BAC Information

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BAC

Clone NameB6Ng01-186L19
Chromosome13 (Build37)
Map Location 64,191,886 - 64,338,096
singlet/doubletdoublet
Overlap geneSlc35d2, Zfp367, Habp4, Cdc14b
Upstream gene2010111I01Rik, Fancc, Ptch1, C030010C08Rik, 0610007P08Rik, 9330134C04Rik, EG665575, Hsd17b3
Downstream gene1110018J18Rik, Ctsl, Ccrk, LOC665612, 1190003K10Rik, LOC218298, Ppia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186L19.bB6Ng01-186L19.g
ACCGA011501GA011502
length892370
definitionB6Ng01-186L19.b B6Ng01-186L19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,191,886 - 64,192,531)(64,337,721 - 64,338,096)
sequence
gaattcaaggacagcctaggctatgttgtgatttaaggacagcctgggct
acttgagactatctgggggaagaaaacaaaaggaaagaaggaagaaaata
ctagaacatagctcaggaccttattgtgatcactaattagtagaccaagt
agacgttctttctcatctctggtttagaagaaatcttttctgcttttccc
catttggtataatattcactgctgggttctcacagacaggtgtcagcgtg
gggaggtctgatcctgctgctcctaattgtggttttcagccctgaaggat
gttgaattttgtcaaaaacatttcttttttttaattaattaatttattat
tatatctaagtacactgtagctgtcttcaaacacaccgtaagagggcatc
agatctcattaaggatggctgtgagccacgatgtggttgctaggatttga
actcagcagtcagtgctcttacccgctgagccatctctccagcccatgtc
aagagcatttctatgtccgttgaaatgattatgcaatttgtcttcattcc
actaccatgctgtattacattaattcatttgaacccactgaattatctca
gcacccctggagtgaaaccttctggctcctgcggttttaccatcttaatc
tgtcgtttactgaggatttttgaatatgtgttcatcagggaaattgtcta
tagcttgtttgtgtgacatcaccacccagttttggcatcagagtggagct
agcttcttgccatgagtttagaagcattcctttccctcccgatttggtgg
gatggtgtgcatttagtagatactggtaacatttcagcacgaaacccaac
tagtacttttgatgttctttgttcaggagacgatttaccctc
cagccctggaaaggcagaagcaggtgggtctttttaaattcgaggctggc
cctggcctgcatagcaagttacaggcaagccaaggtaacatagtgagatc
ctgcctctaaagacagcatcaaaaccaaaatgactaaacatttttagaga
cacgtgtgaagccatcagaaaaaagtcagagaaggaatcaagagtttatt
ttttgttttttgggtttttttgtttttgtttttgttttgtttttttttat
atactgtagcagcgttcagggcttacccccaagtccagctcactcatttt
tactaactggtttctgtagagaggaatatttatttatccatttgtttgct
tgtttatttggggggtggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_64191886_64192531
seq2: B6Ng01-186L19.b_42_687

seq1  GAATTCAAGGACAGCCTAGGCTATGTTGTGATTTAAGGACAGCCTGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGACAGCCTAGGCTATGTTGTGATTTAAGGACAGCCTGGGCT  50

seq1  ACTTGAGACTATCTGGGGGAAGAAAACAAAAGGAAAGAAGGAAGAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGACTATCTGGGGGAAGAAAACAAAAGGAAAGAAGGAAGAAAATA  100

seq1  CTAGAACATAGCTCAGGACCTTATTGTGATCACTAATTAGTAGACCAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACATAGCTCAGGACCTTATTGTGATCACTAATTAGTAGACCAAGT  150

seq1  AGACGTTCTTTCTCATCTCTGGTTTAGAAGAAATCTTTTCTGCTTTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTTCTTTCTCATCTCTGGTTTAGAAGAAATCTTTTCTGCTTTTCCC  200

seq1  CATTTGGTATAATATTCACTGCTGGGTTCTCACAGACAGGTGTCAGCGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGTATAATATTCACTGCTGGGTTCTCACAGACAGGTGTCAGCGTG  250

seq1  GGGAGGTCTGATCCTGCTGCTCCTAATTGTGGTTTTCAGCCCTGAAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTCTGATCCTGCTGCTCCTAATTGTGGTTTTCAGCCCTGAAGGAT  300

seq1  GTTGAATTTTGTCAAAAACATTTCTTTTTTTTAATTAATTAATTTATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATTTTGTCAAAAACATTTCTTTTTTTTAATTAATTAATTTATTAT  350

seq1  TATATCTAAGTACACTGTAGCTGTCTTCAAACACACCGTAAGAGGGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTAAGTACACTGTAGCTGTCTTCAAACACACCGTAAGAGGGCATC  400

seq1  AGATCTCATTAAGGATGGCTGTGAGCCACGATGTGGTTGCTAGGATTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCATTAAGGATGGCTGTGAGCCACGATGTGGTTGCTAGGATTTGA  450

seq1  ACTCAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCTCCAGCCCATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCAGTCAGTGCTCTTACCCGCTGAGCCATCTCTCCAGCCCATGTC  500

seq1  AAGAGCATTTCTATGTCCGTTGAAATGATTATGCAATTTGTCTTCATTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATTTCTATGTCCGTTGAAATGATTATGCAATTTGTCTTCATTCC  550

seq1  ACTACCATGCTGTATTACATTAATTCATTTGAACCCACTGAATTATCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCATGCTGTATTACATTAATTCATTTGAACCCACTGAATTATCTCA  600

seq1  GCACCCCTGGAGTGAAACCTTCTGGCTCCTGCGGTTTTACCATCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCCTGGAGTGAAACCTTCTGGCTCCTGCGGTTTTACCATCTT  646

seq1: chr13_64337721_64338096
seq2: B6Ng01-186L19.g_65_440 (reverse)

seq1  AACCACCCCCCAAATAAACAAGCAAACAAATGGATAAATAAATATTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCCCCCAAATAAACAAGCAAACAAATGGATAAATAAATATTCCTC  50

seq1  TCTACAGAAACCAGTTAGTAAAAATGAGTGAGCTGGACTTGGGGGTAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGAAACCAGTTAGTAAAAATGAGTGAGCTGGACTTGGGGGTAAGC  100

seq1  CCTGAACGCTGCTACAGTATATAAAAAAAAACAAAACAAAAACAAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACGCTGCTACAGTATATAAAAAAAAACAAAACAAAAACAAAAACA  150

seq1  AAAAAACCCAAAAAACAAAAAATAAACTCTTGATTCCTTCTCTGACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCCAAAAAACAAAAAATAAACTCTTGATTCCTTCTCTGACTTTT  200

seq1  TTCTGATGGCTTCACACGTGTCTCTAAAAATGTTTAGTCATTTTGGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGGCTTCACACGTGTCTCTAAAAATGTTTAGTCATTTTGGTTTT  250

seq1  GATGCTGTCTTTAGAGGCAGGATCTCACTATGTTACCTTGGCTTGCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGTCTTTAGAGGCAGGATCTCACTATGTTACCTTGGCTTGCCTGT  300

seq1  AACTTGCTATGCAGGCCAGGGCCAGCCTCGAATTTAAAAAGACCCACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCTATGCAGGCCAGGGCCAGCCTCGAATTTAAAAAGACCCACCTG  350

seq1  CTTCTGCCTTTCCAGGGCTGGAATTC  376
      ||||||||||||||||||||||||||
seq2  CTTCTGCCTTTCCAGGGCTGGAATTC  376