BAC Information

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BAC

Clone NameB6Ng01-184O03
Chromosome13 (Build37)
Map Location 7,782,633 - 7,783,834
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667611, EG623516
Downstream geneLOC791083, LOC382722, Adarb2, EG666941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184O03.bB6Ng01-184O03.g
ACCGA010147GA010148
length1,2031,150
definitionB6Ng01-184O03.b B6Ng01-184O03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttaattggagcagaagttataagtaagagagaaattccagt
tggagctaggaataagactgtgttcatgatctgaggtttttgatttttag
actgtgatgttttctataattaagtagtcaggttgatattattggctgtt
taatagtatgcttgtcacctactttactgacaactttaattctcttaatg
acagtgctaaatcatttgacatgaagagatacaaaaaattccaaagtact
acaagctttggaattttttgtatctctgggactgcgtattgtacattgat
acccactcatgtgaatatggtgattgtaaatgactatgaaatttaactat
gtatttttgaactatggaaaatgttgacaatctgttgtatcaaataatga
ttttacagattatttttatcagtaaaattcttcctcattgtattattcaa
ctatgctaactagttttatggtattttgacaaaaattatagctattttgg
ggaaagagaccctcaactgagaaaatgtctccaccacactggcctgtggg
caacactattgggcagtctcttgattcataactgaagtgggcaggcccag
ctcatagtaggaggtgcatcccctggccttgtgctcctgagtacgatagg
aaaacaggatgaacaagacttaaggagaaatgcagtaagaagtctgcccg
tgtggcttgaccttggttcctacttcaaggtgctggccctacttgagttc
ttgtcctgactttccacagtaggactgcaatttgtggggtgaaagcggac
cttctctctctgagtaggttttaatcatggtatctttccacagcaaaaga
aaccataatgaagataccaacttatatgtaccaaaaatagttacattatc
tcaaaatgctgaacttattcaatcataaacagggtttcattttggaagaa
ataggttttgttgagtagctaattaatatgaaaagattagaatcatagtg
ttcatttggaaaataggtgaattaaggagatgctgagtaaacagaattca
taaatatgtggtcttgctaaaggaggttcttgtgtcacacaaagttccag
ttattaacaatgaacacaaatgagagatcttattggaaaggccatgtgat
ttagaatgacggctagtgaaacaccgcagtaatttgcaacccacttcata
aca

gaattctcatccaaggaataccgaagggctgaggagcacttgaaaaaatg
ttcaacatccttaatcatcagggtaatgcaaagcaaaccatccctgagat
tccaactcacaccagtaagaatggctaggctaaaaaattcatgtgacagc
agatgttggcaaggatgtggagaaagagaaacacttctccattgctggtg
ggaatgcaaacctatacagccactctggaagtcagtctggagattcctca
gaaaactggacatagtactactcatagatccagcaatacctctcctgggt
atatactcagaagatgttccaactggtaataaggacacatgctccactat
gttcatagcagccctatttattatcgccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagtaaatgtggtacatttatacaatg
gagttccactcagctattaaaaacaatggatttatgaaattcttggaaaa
attgatgaatctggacgatatcctgagtgaggtaacccaatcacaaaaga
agtaacttgatatgcactcactgataagtggatattagtccagaaaccta
ggacacccaagatacaacttcccaaacacaagaaaatccagaaggaagac
caactcatggatacttcattcctcccaagaatagggagtaaaatatccat
ggaaggatttgcagagacaaagtttagagcaaggacgaaaggatggacta
tccagagactgccccacctgggggtttgtcccataatcagccaccaaatg
cagacactaatgcatatgccagcaagattttgttgaaagcaccctgatag
tgctgtctcctgtgaggctttgccagtgtctggcaaatacagaagtggat
gctcacagtcatctataggatggaacacagggcccccaatgtaggagcta
cagaaagtacccagagctgaaggggtctgcaaccctataggtgaaacaac
aatatgaactaccagtacccccagactcatgtcttttagctgcatatata
gcagaagatgccttgtcatcatggaagaagacctttgtctagcaaccttt
attacccaagaacagggcaaggcaaggctaggaactgtgtgtgttgacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7782633_7783834
seq2: B6Ng01-184O03.b_40_1242

seq1  GAATTCAGTTTAATTGGAGCAGAAGTTATAAGTAAGAGAGAAATTCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTAATTGGAGCAGAAGTTATAAGTAAGAGAGAAATTCCAGT  50

seq1  TGGAGCTAGGAATAAGACTGTGTTCATGATCTGAGGTTTTTGATTTTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTAGGAATAAGACTGTGTTCATGATCTGAGGTTTTTGATTTTTAG  100

seq1  ACTGTGATGTTTTCTATAATTAAGTAGTCAGGTTGATATTATTGGCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATGTTTTCTATAATTAAGTAGTCAGGTTGATATTATTGGCTGTT  150

seq1  TAATAGTATGCTTGTCACCTACTTTACTGACAACTTTAATTCTCTTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTATGCTTGTCACCTACTTTACTGACAACTTTAATTCTCTTAATG  200

seq1  ACAGTGCTAAATCATTTGACATGAAGAGATACAAAAAATTCCAAAGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCTAAATCATTTGACATGAAGAGATACAAAAAATTCCAAAGTACT  250

seq1  ACAAGCTTTGGAATTTTTTGTATCTCTGGGACTGCGTATTGTACATTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTTTGGAATTTTTTGTATCTCTGGGACTGCGTATTGTACATTGAT  300

seq1  ACCCACTCATGTGAATATGGTGATTGTAAATGACTATGAAATTTAACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCATGTGAATATGGTGATTGTAAATGACTATGAAATTTAACTAT  350

seq1  GTATTTTTGAACTATGGAAAATGTTGACAATCTGTTGTATCAAATAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTGAACTATGGAAAATGTTGACAATCTGTTGTATCAAATAATGA  400

seq1  TTTTACAGATTATTTTTATCAGTAAAATTCTTCCTCATTGTATTATTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGATTATTTTTATCAGTAAAATTCTTCCTCATTGTATTATTCAA  450

seq1  CTATGCTAACTAGTTTTATGGTATTTTGACAAAAATTATAGCTATTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTAACTAGTTTTATGGTATTTTGACAAAAATTATAGCTATTTTGG  500

seq1  GGAAAGAGACCCTCAACTGAGAAAATGTCTCCACCACACTGGCCTGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGACCCTCAACTGAGAAAATGTCTCCACCACACTGGCCTGTGGG  550

seq1  CAACACTATTGGGCAGTCTCTTGATTCATAACTGAAGTGGGCAGGCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTATTGGGCAGTCTCTTGATTCATAACTGAAGTGGGCAGGCCCAG  600

seq1  CTCATAGTAGGAGGTGCATCCCCTGGCCTTGTGCTCCTGAGTACGATAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGTAGGAGGTGCATCCCCTGGCCTTGTGCTCCTGAGTACGATAGG  650

seq1  AAAACAGGATGAACAAGACTTAAGGAGAAATGCAGTAAGAAGTCTGCCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGATGAACAAGACTTAAGGAGAAATGCAGTAAGAAGTCTGCCCG  700

seq1  TGTGGCTTGACCTTGGTTCCTACTTCAAGGTGCTGGCCCTACTTGAGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTGACCTTGGTTCCTACTTCAAGGTGCTGGCCCTACTTGAGTTC  750

seq1  TTGTCCTGACTTTCCACAGTAGGACTGCAATTTGTGGGGTGAAAGCGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTGACTTTCCACAGTAGGACTGCAATTTGTGGGGTGAAAGCGGAC  800

seq1  CTTCTCTCTCTGAGTAGGTTTTAATCATGGTATC-TTCCACAGCAAAAGA  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTCTCTCTCTGAGTAGGTTTTAATCATGGTATCTTTCCACAGCAAAAGA  850

seq1  AACCATAATGAAGATACCAACTTATATGTACCAAAAATAGTTACATTATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAATGAAGATACCAACTTATATGTACCAAAAATAGTTACATTATC  900

seq1  TCAAAATGCTGAACTTATTCAATCATAAACAGGGTTTCATTTTGGAAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGCTGAACTTATTCAATCATAAACAGGGTTTCATTTTGGAAGAA  950

seq1  ATAGGTTTTGTTGAGTAGCTAATTAATATGAAAAGATTAGAATCATAGGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATAGGTTTTGTTGAGTAGCTAATTAATATGAAAAGATTAGAATCATA-GT  999

seq1  GTTCATTT-GAAAATAGGTGAAAATTAA-GAGATGCTGAGTAAACAGAA-  1046
      |||||||| |||||||||||  |||||| |||||||||||||||||||| 
seq2  GTTCATTTGGAAAATAGGTG--AATTAAGGAGATGCTGAGTAAACAGAAT  1047

seq1  TCATAAATATGTGGTCTTGCTAAAGGAAGTTC-TGTGTCACACAAAGGTT  1095
      ||||||||||||||||||||||||||| |||| |||||||||||||| | 
seq2  TCATAAATATGTGGTCTTGCTAAAGGAGGTTCTTGTGTCACACAAAGTTC  1097

seq1  CAGTTAATAACAAATGACAACAAATATGAGATTCTTAAT-GAAAGGCAAT  1144
      |||||| |||| |||||  ||||||  |||| ||||| | ||||||| ||
seq2  CAGTTATTAAC-AATGAACACAAATGAGAGA-TCTTATTGGAAAGGCCAT  1145

seq1  G---ATTAGAATTAGTGGTATAGTGAAAACCAGCAGTAATTTGCAAACCA  1191
      |    |||||||  |  |  ||||||||  | |||||||||||||| |||
seq2  GTGATTTAGAAT--GACGGCTAGTGAAACACCGCAGTAATTTGCAACCCA  1193

seq1  CTTCTATAACA  1202
      |||| ||||||
seq2  CTTC-ATAACA  1203


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