BAC Information

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BAC

Clone NameB6Ng01-186P05
Chromosome13 (Build37)
Map Location 102,963,955 - 102,965,138
singlet/doubletsinglet
Overlap genenone
Upstream gene4933416M06Rik, LOC100039971, LOC100039983, Pik3r1
Downstream geneCd180, Mast4, EG621312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186P05.bB6Ng01-186P05.g
ACCGA011661GA011662
length1,2121,175
definitionB6Ng01-186P05.b B6Ng01-186P05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgacttaggttaggtaaagatcctttcccaatttgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttagctcccatttgtcaattctcgatcttacaacacaagccattgctgtt
ctgttcagaaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtgggagggcatcatcctgagt
gaggtaacacattcacaaaggaactcacacaatatgtactcactgataag
tggatattagcccaaaacctaggatacccaagatataagatacaatttcc
taaacacatgaaactcaagaaaaatgaagactgaagtgtggacactatgc
ccctccttagaagtgggaacaaaacaccctgggaaggagttacagagaca
aagtttggagctgagatgaaaaggatggtccatgtagagactgccatatc
cagggatccaccccataatcagcatcccaaacgctgacaccattgcatac
actagcaagattttatcgaaaggacccagatgtagctgtctcttgtgaga
ctatgccggggcctagcaaacatagaagtggatgctcacagtcagctaat
ggatggatcacagggcttcccaatggaggagctagagaaagtaccaagga
gcttaaagggatctgcacccttatagcggacacatatgaactaccagtaa
tcccggagctctgactctagctgcatatgttatcaaaagaattggctagt
cagaccatcactgtaaagagagaaggtacattgacacgaaccttatatga
ccagtcagtacgtcagccataaacgggagtggtggacatggtgccacaat
cctagcatcact

gaattcatggagttcacaacctgactatcccatgtgttttatattttatt
tacaacatttgaatattacctagtaagacaattacaatgtctgtattttt
aaaaaagaaaaaaggcatagtctccagagaatttttaaaatgtggcaact
ggcttgttctcattctggcaaccagttttgcacatactactctcattata
tgactttatttttctttgacataatctaatggaatcttggagagaataag
ggttacacaattagaaccatgcttgggtagtacctgccaagtcaacaaaa
agtgaataactgattaggaattgtcagtgcttccatgaatttgcatcaag
tgtggtgggctctgaaagtcttcaacctattagtaacttcacttggggat
gagccaatatgtgttttgtctattatgagatagtgtctggactaggaaca
gggtcaaagtgagatggacagagtagaatgtaaaagcttatagcagttat
aaggattctaaaccagactttgctgactcttaaggcaatttctagagcaa
gaaaagaggaaagaaatttggatttagaacaatttcccttagccttagca
acagtgcatgctgatatgagtttggtaatcctaaccctttattttccata
aaatgttcaataagatcattaaataatctgactcttacttcttccttgca
aagagtgaaaacatctatattataatagagtgatgattataccagttatg
ctttaaatatatagcatgaatatataacatatgcacatggcattaaataa
aggacactaaatattaacttataattctcataaaaatagcataattttaa
cttactttgaaagtttaccaggtatatttagaaagcaaattatgaaagat
acctagcaaagctattttccttaagtgaaatagaagaaaatttaccacaa
tataaacatcctaaattatacccaacaaatcaacctaaagaaaaatactg
gaaacaacagttttgggctgaagagaggagtgagcttagcacgaagactg
tgaaggaaacacaaaggccataattattaaaacacaaagaaccactgaaa
acacagtatcaccgatatcgcataccatatttcaacataactgaatgcac
tgaatctcattcacaatccaaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102963955_102965138
seq2: B6Ng01-186P05.g_68_1242 (reverse)

seq1  GTCTTTTGATTGGTGAATTGAGA-TCAGTGCTATTTAAAGTTATTGTTGA  49
      |||||| |||| ||||| ||||| ||||||| |||   ||||| ||||||
seq2  GTCTTTGGATT-GTGAA-TGAGATTCAGTGC-ATT--CAGTTA-TGTTGA  44

seq1  AATATGTGTTAATTGTG-GATATTGTGTGATACTGTGTTTTCAGTGGTCC  98
      ||||||       | || ||||| | |||||||||||||||||||||| |
seq2  AATATG------GTATGCGATATCG-GTGATACTGTGTTTTCAGTGGTTC  87

seq1  TTTGTGTTTTAATAATTATGG-CTTTGTGTTTCTTTCACAGTCTTCGTGC  147
      ||||||||||||||||||||| ||||||||||| ||||||||||||||||
seq2  TTTGTGTTTTAATAATTATGGCCTTTGTGTTTCCTTCACAGTCTTCGTGC  137

seq1  TAAGCTCACTCCTCTCTTCAGCCCAAAACTG-TGTTTCCAGTA-TTTTCT  195
      ||||||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  TAAGCTCACTCCTCTCTTCAGCCCAAAACTGTTGTTTCCAGTATTTTTCT  187

seq1  TTAGGTTTGATTTGTTGGGTAT-ATTTAGGATGTTTATATTGTGGTAAAT  244
      ||||| |||||||||||||||| |||||||||||||||||||||||||||
seq2  TTAGG-TTGATTTGTTGGGTATAATTTAGGATGTTTATATTGTGGTAAAT  236

seq1  TTTCTTTCTATTTCACTTAAGGAAAATAGCTTTGCTAGGTATCTTTCATA  294
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTC-TTCTATTTCACTTAAGGAAAATAGCTTTGCTAGGTATCTTTCATA  285

seq1  ATTTGCTTTCTAAATATACCTGGTAAACTTTCAAAGTAAGTTAAAATTAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTTCTAAATATACCTGGTAAACTTTCAAAGTAAGTTAAAATTAT  335

seq1  GCTATTTTTATGAGAATTATAAGTTAATATTTAGTGTCCTTTATTTAATG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTTATGAGAATTATAAGTTAATATTTAGTGTCCTTTATTTAATG  385

seq1  CCATGTGCATATGTTATATATTCATGCTATATATTTAAAGCATAACTGGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGCATATGTTATATATTCATGCTATATATTTAAAGCATAACTGGT  435

seq1  ATAATCATCACTCTATTATAATATAGATGTTTTCACTCTTTGCAAGGAAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCATCACTCTATTATAATATAGATGTTTTCACTCTTTGCAAGGAAG  485

seq1  AAGTAAGAGTCAGATTATTTAATGATCTTATTGAACATTTTATGGAAAAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAGTCAGATTATTTAATGATCTTATTGAACATTTTATGGAAAAT  535

seq1  AAAGGGTTAGGATTACCAAACTCATATCAGCATGCACTGTTGCTAAGGCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTAGGATTACCAAACTCATATCAGCATGCACTGTTGCTAAGGCT  585

seq1  AAGGGAAATTGTTCTAAATCCAAATTTCTTTCCTCTTTTCTTGCTCTAGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAATTGTTCTAAATCCAAATTTCTTTCCTCTTTTCTTGCTCTAGA  635

seq1  AATTGCCTTAAGAGTCAGCAAAGTCTGGTTTAGAATCCTTATAACTGCTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCTTAAGAGTCAGCAAAGTCTGGTTTAGAATCCTTATAACTGCTA  685

seq1  TAAGCTTTTACATTCTACTCTGTCCATCTCACTTTGACCCTGTTCCTAGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTTTACATTCTACTCTGTCCATCTCACTTTGACCCTGTTCCTAGT  735

seq1  CCAGACACTATCTCATAATAGACAAAACACATATTGGCTCATCCCCAAGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACACTATCTCATAATAGACAAAACACATATTGGCTCATCCCCAAGT  785

seq1  GAAGTTACTAATAGGTTGAAGACTTTCAGAGCCCACCACACTTGATGCAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTACTAATAGGTTGAAGACTTTCAGAGCCCACCACACTTGATGCAA  835

seq1  ATTCATGGAAGCACTGACAATTCCTAATCAGTTATTCACTTTTTGTTGAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGGAAGCACTGACAATTCCTAATCAGTTATTCACTTTTTGTTGAC  885

seq1  TTGGCAGGTACTACCCAAGCATGGTTCTAATTGTGTAACCCTTATTCTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGGTACTACCCAAGCATGGTTCTAATTGTGTAACCCTTATTCTCT  935

seq1  CCAAGATTCCATTAGATTATGTCAAAGAAAAATAAAGTCATATAATGAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATTCCATTAGATTATGTCAAAGAAAAATAAAGTCATATAATGAGA  985

seq1  GTAGTATGTGCAAAACTGGTTGCCAGAATGAGAACAAGCCAGTTGCCACA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATGTGCAAAACTGGTTGCCAGAATGAGAACAAGCCAGTTGCCACA  1035

seq1  TTTTAAAAATTCTCTGGAGACTATGCCTTTTTTCTTTTTTAAAAATACAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATTCTCTGGAGACTATGCCTTTTTTCTTTTTTAAAAATACAG  1085

seq1  ACATTGTAATTGTCTTACTAGGTAATATTCAAATGTTGTAAATAAAATAT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTAATTGTCTTACTAGGTAATATTCAAATGTTGTAAATAAAATAT  1135

seq1  AAAACACATGGGATAGTCAGGTTGTGAACTCCATGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATGGGATAGTCAGGTTGTGAACTCCATGAATTC  1175


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