BAC Information

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BAC

Clone NameB6Ng01-177N20
Chromosome13 (Build37)
Map Location 28,181,912 - 28,182,193
singlet/doubletsinglet
Overlap genenone
Upstream genePrl3d1, Prl3d2, Prl3d3, Prl3c1, Prl3b1, Prl3a1, Prl6a1, Prl8a2, Prl2b1, Prl8a6, Prl8a8, Prl8a9, Prl8a1, Prl7b1, Prl7a1, Prl7a2, RP23-135A24.2-001, Prl7d1, Prl7c1, Prl2a1, OTTMUSG00000000651, LOC666321, LOC195243, LOC100041036, Prl4a1
Downstream genePrl5a1, LOC100042388, LOC100042393, LOC100042399, Ppia-ps13_297.1, LOC626683, 2610307P16Rik, Sox4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177N20.b
ACCGA005019
length926
definitionB6Ng01-177N20.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtattgcttttgtactgatcgattgcctgttgcccctgacgac
ccgtctgttttgagcacttttgaggcaagtgatgtcaggatgcaaaatct
tttatatttcatacatttgcatcagactgaggatgcgaccggacttgagt
tgagcaaccgtgccttggacttgtgacttatatgatgttgggaaaatgac
gtaaagcttctgagctttgaaaagatgggtggaattaaaagggtgatgag
atgagaaccttagaaaagcaataaagaaaatatctaataaaaataaatta
atacataaataaatagaaacaaaaacatttttgtagcaaaaaaaaaccca
gaaaacaaaaaacagaacttaggaaattaatctgaacaggtgagagggtg
caccagagaaccggacagcttctgggacaggcggaagcacagagccgctg
aggcagcacccttggcgggccacagacagccggccaccgtccggactaga
ggacaggtgtccgcctggctcgggaggtggcctcagcctcagcagcagcg
gtcaccatcttggttccgggactcagcagaacttaggaaattagtctgaa
caggttagagggtgcgccagagaactggacagctatgcccctcaaaagag
gaattaatacagaaaatgtggtacatctaaacaatggagtactactcagc
tattaaaaagaatgaatttatgaaattcctagccaaatggatggacctgg
agggcatcatcctgagtgaggtaacacattcacaaaggaattcacacaat
atgtactcactgataagttggataaatagcccaaaacctaggattaccca
agatattagatacaattttccttaacacatgaaaactcaatgaaaattga
agaactgaatgtgtggacactttgcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_28181912_28182193
seq2: B6Ng01-177N20.b_674_964 (reverse)

seq1  GCAAAGTGTCCACACTTT--GGTCTTCGTTCTTC-TTCAG-TTTCATGTG  46
      ||||||||||||||| ||  | |||||  | ||| || || |||||||||
seq2  GCAAAGTGTCCACACATTCAGTTCTTCAATTTTCATTGAGTTTTCATGTG  50

seq1  TT-TTGCATAGTGTACCTTATATCT--CGCTATACTAAGTTTCTGGGCTA  93
      ||   | | | |||| || ||||||   |  || ||| |||| |||||||
seq2  TTAAGGAAAATTGTATCTAATATCTTGGGTAATCCTAGGTTT-TGGGCTA  99

seq1  -ATATCC-ACTTATCAGTGAGTACAT-TCATTTTAGTTCTTTTGTGATTG  140
        ||||| |||||||||||||||||| |  | | | ||| ||||||| ||
seq2  TTTATCCAACTTATCAGTGAGTACATATTGTGTGAATTCCTTTGTGAATG  149

seq1  GGTTACCTCACTCAGGATGATGCCCTCCAGGTCCAACCATTTGCCTAGGA  190
       |||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  TGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGA  199

seq1  ATTTCATAAATTTATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAA  240
      |||||||||||| ||||||||||||||||||||||||||||||||| || 
seq2  ATTTCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTTTAG  249

seq1  ATGTACCACATTTTTTGTATCCATTCCTCTGTTGAGGGGCAT  282
      |||||||||||||| |||||  |||||||| |||||||||||
seq2  ATGTACCACATTTTCTGTATTAATTCCTCTTTTGAGGGGCAT  291