BAC Information

Click to search

BAC

Clone NameB6Ng01-182P19
Chromosome13 (Build37)
Map Location 7,256,193 - 7,257,256
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516, LOC791083, LOC382722, Adarb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182P19.bB6Ng01-182P19.g
ACCGA008731GA008732
length9971,075
definitionB6Ng01-182P19.b B6Ng01-182P19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaaacaacatttaataagaaagtgaaggaacagactcagag
tataaattggtatgccatttatatttcacaatttatacgaatgtgcatat
aacttaataccaatatctgctccctactattttgagaaaataaagagagc
aaggtaatatctgtgggcaggaataaaatgtcaataagtggaaacatttg
caacaaggctaacttcatttttattttatttttataaattaggtattttc
ttcatttacatttcaaatgctatcccaaaagtcccccataccctcccccc
tcccactcccctaaccacccactcccacaggcattcccctgtactgaggc
atataaagtttgcaagaccaaggggcctctcttcccagtgatggccgact
aggccatcttctgctacatatgcaggtagagacatgagctccggggtact
ggttaattcatactgttgttccacctataaggttgcagatccctttagct
tcttgggtactttctccagctccaccattggggaccctgtgttccatcca
atagctgactgtgagcatccacttctgtgtttgctaggcccaaaaatagc
ctcacaagagacagctatatcagggtcctttcagcaaaatcttgctggtg
tatgcaatggtgtcagcgtttggaggctgattatgggatggatccccagg
tgtggcagtctctagatggtccatcctttcgtcacagctccaaactttgt
ctttgtaattccttccatgggtattttgttcccaattctaagaaggggca
aagtgtccacactttggtcttcattcttcttgagtttcatatgttttgca
aattgtatcttatatcttgggtatcctaagtttctgggctaatatccact
tatcagtgagtacatattatgtgagttctttgtgattgggttacctcatt
caggatgataccctcaggtccatccatttgcctaagtattcaataaa

gaattcccagaattacaaaagcaacattgcaaggtaattgaatatactca
gatttaggtcttaattatctttttgattggaggtttatctttagcatggt
attttgataatgtaagaggaccaattattttgtatgatctcccaccgagc
taaggaaatgcagactgtaattttgagataagtaacttccgtgggaatta
tgttgtaagagtgtatcaattatggctggcttttagttatatttttgccg
gtatttaagcattttcaaatgactgcattttaacagtgtcttcatcatcc
cttacttctgcatcttttagtaggaatagtcagtcatatcatttgaactt
ttgtggggacgtaaacactgagaatgatggagaaagtacttaaaattgtg
tttcttttgaggaagacggagttgaactcacaaagtcatccaagttttac
ttatatatgtgtagtagaacagtagaggttaccatccataactgagcctg
aaaacacatgtatatctgtgaagtgcatcacccaaacaagggagatagga
agctgagaactgaacatcagggtatacataagggagataggctgagagga
cctgtggttgggtgtaggatacctactggttggccaaaatgcttacctca
tgttcagaattacagtatttcagataaatcagtgagggtaagaaaagacc
attttcaccttgtggcaatttttaaaaagttgcttaatccactgggttgc
taacctctgggttacatactatgctgttctcctcttctacaattcatctt
tccttcctaattcaacatggactgccagatggactgttgacttttaggtt
ttcatggctgctgttggctgtgtacctttatcagttcacaacactgccat
tagaattcaatatgacactttccacaacttgaccaggaagtctggctttg
gcaagcctggaaaacatggtccagcttttttcgttttccttttttccaag
ttactccattggaaatgaaggacctctaatcactaagatgtggtttgaac
tctcctgcaatgggcatgggggtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7256193_7257256
seq2: B6Ng01-182P19.g_65_1139

seq1  GAATTCCCAGAATTACAAAAGCAACATTGCAAGGTAATTGAATATACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAATTACAAAAGCAACATTGCAAGGTAATTGAATATACTCA  50

seq1  GATTTAGGTCTTAATTATCTTTTTGATTGGAGGTTTATCTTTAGCATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGGTCTTAATTATCTTTTTGATTGGAGGTTTATCTTTAGCATGGT  100

seq1  ATTTTGATAATGTAAGAGGACCAATTATTTTGTATGATCTCCCACCGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATAATGTAAGAGGACCAATTATTTTGTATGATCTCCCACCGAGC  150

seq1  TAAGGAAATGCAGACTGTAATTTTGAGATAAGTAACTTCCGTGGGAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAATGCAGACTGTAATTTTGAGATAAGTAACTTCCGTGGGAATTA  200

seq1  TGTTGTAAGAGTGTATCAATTATGGCTGGCTTTTAGTTATATTTTTGCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAAGAGTGTATCAATTATGGCTGGCTTTTAGTTATATTTTTGCCG  250

seq1  GTATTTAAGCATTTTCAAATGACTGCATTTTAACAGTGTCTTCATCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAGCATTTTCAAATGACTGCATTTTAACAGTGTCTTCATCATCC  300

seq1  CTTACTTCTGCATCTTTTAGTAGGAATAGTCAGTCATATCATTTGAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCTGCATCTTTTAGTAGGAATAGTCAGTCATATCATTTGAACTT  350

seq1  TTGTGGGGACGTAAACACTGAGAATGATGGAGAAAGTACTTAAAATTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGGACGTAAACACTGAGAATGATGGAGAAAGTACTTAAAATTGTG  400

seq1  TTTCTTTTGAGGAAGACGGAGTTGAACTCACAAAGTCATCCAAGTTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGAGGAAGACGGAGTTGAACTCACAAAGTCATCCAAGTTTTAC  450

seq1  TTATATATGTGTAGTAGAACAGTAGAGGTTACCATCCATAACTGAGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATGTGTAGTAGAACAGTAGAGGTTACCATCCATAACTGAGCCTG  500

seq1  AAAACACATGTATATCTGTGAAGTGCATCACCCAAACAAGGGAGATAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATGTATATCTGTGAAGTGCATCACCCAAACAAGGGAGATAGGA  550

seq1  AGCTGAGAACTGAACATCAGGGTATACATAAGGGAGATAGGCTGAGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAACTGAACATCAGGGTATACATAAGGGAGATAGGCTGAGAGGA  600

seq1  CCTGTGGTTGGGTGTAGGATACCTACTGGTTGGCCAAAATGCTTACCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGTTGGGTGTAGGATACCTACTGGTTGGCCAAAATGCTTACCTCA  650

seq1  TGTTCAGAATTACAGTATTTCAGATAAATCAGTGAGGGTAAGAAAAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGAATTACAGTATTTCAGATAAATCAGTGAGGGTAAGAAAAGACC  700

seq1  ATTTTCACCTTGTGGCAATTTTTAAAAAGTTGCTTAATCCACTGGGTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACCTTGTGGCAATTTTTAAAAAGTTGCTTAATCCACTGGGTTGC  750

seq1  TAACCTCTGGGTTACATACTATGCTGTTCTCCTCTTCTACAATTCATC-T  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAACCTCTGGGTTACATACTATGCTGTTCTCCTCTTCTACAATTCATCTT  800

seq1  TCCTTCCTAATTCAACATGGACTGCCAGATGGACTGTTGAC-TTTAGGTT  848
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCCTTCCTAATTCAACATGGACTGCCAGATGGACTGTTGACTTTTAGGTT  850

seq1  TTCATGGCTGCTGTTGGCTGTGTACC-TTATCAGTTCACAACACTGCCAT  897
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTCATGGCTGCTGTTGGCTGTGTACCTTTATCAGTTCACAACACTGCCAT  900

seq1  TAGAATCAAATA-GACAC-TTCCAC-ACTTGA-CAGGAAGTCTGGCTTT-  942
      ||||||  |||| ||||| |||||| |||||| |||||||||||||||| 
seq2  TAGAATTCAATATGACACTTTCCACAACTTGACCAGGAAGTCTGGCTTTG  950

seq1  GCAAGC--TGAAAACATGGT-CAGC-TTTTTCG-TTTCCTTTTTT-CAAG  986
      ||||||   ||||||||||| |||| ||||||| ||||||||||| ||||
seq2  GCAAGCCTGGAAAACATGGTCCAGCTTTTTTCGTTTTCCTTTTTTCCAAG  1000

seq1  -TACTCCA-TGGAAATGAAGGGGCCTCCAAATCACTAAGATGT-GTTTG-  1032
       ||||||| |||||||||| || ||| | |||||||||||||| ||||| 
seq2  TTACTCCATTGGAAATGAA-GGACCT-CTAATCACTAAGATGTGGTTTGA  1048

seq1  ACTCTCCTGCAATGGGCATGGTGTCTGGGTCT  1064
      |||||||||||||||||||||     ||||||
seq2  ACTCTCCTGCAATGGGCATGG-----GGGTCT  1075


| Home | SequenceCutter | Blast | Download |