BAC Information

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BAC

Clone NameB6Ng01-187G11
Chromosome13 (Build37)
Map Location 62,787,072 - 62,787,515
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC624140, EG623505, LOC665415, LOC673332, BC052688, EG638502, LOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978
Downstream geneEG435366, LOC380850, LOC630951, Fbp2, Fbp1, LOC100042090, EG665524, 2010111I01Rik, Fancc, Ptch1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187G11.bB6Ng01-187G11.g
ACCGA011993GA011994
length1,062441
definitionB6Ng01-187G11.b B6Ng01-187G11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtccctccatcttctcttcaactgattcttcccactcctgtcc
caatccaccctgagtccacccacaaaagctgttttatcccctttccaggg
agatccctgcctcctgcctatactcctctttacctaacctctctctcagt
tactgattattatttgcctaatatttactattactattaaatattaatat
ttatattgattattattgcctaatatttaatatccatgtatcactctgtg
tgtttgggttacctcacttagggtgatttttctagttgtatccatttgcc
tgtaattttatgatgtccttatttttagcagctgagtaatactccattgt
gtaaatgtaccacattttctttatccactcctcagtttagggacaactag
gttgattccagtttctgtgaagtatgaataaagcagatatgaacataatg
tggcaagtgtccttatgttcggatggaacaccttttggatatatacccaa
gagtggtatagttaggtcttgagatatatggattttcagttttctgagga
accatgatattgatttgcatagtgactattagttttcatccacacgtgca
tggaagattgtgccccttgttctgcatccttgccagcatgagctgtccat
tgtattattgatcttatctcttctgacagttttttttaaaatggaatctc
aaagtagttttgatttgcatttgcctgatgctaaagatgtttaacattct
taaagggtctctcagccatttgagattcctttgttgagaaatctgtttgg
ctttgtacccctttttaattgattttttttttttttgttctttcaacatc
tagtttattgagttctttttacattttttttttttaatatttggcttcta
tctgttgtgaagttgggaaaaatacttttcccatttcttaagctgtctgt
ccagttgcctgtttttgttgttttgttttgttttacttagaaaagctttc
agtttcaagaggtctgtttattaactgtcatcttagggtcggacctaatg
atgttccatttc
cacagatggagccttaatgtcagaaaaataaagagaccttgcaagccagt
acgtgggaaagagagattgagaaagacctatcatcttcaatatcctttat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatacacacagaagaagtagttctggcctagattaatttttttct
tctcactcaaaacctccagattaaagaagggttttcccatctttttgttt
gtttgttttgttttgtgttttttgagacagggtttctctgtatagccctg
gctgtcctagaactcactttggagaccaggctggcccggaacgcaaaaat
ctgcctgacacagacacattgagacagggattataggcgtgtgttacttt
tttctggctctctttttttattttttattgcctggtctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_62787072_62787515
seq2: B6Ng01-187G11.g_66_512

seq1  GAATTCCACAGATGGAGCCTTAATGTCAGAAAAATAAAGAGACCTTGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGATGGAGCCTTAATGTCAGAAAAATAAAGAGACCTTGCAA  50

seq1  GCCAGTACGTGGGAAAGAGAGATTGAGAAAGACCTATCATCTTCAATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTACGTGGGAAAGAGAGATTGAGAAAGACCTATCATCTTCAATATC  100

seq1  CTT--TATATATATATATATATATATATATATATATATATATATATATAT  148
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATATATATATATATATATATATATATATATATATATATATATAT  150

seq1  ATATATATATATATACTCACAGCAGAAGTAGTTCTGGCCTAGATTAATTT  198
      |||||||||||||||| ||||| |||||||||||||||||||||||||||
seq2  ATATATATATATATACACACAGAAGAAGTAGTTCTGGCCTAGATTAATTT  200

seq1  TTTTCTTCTCAATCAAAACCTCCAGATTAAAGAAGGGTTTTCCCATCTTT  248
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTCACTCAAAACCTCCAGATTAAAGAAGGGTTTTCCCATCTTT  250

seq1  TTGTTTGTTTGTTTTGTTTTGTGTTTTTTGAGACAGGGTTTCTCTGTATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTTGTTTTGTGTTTTTTGAGACAGGGTTTCTCTGTATA  300

seq1  GCCCTGGCTGTCCTAGAACTCACTTTGTAGACCAGGCTGGCCCGGAACTC  348
      ||||||||||||||||||||||||||| |||||||||||||||||||| |
seq2  GCCCTGGCTGTCCTAGAACTCACTTTGGAGACCAGGCTGGCCCGGAACGC  350

seq1  AGAAATCTGCCTGCCTCTGCCTC-CTGAGTGCTGGGATTAAAGGCGTGTG  397
      | ||||||||||| | | | | |  ||||  | ||||||| |||||||||
seq2  AAAAATCTGCCTGACACAGACACATTGAG-ACAGGGATTATAGGCGTGTG  399

seq1  AAAC-CAATCCCGGCTCTCTTTTCAGATTCTTAATTGCCTGGTCTGCA  444
        ||    | | |||||||||||   ||| || |||||||||||||||
seq2  TTACTTTTTTCTGGCTCTCTTTTTTTATTTTTTATTGCCTGGTCTGCA  447