTGGGGATAAAAGAACAGGAAGGCCATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTACCAAAAATTCTGGGGATAAAAGAACAGGAAGGCCATTC  50

seq1  TAGGGACTGTTGTTATTCTAGAAGCCTGGTAGCAATGTCCCGACCAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACTGTTGTTATTCTAGAAGCCTGGTAGCAATGTCCCGACCAGAGA  100

seq1  TCAGAAGGACGTCGAGGCTAAAGAATAGGATCTCATTCAGCAATCATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGACGTCGAGGCTAAAGAATAGGATCTCATTCAGCAATCATAAG  150

seq1  CAAGTAAGATAAGCATTCCACGATTTGTAAGAAACACTCATTTTCCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAGATAAGCATTCCACGATTTGTAAGAAACACTCATTTTCCTGAG  200

seq1  GCTCTGAAGCTAGAAGCAGACCCCTAGATGGCTTTTGTTCGACTTCGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAAGCTAGAAGCAGACCCCTAGATGGCTTTTGTTCGACTTCGGGG  250

seq1  CCATCAGAGCCAGGACCACATTGGTCTACTGAATTCACACAGATTCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGAGCCAGGACCACATTGGTCTACTGAATTCACACAGATTCTTGA  300

seq1  TTCTGACAGTGACCTGGTAGGGGCTCCTTCTACTCCATCACGACACAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACAGTGACCTGGTAGGGGCTCCTTCTACTCCATCACGACACAGCA  350

seq1  GCGTGGAGACATCGTGTGACCTTCTTCCTTGCTTTTTCAAAAAATCCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGAGACATCGTGTGACCTTCTTCCTTGCTTTTTCAAAAAATCCAAG  400

seq1  CTGCAGTGTTTAGCCTATAGTGAATGCAACAGGACTCTCTGAATCTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTGTTTAGCCTATAGTGAATGCAACAGGACTCTCTGAATCTGGGT  450

seq1  CTGTGGAAGCCACTGCTCAGATCGCAGCCAGGCTGCACCCTGCAGGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAAGCCACTGCTCAGATCGCAGCCAGGCTGCACCCTGCAGGTGGC  500

seq1  TCCTCTTTGCTGTGGAAACCTTACCCCACCTCCACGTGAGTCAGGGAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTGCTGTGGAAACCTTACCCCACCTCCACGTGAGTCAGGGAGCC  550

seq1  CGTGTTGACTTTGAATAACTTCCCTGACTTGAATCATCAGTCCAAATCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTGACTTTGAATAACTTCCCTGACTTGAATCATCAGTCCAAATCGC  600

seq1  CTCTAATGTGGCATGATAGTAACACCCACGTGTTGTCAACAGCACAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATGTGGCATGATAGTAACACCCACGTGTTGTCAACAGCACAGCCA  650

seq1  CACAAGCATGTGCCACTGAGCAGAGAGAATAAATAGGTTTCACTATTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCATGTGCCACTGAGCAGAGAGAATAAATAGGTTTCACTATTCCC  700

seq1  CTATTTCCTTCCAGATAAACATGCTGGAACACTGACTCCGTTCAATTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCTTCCAGATAAACATGCTGGAACACTGACTCCGTTCAATTAGG  750

seq1  GCCCTTTAAATCTTGCCCAGGGCCCTCGCCAGACTGTTAGAATAAAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTAAATCTTGCCCAGGGCCCTCGCCAGACTGTTAGAATAAAGTTT  800

seq1  TATGGCCTGCTTGCTCTGTATGACTTTGCCGCCACCAAATGACATGGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCTGCTTGCTCTGTATGACTTTGCCGCCACCAAATGACATGGATT  850

seq1  CTGATTACAAATTGCAATTATGTGTGCCAACACATTTATTTATTTATTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTACAAATTGCAATTATGTGTGCCAACACATTTATTTATTTATTCT  900

seq1  TTTGCTTAGTAACCTGTTATTTTCCCAGCTTGGTTCTCAGAGCGTTGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTAGTAACCTGTTATTTTCCCAGCTTGGTTCTCAGAGCGTTGTGA  950

seq1  CTCCCTAAAGTTTGGCATGAAAATCCTTGTTGTCCGAGTACACAGTTGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAAAGTTTGGCATGAAAATCCTTGTTGTCCGAGTACACAGTTGAG  1000

seq1  GATGGTTCTGTGTTTCATGGAGCCAAGAGGGTAGGTAGGCAGTGTGGTGC  1050
      |||||||||||||||||| ||||| |||||||| ||| ||||||| ||||
seq2  GATGGTTCTGTGTTTCAT-GAGCC-AGAGGGTA-GTA-GCAGTGT-GTGC  1045

seq1  AGTGGTTAGGCTCAGCTGGATGTGAGTTCTAGCTTTGTTTCTGC  1094
      ||||  ||||||||||| |||||||||  |||||||||||||||
seq2  AGTG--TAGGCTCAGCT-GATGTGAGTCTTAGCTTTGTTTCTGC  1086

seq1: chr13_56921563_56922656
seq2: B6Ng01-176I08.g_62_1148 (reverse)

seq1  TGTATTGTAAATACTTTAAATTTTTTACTC--ATAAACTCAGAATGTGAA  48
      |||||||| ||||||||||| |||||||||  |||||||||| ||||| |
seq2  TGTATTGT-AATACTTTAAA-TTTTTACTCCAATAAACTCAG-ATGTG-A  46

seq1  TGTTTGAAAGAGCCTAGTGTTGTAAAGTGTTTGATGTGTTAAACCAGGGG  98
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  TGTTTGAAAGAG-CTAGTGTTGTAAAGTGTTTGATGTGTTAAACCA-GGG  94

seq1  GCTGTCTGAGAGAGGCCTGCGGTAGGTTCTGAACTGCAAAAGGCCACAGA  148
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  GCTGTCTGAGAGAGG-CTGCGGTAGG-TCTGAACTGCAAAAGGCCACAGA  142

seq1  CCTAACTCATACCAGGCTTCGGTGTCTTCCCTATTCAACTTTAGTGTCGA  198
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CTAACTCATACCAGGCTTCGGTGTCTTCCCTATTCAACTTTAGTGTCGA  191

seq1  TGACGTGAGTAAACAATTCTTTGGCCACAGGTTTGCCAGCTGATCACATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTGAGTAAACAATTCTTTGGCCACAGGTTTGCCAGCTGATCACATG  241

seq1  TCCCTGGGAAGCATGGCATGCTGTCCTGACTGCCCCAGGTCAACACATTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGAAGCATGGCATGCTGTCCTGACTGCCCCAGGTCAACACATTC  291

seq1  TCACGGTTTCTGCTTGCCCACTTTGTGGTACAGCGTAGGGCCCATTTATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGTTTCTGCTTGCCCACTTTGTGGTACAGCGTAGGGCCCATTTATC  341

seq1  CAGGTGTTCCCAGTTTGGACAGCAATGATGCTCTCTGGTGGTTTATCTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTCCCAGTTTGGACAGCAATGATGCTCTCTGGTGGTTTATCTCT  391

seq1  TGTAACTTTCTTGGGCTACATATCAGTACAGGCCATGTGTTACATAGCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTTTCTTGGGCTACATATCAGTACAGGCCATGTGTTACATAGCCT  441

seq1  TTTTACATATCTGTTCATGATTTTGCTATTTGATGGCAAAAACACTTTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATATCTGTTCATGATTTTGCTATTTGATGGCAAAAACACTTTGA  491

seq1  TCCTGATTACTTTTTGTGACTTTATACTTGTAAATATAATAATTATACAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATTACTTTTTGTGACTTTATACTTGTAAATATAATAATTATACAA  541

seq1  ATATTAAATATTTGCCAGGAAAGCAAAATCTGGGTGAATACTGTTAAGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATATTTGCCAGGAAAGCAAAATCTGGGTGAATACTGTTAAGCT  591

seq1  AATTTAATTAATTGACCAACTGTCATTACTGCACAGTAATTCAGTTCTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATTAATTGACCAACTGTCATTACTGCACAGTAATTCAGTTCTTT  641

seq1  TAAAACTTTTATTTCACTAGAAATATCCCCCATTACATCCAGATCTTTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTTTATTTCACTAGAAATATCCCCCATTACATCCAGATCTTTGC  691

seq1  AGTATAAAGTTTACAGCTTATTAGCGTTTTGTTTATTTATTATATCCCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAGTTTACAGCTTATTAGCGTTTTGTTTATTTATTATATCCCTG  741

seq1  ATGATAGCTTTGGCAAGTTTTCAATTTTTCTCCTGTCAACTGATTTGCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGCTTTGGCAAGTTTTCAATTTTTCTCCTGTCAACTGATTTGCAG  791

seq1  TTTTCAGTGTTAGAAAAAAGAAATGAGTAGCATTTTCCCACTATTTTAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGTGTTAGAAAAAAGAAATGAGTAGCATTTTCCCACTATTTTAGC  841

seq1  CACTTCCAGTAATAAACGGAAGGCATGGGGAACCATTTCCTAGGCAATTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCAGTAATAAACGGAAGGCATGGGGAACCATTTCCTAGGCAATTG  891

seq1  TGGGAAACCTTGGAAGCACAAAACATCAGCACAGATAGGAATCCACAACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAACCTTGGAAGCACAAAACATCAGCACAGATAGGAATCCACAACC  941

seq1  ATTTAGCATACTAATTTAAACAAATAACACATTACTGTAGAGAGCATCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCATACTAATTTAAACAAATAACACATTACTGTAGAGAGCATCTT  991

seq1  GTGTATTGTGTGGATGCCTCACCTGTCTATTAAAAGGCCTCTGGCCTGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTGTGTGGATGCCTCACCTGTCTATTAAAAGGCCTCTGGCCTGTG  1041

seq1  GCTTAGGCAGGAAATAGAGGTGGGACATCGGGAAGAGAATGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGCAGGAAATAGAGGTGGGACATCGGGAAGAGAATGAATTC  1087

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information