BAC Information

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BAC

Clone NameB6Ng01-186A17
Chromosome13 (Build37)
Map Location 80,114,644 - 80,115,817
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925
Downstream geneLOC382780, EG666933, Arrdc3, LOC666964, LOC100043074
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186A17.bB6Ng01-186A17.g
ACCGA010994GA010995
length1,171812
definitionB6Ng01-186A17.b B6Ng01-186A17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatactgattctgtgcacatggtacataggagttttccctcttaa
gaatgaaattaaaatgtatgaagattttatatatcttcataaaaaatttt
acaaaattaaaacgattaattttgcttccgagcattatacaaatgaatat
acaagagaacagtcaaataataatttaaactgaatgccaaacatttttgc
atactttgtgaaattataataattgattaagctcagaatgaatcaactaa
gaacagtcatccacactgaacgtatggtcatattctccaagtgtaatgca
acactatgctcagtaaagaagaatagccagataagtataaattttactta
agattttatcatttttctctacttagtttgactccacttgggtattttat
gacacaggactgaaaatgtgaccattactgtaattttttctattagtgaa
aattgcaacacaaaataggtaatgcccatggacaatagcacccctaaacg
tctctccacaaaagcttattttactgtcacttaaggaactcattcctctt
ccatgagacttacacgctgctttacaaatataacatactagcaacattgt
ggagaaccattattcttgctactggaattttttaaaacaagaaaaatcta
gcttgaaaataatgaccaagtgttcttagttctccgtaccaggtgttggg
tctcagagattttgtggaatgtgtaattttcttttagtttttctccatct
gaaaattagcaacatatgagacagtatgtatcatttttattaaaatcatt
tcatttttatcatatcagcgaaataaaaatagatcgacttcattataaat
aagagtggttaaaccctctcttattcagaagccactgcaagttcaatatg
aagatgggtttaccatgaaaactttttttaaacaatttttttattagata
ttttcatcatttacattcaatgctatcccaaaagacccttataccctctc
cctccctgcattccaacccatgcactatcactttcctggtcatgtatccc
ctgtattggggcataaaaatctttgcagaacaagggcctctccttcccat
gatggcaatagaacatcttctgcctaccataaggcggctagagacatggc
ttgtgtttaacggggttactg

gaattccagatgttagggaagtgagacatacccaagatccaactgggatg
acatcagctgaagtattcaacagaggagatatagaacctgaagaggccat
ctcagtagatagccatggcctccagttgagacataggcccattcactcat
ctcaaaattcttcacccagaattgctgtcaaatggaaacacaaggacaaa
aagtggaatagagggaaggagaggtcacctagagaccacacatctagaaa
tccatcccttctgcagataccaaactccacactattgttgatgccaagaa
ttacttgctgacagaagcctggtgtagctgtcccctgaggagttttgcca
acatttgactaatacagatgtagatactcaaagaccaccattggactaag
ttcagagaccccagtggaagaggtaggggaatgactgaagaagctgaatg
tgattgtaaccccataggaagaagaataatatcaactaactgcaccaccc
agagactaagccatgaaccaaagagtgtacatggatggattcatgacttt
agctacatctgtagcagaggattgaattatctggcaaccatgggcgagga
gcctcttcatcccatggagaattgaaaccccagaatattgagatgccaga
gcagtgagtcagaagtgggtaatgggtggaggagatcctcttggagacaa
agcagaaagggtatggggtgaggggtttgtagagcagagatcaggaaggg
gaaacaaacacatgaaatgtaagtaaaataaaatattcattattaattat
attattatagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80114644_80115817
seq2: B6Ng01-186A17.b_44_1214 (reverse)

seq1  CAGTACACCCCGTTAAACACAAGCTCATGTCTCTAGCCG-CATAT-GTA-  47
      ||||| |||||||||||||||||| |||||||||||||| | ||| ||| 
seq2  CAGTA-ACCCCGTTAAACACAAGC-CATGTCTCTAGCCGCCTTATGGTAG  48

seq1  GCAGAAGATGGTCTAATTGGCCATCATTGGGAGGAGAGGCCCTTGGTCTT  97
      |||||||||| ||||  | |||||||| || |||||||||||||| || |
seq2  GCAGAAGATGTTCTA--TTGCCATCATGGGAAGGAGAGGCCCTTGTTC-T  95

seq1  GCAAAGA-TTATATGCCCCAATACAGGGGAATACCATGGCCAGG-AAGTG  145
      ||||||| || |||||||||||||||||| ||| |||| ||||| |||||
seq2  GCAAAGATTTTTATGCCCCAATACAGGGG-ATA-CATGACCAGGAAAGTG  143

seq1  ATAGTGCATGGGTTGGAATGCAGGGAGGGAGAGGGTATAAGGGTCTTTTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCATGGGTTGGAATGCAGGGAGGGAGAGGGTATAAGGGTCTTTTG  193

seq1  GGATAGCATTGAATTGTAAATGATGAAAATATCTAATAAAAAAATTGTTT  245
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGATAGCATTGAA-TGTAAATGATGAAAATATCTAATAAAAAAATTGTTT  242

seq1  AAAAAAAGTTTTCATGGTAAACCCATCTTCATATTGAACTTGCAGTGGCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGTTTTCATGGTAAACCCATCTTCATATTGAACTTGCAGTGGCT  292

seq1  TCTGAATAAGAGAGGGTTTAACCACTCTTATTTATAATGAAGTCGATCTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATAAGAGAGGGTTTAACCACTCTTATTTATAATGAAGTCGATCTA  342

seq1  TTTTTATTTCGCTGATATGATAAAAATGAAATGATTTTAATAAAAATGAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTCGCTGATATGATAAAAATGAAATGATTTTAATAAAAATGAT  392

seq1  ACATACTGTCTCATATGTTGCTAATTTTCAGATGGAGAAAAACTAAAAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTGTCTCATATGTTGCTAATTTTCAGATGGAGAAAAACTAAAAGA  442

seq1  AAATTACACATTCCACAAAATCTCTGAGACCCAACACCTGGTACGGAGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACACATTCCACAAAATCTCTGAGACCCAACACCTGGTACGGAGAA  492

seq1  CTAAGAACACTTGGTCATTATTTTCAAGCTAGATTTTTCTTGTTTTAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAACACTTGGTCATTATTTTCAAGCTAGATTTTTCTTGTTTTAAAA  542

seq1  AATTCCAGTAGCAAGAATAATGGTTCTCCACAATGTTGCTAGTATGTTAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAGTAGCAAGAATAATGGTTCTCCACAATGTTGCTAGTATGTTAT  592

seq1  ATTTGTAAAGCAGCGTGTAAGTCTCATGGAAGAGGAATGAGTTCCTTAAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAAAGCAGCGTGTAAGTCTCATGGAAGAGGAATGAGTTCCTTAAG  642

seq1  TGACAGTAAAATAAGCTTTTGTGGAGAGACGTTTAGGGGTGCTATTGTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTAAAATAAGCTTTTGTGGAGAGACGTTTAGGGGTGCTATTGTCC  692

seq1  ATGGGCATTACCTATTTTGTGTTGCAATTTTCACTAATAGAAAAAATTAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCATTACCTATTTTGTGTTGCAATTTTCACTAATAGAAAAAATTAC  742

seq1  AGTAATGGTCACATTTTCAGTCCTGTGTCATAAAATACCCAAGTGGAGTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGTCACATTTTCAGTCCTGTGTCATAAAATACCCAAGTGGAGTC  792

seq1  AAACTAAGTAGAGAAAAATGATAAAATCTTAAGTAAAATTTATACTTATC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGTAGAGAAAAATGATAAAATCTTAAGTAAAATTTATACTTATC  842

seq1  TGGCTATTCTTCTTTACTGAGCATAGTGTTGCATTACACTTGGAGAATAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTCTTCTTTACTGAGCATAGTGTTGCATTACACTTGGAGAATAT  892

seq1  GACCATACGTTCAGTGTGGATGACTGTTCTTAGTTGATTCATTCTGAGCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATACGTTCAGTGTGGATGACTGTTCTTAGTTGATTCATTCTGAGCT  942

seq1  TAATCAATTATTATAATTTCACAAAGTATGCAAAAATGTTTGGCATTCAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAATTATTATAATTTCACAAAGTATGCAAAAATGTTTGGCATTCAG  992

seq1  TTTAAATTATTATTTGACTGTTCTCTTGTATATTCATTTGTATAATGCTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTATTATTTGACTGTTCTCTTGTATATTCATTTGTATAATGCTC  1042

seq1  GGAAGCAAAATTAATCGTTTTAATTTTGTAAAATTTTTTATGAAGATATA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAAAATTAATCGTTTTAATTTTGTAAAATTTTTTATGAAGATATA  1092

seq1  TAAAATCTTCATACATTTTAATTTCATTCTTAAGAGGGAAAACTCCTATG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTTCATACATTTTAATTTCATTCTTAAGAGGGAAAACTCCTATG  1142

seq1  TACCATGTGCACAGAATCAGTATGAATTC  1174
      |||||||||||||||||||||||||||||
seq2  TACCATGTGCACAGAATCAGTATGAATTC  1171


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