BAC Information

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BAC

Clone NameB6Ng01-182N01
Chromosome13 (Build37)
Map Location 102,426,433 - 102,568,990
singlet/doubletdoublet
Overlap genePik3r1
Upstream geneTaf9, Ccdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5, LOC619865, LOC619917, EG619937, 4933416M06Rik, LOC100039971, LOC100039983
Downstream geneCd180, Mast4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182N01.bB6Ng01-182N01.g
ACCGA008605GA008606
length434699
definitionB6Ng01-182N01.b B6Ng01-182N01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,426,433 - 102,426,869)(102,568,295 - 102,568,990)
sequence
tttagaactgtatattaaatacacaaaaatgcacattcaagaactgaaag
cgaatgcctgtaaagactgggacagtgagttgtgtgtgtgtgtgtgtgtg
tatacacgtacatgcttggaagttgttagttttatttttccagagtctaa
actctaatgttttattataaactttcttgaagcagaatgtcatgatgtta
agtgtgttgattctaaataaaactaaacaagagttcaaatttgaaagcca
ctgtgaagaaactctgggagcttggggagtttcttctggtctgcataacg
tcagcacaggagagtgacaaggacaggactcagctcatgagggtgcccag
ttaagtgaccatgtcctggtaagcccttagttagaagcctgccatgtagg
aaacacccagggcatctttgggcattcagtatcc
gaattcactctatagaccaagctagcctcgaactccaagatctgcctgtt
tctgccccacccccacccggctaaagctgtcattctaagaaggggctggg
tcaggggttcacctccacttgagttagagtctttgaatcttgatcacatt
aaaaatacctgtgttaagattaaaaaaataaaagacagaatggatttatg
aacatataatggaagaatcacatgccacaggatggagcacgggggtagga
ggcgaaagcctgttcttatcttcaagttagttttcctctgatcaccagac
cagaatgtgcctcagtgtggttagagtaagagaagactcagcgtgacttt
ttttttctaacagaaacaaatgtccagtcatctgagagcacaccaatagt
gtaaaatagaaaagtaactgtaatttaagggcttttttctttttacatta
ttaagtcagatgatttttttttcctaatactcatatctcgcatgtgcatt
tctggtttgaagaactttaaaccatgtttcaaagttacatttttaagttt
tagagcatggcataattctatgtttggaaattttaggacagctgaatgat
tttctatctgtatgtatctatctaatctatatttatcatttctggagtgg
gctgtaacacataaaaaaatcttcgtgataatgtgtttaccattatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102426433_102426869
seq2: B6Ng01-182N01.b_45_483

seq1  GAATTCTTTAGAACTGTATATTAAATACACAAAAATGCACATTCAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGAACTGTATATTAAATACACAAAAATGCACATTCAAGAAC  50

seq1  TGAAAGCGAATGCCTGTAAAGACTGGGACAGTGAGTTGTGTGTGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCGAATGCCTGTAAAGACTGGGACAGTGAGTTGTGTGTGTGTGTG  100

seq1  TGTGTGTATACACGTACATGCTTGGAAGTTGTTAGTTTTATTTTTCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATACACGTACATGCTTGGAAGTTGTTAGTTTTATTTTTCCAGA  150

seq1  GTCTAAACTCTAATGTTTTATTATAAACTTTCTTGAAGCAGAATGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAACTCTAATGTTTTATTATAAACTTTCTTGAAGCAGAATGTCATG  200

seq1  ATGTTAAGTGTGTTGATTCTAAATAAAACTAAACAAGAGTTCAAATTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGTGTGTTGATTCTAAATAAAACTAAACAAGAGTTCAAATTTGA  250

seq1  AAGCCACTGTGAAGAAACTCTGGGAGCTTGGGGAGTTTCTTCTGGTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTGTGAAGAAACTCTGGGAGCTTGGGGAGTTTCTTCTGGTCTGC  300

seq1  ATAACGTCAGCACAGGAGAGTGACAAGGACAGGACTCAGCTCATGAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGTCAGCACAGGAGAGTGACAAGGACAGGACTCAGCTCATGAGGGT  350

seq1  GCCCAGTTAAGTGACCATGTCCTGGTAAGCCCTTAGTTAGAAGCCTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTTAAGTGACCATGTCCTGGTAAGCCCTTAGTTAGAAGCCTGCCA  400

seq1  TGTAGGAAACACCCAGGGCATC-TTGGGCA-TCAGTATC  437
      |||||||||||||||||||||| ||||||| ||||||||
seq2  TGTAGGAAACACCCAGGGCATCTTTGGGCATTCAGTATC  439

seq1: chr13_102568295_102568990
seq2: B6Ng01-182N01.g_63_761 (reverse)

seq1  GATATAATGGT-AACACATTATCACG-AGATTTTTTTATGTG-TACAGCC  47
      ||||||||||| |||||||||||||| ||||||||||||||| |||||||
seq2  GATATAATGGTAAACACATTATCACGAAGATTTTTTTATGTGTTACAGCC  50

seq1  CACTCCAGAAATGATAAATATAGATTAGATAGATACATACAGATAGAAAA  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAGAAATGATAAATATAGATTAGATAGATACATACAGATAGAAAA  100

seq1  TCATTCAGCTGTCCTAAAATTTCCAAACATAGAATTATGCCATGCTCTAA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAGCTGTCCTAAAATTTCCAAACATAGAATTATGCCATGCTCTAA  150

seq1  AACTTAAAAATGTAACTTTGAAACATGGTTTAAAGTTCTTCAAACCAGAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAAAATGTAACTTTGAAACATGGTTTAAAGTTCTTCAAACCAGAA  200

seq1  ATGCACATGCGAGATATGAGTATTAGGAAAAAAAAATCATCTGACTTAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATGCGAGATATGAGTATTAGGAAAAAAAAATCATCTGACTTAAT  250

seq1  AATGTAAAAAGAAAAAAGCCCTTAAATTACAGTTACTTTTCTATTTTACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAAAGAAAAAAGCCCTTAAATTACAGTTACTTTTCTATTTTACA  300

seq1  CTATTGGTGTGCTCTCAGATGACTGGACATTTGTTTCTGTTAGAAAAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGTGTGCTCTCAGATGACTGGACATTTGTTTCTGTTAGAAAAAAA  350

seq1  AAGTCACGCTGAGTCTTCTCTTACTCTAACCACACTGAGGCACATTCTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACGCTGAGTCTTCTCTTACTCTAACCACACTGAGGCACATTCTGG  400

seq1  TCTGGTGATCAGAGGAAAACTAACTTGAAGATAAGAACAGGCTTTCGCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGATCAGAGGAAAACTAACTTGAAGATAAGAACAGGCTTTCGCCT  450

seq1  CCTACCCCCGTGCTCCATCCTGTGGCATGTGATTCTTCCATTATATGTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCCCGTGCTCCATCCTGTGGCATGTGATTCTTCCATTATATGTTC  500

seq1  ATAAATCCATTCTGTCTTTTATTTTTTTAATCTTAACACAGGTATTTTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCCATTCTGTCTTTTATTTTTTTAATCTTAACACAGGTATTTTTA  550

seq1  ATGTGATCAAGATTCAAAGACTCTAACTCAAGTGGAGGTGAACCCCTGAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATCAAGATTCAAAGACTCTAACTCAAGTGGAGGTGAACCCCTGAC  600

seq1  CCAGCCCCTTCTTAGAATGACAGCTTTAGCCGGGTGGGGGTGGGGCAGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCCTTCTTAGAATGACAGCTTTAGCCGGGTGGGGGTGGGGCAGAA  650

seq1  ACAGGCAGATCTTGGAGTTCGAGGCTAGCTTGGTCTATAGAGTGAATTC  696
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGATCTTGGAGTTCGAGGCTAGCTTGGTCTATAGAGTGAATTC  699