BAC Information

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BAC

Clone NameB6Ng01-179K09
Chromosome13 (Build37)
Map Location 119,376,213 - 119,377,071
singlet/doubletsinglet
Overlap genenone
Upstream geneHcn1, LOC100041695, LOC674926, Mrps30, LOC668309
Downstream geneLOC100041278, Fgf10, LOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179K09.bB6Ng01-179K09.g
ACCGA006309GA006310
length1,1471,056
definitionB6Ng01-179K09.b B6Ng01-179K09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgcataagccttttccttaggtctttaatcatattggagccct
tagcttatgggatagtattacccatagtcagcgccggactcactagctgc
ttgatcttcccaggaacactctcacagaaacatccagtggtgtggtatgt
tttaccgataatttgcggatttaattcaatctttggtctgcgttcatcat
cacagctgcagcatcagtcttgaacaccctgatcttcactgctatttctc
tgatttcacctctgcctcttaaattttaatgatcgttttaggggctacaa
tccacttggttctccttttcttcttctcattcttctgatcacatataact
tttgtctttacttggcttgtcttctattgtctatcagtaccttctcttcc
tcacctagcatttcactttggaatgtcttgccctgttattctcgtgttac
aaatgtttattatgggctaagtcaaaccccttattactctgtgcctcagt
ataccataatttggctgtaagaaaagaaaagaacaagaaaatagagtcat
tctgctgacaaaatttcaaacaacattaaccttcagtgaaattctggatt
gcctgataattccattttgtatttttccccagagtcaattttcttctgtt
tactctttactcaaatctgtaaagaataacgacaacacattttattcact
gttcatgtgttccccccagacctgactccttatggatgacttcacttctt
attccacagattaagtctggaagaaacgagaaaggtctcttctatgtaca
agtatatacatttactaaagcaattgggacctgctttccagttagaactg
agagtagtatgacttccagaaaatcttctaaaatgttaacactggagacc
ctctgctctgcaccagttcttattgaaaattagcaactgtgtttcaagct
cctgtctagcctccggtttgctgaaagtctactttaaaagttaacttcag
agatcaaggccagactggtctacagagaaaggcttgtcttgaagaaacaa
aaacgattggtgcctaaaggtttctttgataaacccctgctccagcaagg
ggcttccagttggattctgctggagctcagctggcttgaaggtaggg
gaattctcacctgaggaataccgagtggctgagaagcacctggaaaaatg
ttcagcatcctaaatcatcagggaaattcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggggaggatttggagaaagaggaacactcctccaatgctgatg
ggattgcaagcttgtacaaccactctggaagtcagtctggaggttcctca
gagaattggacataatactaccggaagatccaccaatacctctcctgggc
atatacccagaagtagtttcaactgataataagaacacatgctccactat
gttcagagcagccttatttatagtaaccagaagctggaaagaacccagct
gcacctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgagtttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttagaatatccaagatacaagatacaattgcaaaacacgtgaatctcaag
aagaatgaagaccgtgtggacacttttgccccttcttagaattggggaac
aaaacactcatggaaggagttatagagacaaagtttggagccgagacgaa
aggatgggaccatctagagactgccataccaggggatccatcccataatc
aggctccaaatgatgacaccattgcatacaccagcaagattttgctgaaa
gggaccctgatatagctggtcttttggtgagactatgcccgggcctggca
acacagaagtggatgctcacagtcgctattggaagaatcacgggccttcc
aatggaggatctagagaaagtacccaaggagctaagggaatcttcaaccc
ttttaatgtggtaaccaacatttatgaatctatcccattacccccgttga
agctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119376213_119377071
seq2: B6Ng01-179K09.b_329_1188 (reverse)

seq1  CCCTACCTTCATGGCAGCTGAGCTTCAACAGGATCCAACTGG-AGCCCCT  49
      ||||||||||| | |||||||||| || ||| |||||||||| |||||||
seq2  CCCTACCTTCAAGCCAGCTGAGCTCCAGCAGAATCCAACTGGAAGCCCCT  50

seq1  TGCTGAGGCAGGGGTTTATCAAAGAAACCTTTAGCCACCAATCG-TTTTG  98
      |||||  ||||||||||||||||||||||||||| ||||||||| |||||
seq2  TGCTGGAGCAGGGGTTTATCAAAGAAACCTTTAGGCACCAATCGTTTTTG  100

seq1  TTTCTTCAAGAC-AGGCTTTCTCTGTAGACCAGTCTGGCCTTGATCTCTG  147
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  TTTCTTCAAGACAAGCCTTTCTCTGTAGACCAGTCTGGCCTTGATCTCTG  150

seq1  AAGTTAACTTTTTAAAGTAGACTTTCAGCAAACCGGAGGCTAGACAGGAG  197
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAC-TTTTAAAGTAGACTTTCAGCAAACCGGAGGCTAGACAGGAG  199

seq1  CTTTGAAACACAGTTGCTAATTTTCAATAAGAACTGGTGCAGAGCAGAGG  247
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTGAAACACAGTTGCTAATTTTCAATAAGAACTGGTGCAGAGCAGAGG  248

seq1  GTCTCCAGTGTTAACATTTTAGAAGATTTTCTGGAAGTCATACTACTCTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAGTGTTAACATTTTAGAAGATTTTCTGGAAGTCATACTACTCTC  298

seq1  AGTTCTAACTGGAAAGCAGGTCCCAATTGCTTTAGTAAATGTATATACTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAACTGGAAAGCAGGTCCCAATTGCTTTAGTAAATGTATATACTT  348

seq1  GTACATAGAAGAGACCTTTCTCGTTTCTTCCAGACTTAATCTGTGGAATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATAGAAGAGACCTTTCTCGTTTCTTCCAGACTTAATCTGTGGAATA  398

seq1  AGAAGTGAAGTCATCCATAAGGAGTCAGGTCTGGGGGGAACACATGAACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAAGTCATCCATAAGGAGTCAGGTCTGGGGGGAACACATGAACA  448

seq1  GTGAATAAAATGTGTTGTCGTTATTCTTTACAGATTTGAGTAAAGAGTAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAAAATGTGTTGTCGTTATTCTTTACAGATTTGAGTAAAGAGTAA  498

seq1  ACAGAAGAAAATTGACTCTGGGGAAAAATACAAAATGGAATTATCAGGCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGAAAATTGACTCTGGGGAAAAATACAAAATGGAATTATCAGGCA  548

seq1  ATCCAGAATTTCACTGAAGGTTAATGTTGTTTGAAATTTTGTCAGCAGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAATTTCACTGAAGGTTAATGTTGTTTGAAATTTTGTCAGCAGAA  598

seq1  TGACTCTATTTTCTTGTTCTTTTCTTTTCTTACAGCCAAATTATGGTATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTATTTTCTTGTTCTTTTCTTTTCTTACAGCCAAATTATGGTATA  648

seq1  CTGAGGCACAGAGTAATAAGGGGTTTGACTTAGCCCATAATAAACATTTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCACAGAGTAATAAGGGGTTTGACTTAGCCCATAATAAACATTTG  698

seq1  TAACACGAGAATAACAGGGCAAGACATTCCAAAGTGAAATGCTAGGTGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACGAGAATAACAGGGCAAGACATTCCAAAGTGAAATGCTAGGTGAG  748

seq1  GAAGAGAAGGTACTGATAGACAATAGAAGACAAGCCAAGTAAAGACAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAGGTACTGATAGACAATAGAAGACAAGCCAAGTAAAGACAAAA  798

seq1  GTTATATGTGATCAGAAGAATGAGAAGAAGAAAAGGAGAACCAAGTGGAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATGTGATCAGAAGAATGAGAAGAAGAAAAGGAGAACCAAGTGGAT  848

seq1  TGTAGCCCCTAA  859
      ||||||||||||
seq2  TGTAGCCCCTAA  860