BAC Information

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BAC

Clone NameB6Ng01-189B10
Chromosome13 (Build37)
Map Location 90,448,392 - 90,449,572
singlet/doubletsinglet
Overlap genenone
Upstream geneEdil3, Hapln1, EG667266, Vcan, LOC100042940, Xrcc4, Tmem167, LOC100043170
Downstream geneLOC624190, EG435376, Rps23, Atg10, LOC100042959
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189B10.bB6Ng01-189B10.g
ACCGA013206GA013207
length8371,189
definitionB6Ng01-189B10.b B6Ng01-189B10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatttaactattcagtaacattcaaatttacctctagt
agagactgtgaaaataatccggcattacaatttacttgaataagagctag
aaagctcagagctagtctacattttaactatgtagaacaatacacaggaa
tacacaatggtgtaggaaataggtgggttgtggttttattgaagggatag
tagaacagaattcccctggtgcatgtttttcactaggcccagaggaatag
cataacaatagactagcattgcatcagagctttcacctggctcctgtgtt
tagctgatcttaattaagggttgatcctatctcagttgaaaacacagcct
gactcctgccatcttcttatgtatgaattttctttgttttgtgtaaagaa
ccaatgtaccttggcaggtgtaagtgcttagctttcttgtttttcttctg
tattctaagactggtgctcactttgagacaatacattcagatacacactc
tctctgtatctgtatttgtttgtcatctgcaccaactccttgcttgcctg
taatctgaaccccaagtcttcctgcggatcaaggacccaactgaggtccg
tctgcagcatatgatagtatgcataagtgatccccaaaattctagcatag
aagtcctatagctgataaacacattcagctattgtgactggattaaaaga
aaaaaacttcaaagaaatcagtagtactccctttatacaagtgacaaaca
tgctgaggaaaaagttaggaagacagtacacttttatggtagacaaaaat
aataaaatatcttggcatatctcatacctagtaaagt

gaattcagttgtgacttgaagccaaagtcacatgggctcttctgcctagt
ttctctaagcaagaaataaacttgcaaggtggagctgaagatacattcta
gttctccgcttacattgatggcctatccactagaacatgggacggagcgt
actccttgggatgggcctgtcttctgcagcagcatcttcctttggatgtc
tctggatggcagaggcaagtaaagagtttcaatggtgcaactaattatcg
tgacacatctctcttgctgctttccctgggtctcaggagtctgtgggtga
aggatgggtttcttaggcttgatgaggaagaagaacagcttacatgttac
caacggtgttcctattttaagcttctggaccaactattccctcttttgga
aaccttttccaaatctataacttgataaatcctctggccttctttatttc
tttgctcaaatatcatctcctaagtggaatgcctcctacttgattgctac
cacataggaatgagataaaaagataaagcccgattgcttggcttaccatg
gtaaggaagagttacgtcatccaatgacaatgaagagcagatcattctgc
tatgttgcgtatctcttcggaggcctgagttttcaggattacagaatata
agaagcatgactttcatctgtagacataagatcattccagtgagactgac
tgtttgttgattggcaagtgatctgtgaagggtggctttcagaatccatt
ccttcatgactgactaatttgagatgacagaaactggtgccaattggttg
gtttacaaaaagtgttcattgaagtgagttagcttgattcattgaaagtt
ttttgttctcagacccacaccagagactaaccaatattttctcagcaata
taaaaacactatttctcagtcttaacttccaattctcctttaaactatta
taaccccctattgtaactattaccccttgaatgcaatacatattttacct
taggtggtgcttaaatttactgtatgtctcagatgtaggaatacaaatgt
catggaggcaggtttattatttacttgcttgttctggaatttcaagaaat
ttgccttggcttaccagtgagtacttaacgaaaattggttaagaatgact
attaaatctgatatttcaagtaggaaccggaagtaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_90448392_90449572
seq2: B6Ng01-189B10.g_65_1253

seq1  GAATTCAGTTGTGACTTGAAGCCAAAGTCACATGGGCTCTTCTGCCTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGTGACTTGAAGCCAAAGTCACATGGGCTCTTCTGCCTAGT  50

seq1  TTCTCTAAGCAAGAAATAAACTTGCAAGGTGGAGCTGAAGATACATTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAAGCAAGAAATAAACTTGCAAGGTGGAGCTGAAGATACATTCTA  100

seq1  GTTCTCCGCTTACATTGATGGCCTATCCACTAGAACATGGGACGGAGCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCGCTTACATTGATGGCCTATCCACTAGAACATGGGACGGAGCGT  150

seq1  ACTCCTTGGGATGGGCCTGTCTTCTGCAGCAGCATCTTCCTTTGGATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTGGGATGGGCCTGTCTTCTGCAGCAGCATCTTCCTTTGGATGTC  200

seq1  TCTGGATGGCAGAGGCAAGTAAAGAGTTTCAATGGTGCAACTAATTATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATGGCAGAGGCAAGTAAAGAGTTTCAATGGTGCAACTAATTATCG  250

seq1  TGACACATCTCTCTTGCTGCTTTCCCTGGGTCTCAGGAGTCTGTGGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATCTCTCTTGCTGCTTTCCCTGGGTCTCAGGAGTCTGTGGGTGA  300

seq1  AGGATGGGTTTCTTAGGCTTGATGAGGAAGAAGAACAGCTTACATGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGGTTTCTTAGGCTTGATGAGGAAGAAGAACAGCTTACATGTTAC  350

seq1  CAACGGTGTTCCTATTTTAAGCTTCTGGACCAACTATTCCCTCTTTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGGTGTTCCTATTTTAAGCTTCTGGACCAACTATTCCCTCTTTTGGA  400

seq1  AACCTTTTCCAAATCTATAACTTGATAAATCCTCTGGCCTTCTTTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTCCAAATCTATAACTTGATAAATCCTCTGGCCTTCTTTATTTC  450

seq1  TTTGCTCAAATATCATCTCCTAAGTGGAATGCCTCCTACTTGATTGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCAAATATCATCTCCTAAGTGGAATGCCTCCTACTTGATTGCTAC  500

seq1  CACATAGGAATGAGATAAAAAGATAAAGCCCGATTGCTTGGCTTACCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGGAATGAGATAAAAAGATAAAGCCCGATTGCTTGGCTTACCATG  550

seq1  GTAAGGAAGAGTTACGTCATCCAATGACAATGAAGAGCAGATCATTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGAAGAGTTACGTCATCCAATGACAATGAAGAGCAGATCATTCTGC  600

seq1  TATGTTGCGTATCTCTTCGGAGGCCTGAGTTTTCAGGATTACAGAATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGCGTATCTCTTCGGAGGCCTGAGTTTTCAGGATTACAGAATATA  650

seq1  AGAAGCATGACTTTCATCTGTAGACATAAGATCATTCCAGTGAGACTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCATGACTTTCATCTGTAGACATAAGATCATTCCAGTGAGACTGAC  700

seq1  TGTTTGTTGATTGGCAAGTGATCTGTGAAGGGTGGCTTTCAGAATCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTGATTGGCAAGTGATCTGTGAAGGGTGGCTTTCAGAATCCATT  750

seq1  CCTTCATGACTGACTAATTTGAGATGACAGAAACTGGTGCCAATTGGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATGACTGACTAATTTGAGATGACAGAAACTGGTGCCAATTGGTTG  800

seq1  GTTTACAAAAAGTGTTCATTGAAGTGAGTTAGCTTGATTCATTGAAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAAAAAGTGTTCATTGAAGTGAGTTAGCTTGATTCATTGAAAGTT  850

seq1  TTTTGTTCTCAGACCCACACCAGAGACTAACCAATATTTTCTCAGCAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCTCAGACCCACACCAGAGACTAACCAATATTTTCTCAGCAATA  900

seq1  T-AAAACACTATTTCTCAGTCTTAACTTTCAATTCTCCTTTAAACTATTA  949
      | |||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAAAACACTATTTCTCAGTCTTAACTTCCAATTCTCCTTTAAACTATTA  950

seq1  TAACCCCCTATTGTAACTATTA-CCCTTGAATGCAATACATATTT--ACT  996
      |||||||||||||||||||||| ||||||||||||||||||||||   ||
seq2  TAACCCCCTATTGTAACTATTACCCCTTGAATGCAATACATATTTTACCT  1000

seq1  TAG--TGTGCTTAAAATTTACTGTATGTCTTCAGATGTTAGAATACAAAT  1044
      |||   |||||| |||||||||||||||| ||||||||  ||||||||||
seq2  TAGGTGGTGCTT-AAATTTACTGTATGTC-TCAGATGTAGGAATACAAAT  1048

seq1  GTCAT-GAGGCAGGTTTATTATTTACTTGCTTGTGTCCTGAATTTCAAGA  1093
      ||||| |||||||||||||||||||||||||||| ||  |||||||||||
seq2  GTCATGGAGGCAGGTTTATTATTTACTTGCTTGT-TCTGGAATTTCAAGA  1097

seq1  AATTTGC--TTGCTTA-CAGTGAGTACATAAC--AAATATGTAAGAAATG  1138
      |||||||  | ||||| |||||||||| ||||  ||||  || |  ||||
seq2  AATTTGCCTTGGCTTACCAGTGAGTACTTAACGAAAATTGGTTAAGAATG  1147

seq1  ACTATTTAAACATTGTATATTTCAAGTAGGAACAG--AGTAAGCC  1181
      |||||| || |  || ||||||||||||||||| |  ||||||||
seq2  ACTATTAAATC--TG-ATATTTCAAGTAGGAACCGGAAGTAAGCC  1189


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