BAC Information

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BAC

Clone NameB6Ng01-181G10
Chromosome13 (Build37)
Map Location 100,055,274 - 100,249,136
singlet/doubletdoublet
Overlap genePtcd2, Mrps27, Mtap1b
Upstream geneEG667718, Btf3, Foxd1, LOC100039827, LOC100039665, LOC100039854, LOC218501, Tmem174, Tmem171, LOC669675, Fcho2, Tnpo1, EG432798, LOC100039771, 1700024P04Rik, LOC100039967, LOC100039797, Zfp366
Downstream geneCartpt, Mccc2, Bdp1, Serf1, Smn1, Naip2, Birc1-rs1, Naip5, Birc1c-ps1, Birc1f, EG667838, Naip1, Gtf2h2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181G10.bB6Ng01-181G10.g
ACCGA007572GA007573
length5761,183
definitionB6Ng01-181G10.b B6Ng01-181G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,248,555 - 100,249,136)(100,055,274 - 100,056,376)
sequence
actatgaactttagagtagttaaagtgaaataaagattttacaatgggaa
tcttagtcaaatgcgttatttcataaagctacctagatggttgaagactc
ttcaaactttatcccgccgagtttgccatctcagtctgaggctgcatagc
actgtagaattcttgctcctccctgtctgccaagaggttaggagatagcc
cctcaagccttgaggctcctgggacccgcagtagggcatgaatacagagg
gaggtctttgttaatgatgtctaaggcattaccccaatagttttgaattt
ccatttaaaatcaacagcagaatacctaggatagctcaagcgaaccttgt
ggcagggcagtggggtggttagcaatgtaaggatatggagtttctgtgtc
aacatgggagccaggaatctgcatttgtaacaggcttactgccagctgac
ttgcctggcttaagtcttaagcatcactgttgcttcaagcaaccttggat
gcaggggatgtccctgggagacgatgagacaggaataaaatcaaagggca
aggtaggaggatgggggggtgatgga
gaattccaaggcatctttcaagagagaagatgggctgggcaggatgtgga
ggaaggaactgaggatggcaaaggaggatggccatagccacagctgcctc
acttctcacctcccgttggcctggcaaccagacagctgggtctttccatt
gtctcgttgcccctcactgccagaacaggtctaaccctagcaagggctct
tggtgttccacaggctgaaaggcaagtaagtcttttttttaaaaagatca
tttaagatccacctaaaaggccctttggtggcctgtaccagaagtcctag
ctactcaaggggctgtggaggaagatgcctggagtccaggaggatccctg
cccaaaacactgaaaacagtgataaataaacaaaactaaagccagtaaga
gagagcacgctttggacccggtagagaatctgaccttcaccacttagagc
ctgggtacacgtaagccactgaggatctatctgcaagtggaagcagctca
tctttgccctgcatgatacagtctgcatccctggtcactggcctccgtct
gctcatttgaagaaggctcgctctgagttcctggtgtttgctgctccttg
gtgagcattcatttataggataactgagggaaacgccagctcatgacttt
ccaaagcgaattctagcctggtgttcaaatatattttagcaattaaagca
ttataaaagaactcagacaaaacaatacaggtagcatatatcctcccaga
tattctgccttttagcttcttagttcatatacttaaatggaggaaataga
aacttagttttggaaaggtaaagaggtctgggatggggaaaaggaggcca
cttctcaaggggcagttcaaagtttcaataattaagcattgaacacgcca
tcctcaggttgctcgtcgctgaaatgaagtagaagagcagcctaaggcct
gaaccttgtgagctcagagctgatcagcagcggggactttcaagctggcc
tcaaagctgaaggttcagctgatgctggtaaatagatttagtgattctct
tgcaacaagcttacacaagctgagctgtacacctcatggaacaaatgaga
cgaactctcttacgaactcattctagttgggaccacactgaaggctgtca
gcaacggcaattgaaaccatactcaaatgagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_100248555_100249136
seq2: B6Ng01-181G10.b_43_624 (reverse)

seq1  TCCATCACCCCCCCATCCTCCTACCTTGCCCTTTGATTTTATTCCTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCACCCCCCCATCCTCCTACCTTGCCCTTTGATTTTATTCCTGTCT  50

seq1  CATCGTCTCCCAGGGACATCCCCTGCATCCAAGGTTGCTTGAAGCAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTCTCCCAGGGACATCCCCTGCATCCAAGGTTGCTTGAAGCAACAG  100

seq1  TGATGCTTAAGACTTAAGCCAGGCAAGTCAGCTGGCAGTAAGCCTGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTAAGACTTAAGCCAGGCAAGTCAGCTGGCAGTAAGCCTGTTAC  150

seq1  AAATGCAGATTCCTGGCTCCCATGTTGACACAGAAACTCCATATCCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGATTCCTGGCTCCCATGTTGACACAGAAACTCCATATCCTTAC  200

seq1  ATTGCTAACCACCCCACTGCCCTGCCACAAGGTTCGCTTGAGCTATCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAACCACCCCACTGCCCTGCCACAAGGTTCGCTTGAGCTATCCTA  250

seq1  GGTATTCTGCTGTTGATTTTAAATGGAAATTCAAAACTATTGGGGTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCTGCTGTTGATTTTAAATGGAAATTCAAAACTATTGGGGTAATG  300

seq1  CCTTAGACATCATTAACAAAGACCTCCCTCTGTATTCATGCCCTACTGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGACATCATTAACAAAGACCTCCCTCTGTATTCATGCCCTACTGCG  350

seq1  GGTCCCAGGAGCCTCAAGGCTTGAGGGGCTATCTCCTAACCTCTTGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCAGGAGCCTCAAGGCTTGAGGGGCTATCTCCTAACCTCTTGGCAG  400

seq1  ACAGGGAGGAGCAAGAATTCTACAGTGCTATGCAGCCTCAGACTGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAGGAGCAAGAATTCTACAGTGCTATGCAGCCTCAGACTGAGATG  450

seq1  GCAAACTCGGCGGGATAAAGTTTGAAGAGTCTTCAACCATCTAGGTAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTCGGCGGGATAAAGTTTGAAGAGTCTTCAACCATCTAGGTAGCT  500

seq1  TTATGAAATAACGCATTTGACTAAGATTCCCATTGTAAAATCTTTATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAATAACGCATTTGACTAAGATTCCCATTGTAAAATCTTTATTTC  550

seq1  ACTTTAACTACTCTAAAGTTCATAGTGAATTC  582
      ||||||||||||||||||||||||||||||||
seq2  ACTTTAACTACTCTAAAGTTCATAGTGAATTC  582

seq1: chr13_100055274_100056376
seq2: B6Ng01-181G10.g_64_1246

seq1  GAATTCCAAGGCATCTTTCAAGAGAGAAGATGGGCTGGGCAGGATGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGCATCTTTCAAGAGAGAAGATGGGCTGGGCAGGATGTGGA  50

seq1  GGAAGGAACTGAGGATGGCAAAGGAGGATGGCCATAGCCACAGCTGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAACTGAGGATGGCAAAGGAGGATGGCCATAGCCACAGCTGCCTC  100

seq1  ACTTCTCACCTCCCGTTGGCCTGGCAACCAGACAGCTGGGTCTTTCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCACCTCCCGTTGGCCTGGCAACCAGACAGCTGGGTCTTTCCATT  150

seq1  GTCTCGTTGCCCCTCACTGCCAGAACAGGTCTAACCCTAGCAAGGGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGTTGCCCCTCACTGCCAGAACAGGTCTAACCCTAGCAAGGGCTCT  200

seq1  TGGTGTTCCACAGGCTGAAAGGCAAGTAAGTCTTTTTTTTAAAAAGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTCCACAGGCTGAAAGGCAAGTAAGTCTTTTTTTTAAAAAGATCA  250

seq1  TTTAAGATCCACCTAAAAGGCCCTTTGGTGGCCTGTACCAGAAGTCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATCCACCTAAAAGGCCCTTTGGTGGCCTGTACCAGAAGTCCTAG  300

seq1  CTACTCAAGGGGCTGTGGAGGAAGATGCCTGGAGTCCAGGAGGATCCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAAGGGGCTGTGGAGGAAGATGCCTGGAGTCCAGGAGGATCCCTG  350

seq1  CCCAAAACACTGAAAACAGTGATAAATAAACAAAACTAAAGCCAGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACACTGAAAACAGTGATAAATAAACAAAACTAAAGCCAGTAAGA  400

seq1  GAGAGCACGCTTTGGACCCGGTAGAGAATCTGACCTTCACCACTTAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCACGCTTTGGACCCGGTAGAGAATCTGACCTTCACCACTTAGAGC  450

seq1  CTGGGTACACGTAAGCCACTGAGGATCTATCTGCAAGTGGAAGCAGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTACACGTAAGCCACTGAGGATCTATCTGCAAGTGGAAGCAGCTCA  500

seq1  TCTTTGCCCTGCATGATACAGTCTGCATCCCTGGTCACTGGCCTCCGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCCTGCATGATACAGTCTGCATCCCTGGTCACTGGCCTCCGTCT  550

seq1  GCTCATTTGAAGAAGGCTCGCTCTGAGTTCCTGGTGTTTGCTGCTCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTGAAGAAGGCTCGCTCTGAGTTCCTGGTGTTTGCTGCTCCTTG  600

seq1  GTGAGCATTCATTTATAGGATAACTGAGGGAAACGCCAGCTCATGACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCATTCATTTATAGGATAACTGAGGGAAACGCCAGCTCATGACTTT  650

seq1  CCAAAGCGAATTCTAGCCTGGTGTTCAAATATATTTTAGCAATTAAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCGAATTCTAGCCTGGTGTTCAAATATATTTTAGCAATTAAAGCA  700

seq1  TTATAAAAGAACTCAGACAAAACAATACAGGTAGCATATATCCTCCCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAGAACTCAGACAAAACAATACAGGTAGCATATATCCTCCCAGA  750

seq1  TATTCTGCCTTTTAGCTTCTTAGTTCATATACTTAAATGGAGGAAATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGCCTTTTAGCTTCTTAGTTCATATACTTAAATGGAGGAAATAGA  800

seq1  AACTTAGTTTTGGAAAGGTAAAGAGGTCTGGGATGGGGAAAAGGAGGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAGTTTTGGAAAGGTAAAGAGGTCTGGGATGGGGAAAAGGAGGCCA  850

seq1  CTTCTCAAAGGGGCAGTTCAAAGTTTCAATAATTAAGCATTGAACACGCC  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTC-AAGGGGCAGTTCAAAGTTTCAATAATTAAGCATTGAACACGCC  899

seq1  ATCCTCAGGTTGCTCGTCGCTGAAATGAAGTAGAAGAGCAGCCTAAGGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGGTTGCTCGTCGCTGAAATGAAGTAGAAGAGCAGCCTAAGGCC  949

seq1  TGAACC-TGTGAGCTCAGAGCTGATCAGCAGCGGGGACTTTCAAGCTGG-  998
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  TGAACCTTGTGAGCTCAGAGCTGATCAGCAGCGGGGACTTTCAAGCTGGC  999

seq1  CTCAAAGCTGAAGGGTCAGCTGATGCTGGTAAATAGAATTAGTGATTCCT  1048
      |||||||||||||| |||||||||||||||||||||| ||||||||||  
seq2  CTCAAAGCTGAAGGTTCAGCTGATGCTGGTAAATAGATTTAGTGATTC--  1047

seq1  TCCTGGCACAAAGCTACCACAAGCTGAGCTGTACA-CTCATGGGAACAAA  1097
        || |||  |||||  |||||||||||||||||| ||||| ||||||||
seq2  -TCTTGCAACAAGCTTACACAAGCTGAGCTGTACACCTCAT-GGAACAAA  1095

seq1  TGAGAC--------------------------------------------  1103
      ||||||                                            
seq2  TGAGACGAACTCTCTTACGAACTCATTCTAGTTGGGACCACACTGAAGGC  1145

seq1  --------------------------------------  1103
                                            
seq2  TGTCAGCAACGGCAATTGAAACCATACTCAAATGAGAC  1183