BAC Information

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BAC

Clone NameB6Ng01-185D02
Chromosome13 (Build37)
Map Location 63,971,713 - 64,130,603
singlet/doubletdoublet
Overlap gene9330134C04Rik, EG665575
Upstream geneFbp1, LOC100042090, EG665524, 2010111I01Rik, Fancc, Ptch1, C030010C08Rik, 0610007P08Rik
Downstream geneHsd17b3, Slc35d2, Zfp367, Habp4, Cdc14b, 1110018J18Rik, Ctsl, Ccrk, LOC665612, 1190003K10Rik, LOC218298, Ppia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185D02.bB6Ng01-185D02.g
ACCGA010370GA010371
length1,155737
definitionB6Ng01-185D02.b B6Ng01-185D02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,129,451 - 64,130,603)(63,971,713 - 63,972,447)
sequence
gaattctctcaggaatctcatgctggtagaagagaaagccaaaccccatg
ctaagccagaggaggatagatacacatatacctggccctctattgaaact
tgaactctcacttcaggactccgaagatggccttgaggaaatcactttcc
gatgtggtcatatctccttgttctgcgtttcactattaatttctattaat
ttgctattttaattgttttatcaaagaaggtggccacacgtagcttgttt
ggatatagactgtgtgaagtccaagcctagtaacctaactacatgtacaa
ctgctggaaggcacttagacctatgacatctcaggaagctatagaagtgt
gtgccacactttatccatggggactctaagtagtattctgtgtgtggcaa
acccaagctatgctttggggaattttctgaagatttttttttgtttctct
ctctctctgtatgtatgtgtgagagacaaattttctcacatagctcagat
tggccttgaactcatggtaaacccttttcttgggtcttctgagcactggg
cttagagtcataggccccatttctgacttttctgaatatttgtgatctgt
gattaactgaatattggatattgaacctgaggatactaagggccaaatat
agagttttaaattttaccttatatttgaatattaattcaactgtttctca
tgtttatcctgaacaatagatttttttaaaaaaatctctattttacaaag
aagggtttctgaaactgaggtcatagcctataccccaagaagtcaagttg
acccactgttgtctggacttcagcctcattctgtaaggcagcctgacaag
ctgtacttggagacaagctcccactagagcaggtgtcttttcccttcttt
cggcatgagagtcttggagaaatcccctctgctttggggttcattgtttc
agtagtcttataaccagactgagagacacaagtctcttttgaatatcctt
tccacctggctggttacaacagtctcatacctgtagcctaaggatggcct
ggaaattcactatctagcccagcttggcctcagacctttgtgcagatcct
ctgcccccatcctctgcgactgaagctagagtcatcattctgggccttga
tcctc
gaattcttgggcaaatgtttgacacttttgtgccttccaacagtgctttt
agtaaaattgaacacaggcactagttttgtatcctgtgaaactgtgagtt
tctttcttagcaaatgagaaagtattgttaagaatgcaaaccctcttaca
cttagcctgcctttgcttgtttttgtttgtttgtttggttggttggttgg
tttttgttttgtttctgttttcttttttggttgttttcaccctgtattta
cagctgtgtatattcttccttgtggaaattacagagggaaggccaagtgg
aagctggcatcatgacagccacaacatggttgaaaggggaaccttcagca
caagaactagaaacagtgggtacccagaaaataaggactgtgacatcttt
ttcctttactcttttccttcattcttcagtacgaaaaaagagaaacttct
aaaaactcagggatacaaagtgaatgaaaataattattacagtgattaat
atttataaaaacaaattcaggagcagtcaatcacaaattaaacatcctgt
gttagtgaacacaccagctttattatttattatcattattattgttgttg
ttgttgttgttgttgttttattaaaggacaagctaaatagagaaatgacc
attagtgtgtaatcaaaaccattctgtaaatcagagcgagtatttgtatt
ctttgagtctgtgaccttaagatctcatcattcttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_64129451_64130603
seq2: B6Ng01-185D02.b_46_1200 (reverse)

seq1  GAGGACCAAGACCCAGAATGATGACTCTTAGC-TCAGTCGCAGAGGATGG  49
      ||||| |||| |||||||||||||||| |||| |||||||||||||||||
seq2  GAGGATCAAGGCCCAGAATGATGACTC-TAGCTTCAGTCGCAGAGGATGG  49

seq1  GGCAGGAGGATCTGCACAAA-GTCTGAGGCCAGCTTGGGCTAGATAGTGA  98
      ||   ||||||||||||||| |||||||||||   |||||||||||||||
seq2  GGGCAGAGGATCTGCACAAAGGTCTGAGGCCAAGCTGGGCTAGATAGTGA  99

seq1  A-TTCCAGGCCAT-CTTAGGCTACAGGGTATGAGACTGTTGTAACCAGCC  146
      | ||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  ATTTCCAGGCCATCCTTAGGCTACA-GGTATGAGACTGTTGTAACCAGCC  148

seq1  AGGTGGAAAGGATATTCAAAAAGAGACTTGTGTCTCTCAGTCTGGTTATA  196
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGTGGAAAGGATATTC-AAAAGAGACTTGTGTCTCTCAGTCTGGTTATA  197

seq1  AGACTACTGAAACAATGAACCCCAAAGCAGAGGGGATTTCTCCAAGACTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACTGAAACAATGAACCCCAAAGCAGAGGGGATTTCTCCAAGACTC  247

seq1  TCATGCCGAAAGAA-GGAAAAGACACCTGCTCTAGTGGGAGCTTGTCTCC  295
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCATGCCGAAAGAAGGGAAAAGACACCTGCTCTAGTGGGAGCTTGTCTCC  297

seq1  AAGTACAGCTTGTCAGGCTGCCTTACAGAATGAGGCTGAAGTCCAGACAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAGCTTGTCAGGCTGCCTTACAGAATGAGGCTGAAGTCCAGACAA  347

seq1  CAGTGGGTCAACTTGACTTCTTGGGGTATAGGCTATGACCCCAGTTTCAG  395
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAGTGGGTCAACTTGACTTCTTGGGGTATAGGCTATGACCTCAGTTTCAG  397

seq1  AAACCCTTCTTTGTAAAATAGAGATTTTTTTAAAAAAATCTATTGTTCAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTCTTTGTAAAATAGAGATTTTTTTAAAAAAATCTATTGTTCAG  447

seq1  GATAAACATGAGAAACAGTTGAATTAATATTCAAATATAAGGTAAAATTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACATGAGAAACAGTTGAATTAATATTCAAATATAAGGTAAAATTT  497

seq1  AAAACTCTATATTTGGCCCTTAGTATCCTCAGGTTCAATATCCAATATTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTATATTTGGCCCTTAGTATCCTCAGGTTCAATATCCAATATTC  547

seq1  AGTTAATCACAGATCACAAATATTCAGAAAAGTCAGAAATGGGGCCTATG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATCACAGATCACAAATATTCAGAAAAGTCAGAAATGGGGCCTATG  597

seq1  ACTCTAAGCCCAGTGCTCAGAAGACCCAAGAAAAGGGTTTACCATGAGTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAGCCCAGTGCTCAGAAGACCCAAGAAAAGGGTTTACCATGAGTT  647

seq1  CAAGGCCAATCTGAGCTATGTGAGAAAATTTGTCTCTCACACATACATAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCAATCTGAGCTATGTGAGAAAATTTGTCTCTCACACATACATAC  697

seq1  AGAGAGAGAGAGAAACAAAAAAAAATCTTCAGAAAATTCCCCAAAGCATA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAAACAAAAAAAAATCTTCAGAAAATTCCCCAAAGCATA  747

seq1  GCTTGGGTTTGCCACACACAGAATACTACTTAGAGTCCCCATGGATAAAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGTTTGCCACACACAGAATACTACTTAGAGTCCCCATGGATAAAG  797

seq1  TGTGGCACACACTTCTATAGCTTCCTGAGATGTCATAGGTCTAAGTGCCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCACACACTTCTATAGCTTCCTGAGATGTCATAGGTCTAAGTGCCT  847

seq1  TCCAGCAGTTGTACATGTAGTTAGGTTACTAGGCTTGGACTTCACACAGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAGTTGTACATGTAGTTAGGTTACTAGGCTTGGACTTCACACAGT  897

seq1  CTATATCCAAACAAGCTACGTGTGGCCACCTTCTTTGATAAAACAATTAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCCAAACAAGCTACGTGTGGCCACCTTCTTTGATAAAACAATTAA  947

seq1  AATAGCAAATTAATAGAAATTAATAGTGAAACGCAGAACAAGGAGATATG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAAATTAATAGAAATTAATAGTGAAACGCAGAACAAGGAGATATG  997

seq1  ACCACATCGGAAAGTGATTTCCTCAAGGCCATCTTCGGAGTCCTGAAGTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATCGGAAAGTGATTTCCTCAAGGCCATCTTCGGAGTCCTGAAGTG  1047

seq1  AGAGTTCAAGTTTCAATAGAGGGCCAGGTATATGTGTATCTATCCTCCTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCAAGTTTCAATAGAGGGCCAGGTATATGTGTATCTATCCTCCTC  1097

seq1  TGGCTTAGCATGGGGTTTGGCTTTCTCTTCTACCAGCATGAGATTCCTGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGCATGGGGTTTGGCTTTCTCTTCTACCAGCATGAGATTCCTGA  1147

seq1  GAGAATTC  1153
      ||||||||
seq2  GAGAATTC  1155

seq1: chr13_63971713_63972447
seq2: B6Ng01-185D02.g_67_803

seq1  GAATTCTTGGGCAAATGTTTGACACTTTTGTGCCTTCCAACAGTGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGCAAATGTTTGACACTTTTGTGCCTTCCAACAGTGCTTTT  50

seq1  AGTAAAATTGAACACAGGCACTAGTTTTGTATCCTGTGAAACTGTGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATTGAACACAGGCACTAGTTTTGTATCCTGTGAAACTGTGAGTT  100

seq1  TCTTTCTTAGCAAATGAGAAAGTATTGTTAAGAATGCAAACCCTCTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTAGCAAATGAGAAAGTATTGTTAAGAATGCAAACCCTCTTACA  150

seq1  CTTAGCCTGCCTTTGCTTGTTTTTGTTTGTTTGTTTGGTTGGTTGGTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCTGCCTTTGCTTGTTTTTGTTTGTTTGTTTGGTTGGTTGGTTGG  200

seq1  TTTTTGTTTTGTTTCTGTTTTCTTTTTTGGTTGTTTTCACCCTGTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTGTTTCTGTTTTCTTTTTTGGTTGTTTTCACCCTGTATTTA  250

seq1  CAGCTGTGTATATTCTTCCTTGTGGAAATTACAGAGGGAAGGCCAAGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGTATATTCTTCCTTGTGGAAATTACAGAGGGAAGGCCAAGTGG  300

seq1  AAGCTGGCATCATGACAGCCACAACATGGTTGAAAGGGGAACCTTCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGCATCATGACAGCCACAACATGGTTGAAAGGGGAACCTTCAGCA  350

seq1  CAAGAACTAGAAACAGTGGGTACCCAGAAAATAAGGACTGTGACATCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACTAGAAACAGTGGGTACCCAGAAAATAAGGACTGTGACATCTTT  400

seq1  TTCCTTTACTCTTTTCCTTCATTCTTCAGTACGAAAAAAGAGAAACTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTACTCTTTTCCTTCATTCTTCAGTACGAAAAAAGAGAAACTTCT  450

seq1  AAAAACTCAGGGATACAAAGTGAATGAAAATAATTATTACAGTGATTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCAGGGATACAAAGTGAATGAAAATAATTATTACAGTGATTAAT  500

seq1  ATTTATAAAAACAAATTCAGGAGCAGTCAATCACAAATTAAACATCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAAAACAAATTCAGGAGCAGTCAATCACAAATTAAACATCCTGT  550

seq1  GTTAGTGAACACACCAGCTTTATTATTTATTATCATTATTATTGTTGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGAACACACCAGCTTTATTATTTATTATCATTATTATTGTTGTTG  600

seq1  TTGTTGTTGTTGTTGTTTTATTAAAGGACAAGCTAAATAGAGAAATGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTGTTGTTTTATTAAAGGACAAGCTAAATAGAGAAATGACC  650

seq1  ATTAGTGTGT-ATCAAAACCATTCTGTAAATCAGAGCGAGTA-TTGTATT  698
      |||||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  ATTAGTGTGTAATCAAAACCATTCTGTAAATCAGAGCGAGTATTTGTATT  700

seq1  CTTTGAGTCTGTGACCTTAAGATCTCATCATTCTTGA  735
      |||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGTCTGTGACCTTAAGATCTCATCATTCTTGA  737