BAC Information

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BAC

Clone NameB6Ng01-190P06
Chromosome13 (Build37)
Map Location 116,550,667 - 116,714,833
singlet/doubletdoublet
Overlap genenone
Upstream geneMocs2, Itga2, LOC100040975, Itga1, Pelo, LOC100041023, LOC547402, LOC100041045
Downstream geneEG623174, Isl1, EG668276, Gm280, LOC100041169, Parp8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190P06.bB6Ng01-190P06.g
ACCGA014577GA014578
length1,020233
definitionB6Ng01-190P06.b B6Ng01-190P06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,550,667 - 116,551,670)(116,714,601 - 116,714,833)
sequence
gaattctctctgttgcacagcagaaaaatgcaagcttagactttcagaat
aaaataataagtctttaaaatcattcagctattaaatgaaagacagtggg
tttaaatttagacttgttcagtggcaggaattatcaggagttctttaact
ccaacaattcaatgtttgatggtgggaatcacacggagagaggaataaac
cctttgttctcgtgatacatgcagactaattaagtgcataattttaggat
atatatatatatatatatgtacatatatatatatgtatatgacgctgact
tctctgactctgtgatgcatctttttttattgtctattaacaagtgccac
attcaaagcctttaaattatgaaaccattttcaggcctgttaggtcttta
agtcgttggtacaatgacagggattcatcaacaagtttcatcaaccttta
acttcactctctgtacttcctctgacttagaaatttgagcatggcttgca
gttctccaagcctctttgaccaagtatagagatgtgaatgtttaaacata
aagtgtaaaatgcagttatgtttttaaattacttgcataactatgggagg
gcctctgtttgaagaattgtgttcatacctgctatgaccagtacttgatt
cagtgagcacaattccttctgctttcctggtgcagtggtggcttagcaac
ttcagttttagacccataaatgacagcaatcagctcatggttctttttta
aaaagtgacagaatatgacctctaatcttcattattaagactaaaagcca
aagcaaaaaatccaaccaaccaaccaaccaaccaaccaaaagctgggcgt
ggtggcacacacctttaatcccagcacttgggaggcagaggcaggtggat
tctgagttcaaggccagcctggtctacagagtgagttccaggacagccag
agctacacagagaaaccctgtctcaaaaacaaacaaacaaacaaacaaca
aaaaccacatattaaacaaa

tttaaggagaaaaaataacagttttttattttatttttattttttatttt
ggctggttttgttttgttttgtgattccagcattgttattttgatttgtt
cattttttagcatgatgttttattgtttgggaatttcacatcatgcaccc
aaatcagactccccacttcttccaggtttgcttctattccttttatgacc
tccttttataggaggaggaggaggaggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_116550667_116551670
seq2: B6Ng01-190P06.b_47_1048

seq1  GAATTCTCTCTGTTGCACAGCAGAAAAATGCAAGCTTAGACTTTCAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTTGCACAGCAGAAAAATGCAAGCTTAGACTTTCAGAAT  50

seq1  AAAATAATAAGTCTTTAAAATCATTCAGCTATTAAATGAAAGACAGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAAGTCTTTAAAATCATTCAGCTATTAAATGAAAGACAGTGGG  100

seq1  TTTAAATTTAGACTTGTTCAGTGGCAGGAATTATCAGGAGTTCTTTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTAGACTTGTTCAGTGGCAGGAATTATCAGGAGTTCTTTAACT  150

seq1  CCAACAATTCAATGTTTGATGGTGGGAATCACACGGAGAGAGGAATAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAATTCAATGTTTGATGGTGGGAATCACACGGAGAGAGGAATAAAC  200

seq1  CCTTTGTTCTCGTGATACATGCAGACTAATTAAGTGCATAATTTTAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTTCTCGTGATACATGCAGACTAATTAAGTGCATAATTTTAGGAT  250

seq1  ATATATATATATATATATGTACATATATATATATGTATATGACGCTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATGTACATATATATATATGTATATGACGCTGACT  300

seq1  TCTCTGACTCTGTGATGCATCTTTTTTTATTGTCTATTAACAAGTGCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACTCTGTGATGCATCTTTTTTTATTGTCTATTAACAAGTGCCAC  350

seq1  ATTCAAAGCCTTTAAATTATGAAACCATTTTCAGGCCTGTTAGGTCTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAGCCTTTAAATTATGAAACCATTTTCAGGCCTGTTAGGTCTTTA  400

seq1  AGTCGTTGGTACAATGACAGGGATTCATCAACAAGTTTCATCAACCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTTGGTACAATGACAGGGATTCATCAACAAGTTTCATCAACCTTTA  450

seq1  ACTTCACTCTCTGTACTTCCTCTGACTTAGAAATTTGAGCATGGCTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTCTCTGTACTTCCTCTGACTTAGAAATTTGAGCATGGCTTGCA  500

seq1  GTTCTCCAAGCCTCTTTGACCAAGTATAGAGATGTGAATGTTTAAACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAAGCCTCTTTGACCAAGTATAGAGATGTGAATGTTTAAACATA  550

seq1  AAGTGTAAAATGCAGTTATGTTTTTAAATTACTTGCATAACTATGGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAAATGCAGTTATGTTTTTAAATTACTTGCATAACTATGGGAGG  600

seq1  GCCTCTGTTTGAAGAATTGTGTTCATACCTGCTATGACCAGTACTTGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTTTGAAGAATTGTGTTCATACCTGCTATGACCAGTACTTGATT  650

seq1  CAGTGAGCACAATTCCTTCTGCTTTCCTGGTGCAGTGGTGGCTTAGCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCACAATTCCTTCTGCTTTCCTGGTGCAGTGGTGGCTTAGCAAC  700

seq1  TTCAGTTTTAGACCCATAAATGACAGCAATCAGCTCATGGTTCTTTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTTAGACCCATAAATGACAGCAATCAGCTCATGGTTCTTTTTTA  750

seq1  AAAAGTGACAGAATATGACCTCTAATCTTCATTATTAAGACTAAAAGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGACAGAATATGACCTCTAATCTTCATTATTAAGACTAAAAGCCA  800

seq1  AAGCAAAAAATCCAACCAACCAACCAACCAACCAACCAAAAGCTGGGCGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAAATCCAACCAACCAACCAACCAACCAACCAAAAGCTGGGCGT  850

seq1  GGTGGCACACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGTGGCACACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGA-  899

seq1  TTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCA  949

seq1  GAGCTACACAGAGAAACCCTGTCTCAAAAAAACAAAACAAAACAAACAAA  1000
      |||||||||||||||||||||||||||||| | | ||  |||||||| ||
seq2  GAGCTACACAGAGAAACCCTGTCTCAAAAACAAACAAACAAACAAAC-AA  998

seq1  CAAA  1004
      ||||
seq2  CAAA  1002


seq1: chr13_116714601_116714833
seq2: B6Ng01-190P06.g_69_301 (reverse)

seq1  CCTCCTCCTCCTCCTCCTCCTCCTATAAAAGGAGGTCATAAAAGGAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCCTCCTCCTCCTCCTATAAAAGGAGGTCATAAAAGGAATAG  50

seq1  AAGCAAACCTGGAAGAAGTGGGGAGTCTGATTTGGGTGCATGATGTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACCTGGAAGAAGTGGGGAGTCTGATTTGGGTGCATGATGTGAAA  100

seq1  TTCCCAAACAATAAAACATCATGCTAAAAAATGAACAAATCAAAATAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAACAATAAAACATCATGCTAAAAAATGAACAAATCAAAATAACA  150

seq1  ATGCTGGAATCACAAAACAAAACAAAACCAGCCAAAATAAAAAATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGAATCACAAAACAAAACAAAACCAGCCAAAATAAAAAATAAAAA  200

seq1  TAAAATAAAAAACTGTTATTTTTTCTCCTTAAA  233
      |||||||||||||||||||||||||||||||||
seq2  TAAAATAAAAAACTGTTATTTTTTCTCCTTAAA  233


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