BAC Information

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BAC

Clone NameB6Ng01-191B05
Chromosome13 (Build37)
Map Location 120,145,371 - 120,146,515
singlet/doubletsinglet
Overlap geneNnt
Upstream geneMrps30, LOC668309, LOC100041278, Fgf10, LOC100041298, LOC100041757
Downstream genePaip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191B05.bB6Ng01-191B05.g
ACCGA014669GA014670
length1,1471,182
definitionB6Ng01-191B05.b B6Ng01-191B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatggatcagactctcacaggtgttgattttgctctttaggcca
tgaaccgctccctggctaatgtcattcttggaggctatggcacaacgtca
acagctggtggaaaacccatggaaatttctggcacacatacagaaatcaa
cctggacaacgcagttgagatgatccgggaagctaacagcattgttatta
ctccaggtaaaaaaataaataagtaaaagtaaaaaactaaacaacctatc
atggttgttttgattgattatattgataggacaaaggtacatggaaacct
cctcattaaaggtttagtttagttcgttggggatttcatgcaggcttggg
tcatactcatcgccagtccttccaagacccattccttctctattcaccat
cctttctttttcctacccaagtcttggtggatgtgggtcctccactggag
catgattggcttatcaggggtcccctctccagcggctacctgttgccaat
aactccggtgctaggagcgggatgatcagtacccacctcccatctccatg
ttgggatttggtctgacttggacttgcgtaggcaggctttacgtgtgctg
tggcagccactgtgaatttgtatgtgcagctgccttgctgtgcccagaag
taagtttccttatagtcattcatcacttctgactcctactgatactttct
gctgcttctgccatggtccctgagccttgggaggagaggctgcagtcagt
atgttctatttcactgggcattctgccgtctcttattctctgtgcctcta
gcagttgtgagtcactctgttaatgatgaggcaagtagaagcgtcacaga
tgagggctgagagatacattgatctatggggataaagatacgtctttaga
agtcagtttaatactatgtccctttagcggctttagttggagtaagtgtt
cctctagggcctatggcctgtctagccataggatctccttatttttggaa
acaatggagacagtagccatgggatggttccatgaatgagaatgcgagcc
actcctcagttaggtcaatagtttagaataacataatagtcttacaatgg
atggagcagaatcttagccatcattttggagctctgtctacatggca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggatttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaca
cagaagtggatgctcacagtcagctaatgatggatcatagggctcccaat
ggaggagctagaagaaagtagccaagagctaaagggatctgcaaccctta
taggtggaacacattatgagctacagtaccccgagctctgacctctagct
gcatatatatcaaaagatggctagtcgcatcacttgaaagagaagtccat
ggacctgcaacttaattgcccagtacgaatcaggccaataggatggttag
atcatgggcagatgcgtgtctcagtcctcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_120145371_120146515
seq2: B6Ng01-191B05.b_45_1191 (reverse)

seq1  TGCCATGTAGACAGAAGCT-CAAAATGATGGCT-AGAATCTGCTCCATCA  48
      |||||||||||||| |||| ||||||||||||| ||| ||||||||||| 
seq2  TGCCATGTAGACAG-AGCTCCAAAATGATGGCTAAGATTCTGCTCCATCC  49

seq1  ATTGGTAGACTATTTATGTTATTCTAAACTATTGACCTAACTGA-GAGTG  97
      ||||  |||||| ||||||||||||||||||||||||||||||| |||||
seq2  ATTGTAAGACTA-TTATGTTATTCTAAACTATTGACCTAACTGAGGAGTG  98

seq1  CCTCGCATTCTCATTCATGG-ACCATCCCATGGCTACTGTCTCCATTGTT  146
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCTCGCATTCTCATTCATGGAACCATCCCATGGCTACTGTCTCCATTGTT  148

seq1  TCCAAAAATAAGGAGATCCCTATGGCTAGACAGGCCATAGGCCCTAGAGG  196
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCAAAAATAAGGAGAT-CCTATGGCTAGACAGGCCATAGGCCCTAGAGG  197

seq1  AACACTTACTCCAACT-AAGCCGCTAAAGGGACATAGTATTAAACTGACT  245
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACACTTACTCCAACTAAAGCCGCTAAAGGGACATAGTATTAAACTGACT  247

seq1  TCTAAAGACGTATCTTTATCCCCATAGATCAATGTATCTCTCAGCCCTCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGACGTATCTTTATCCCCATAGATCAATGTATCTCTCAGCCCTCA  297

seq1  TCTGTGACGCTTCTACTTGCCTCATCATTAACAGAGTGACTCACAACTGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACGCTTCTACTTGCCTCATCATTAACAGAGTGACTCACAACTGC  347

seq1  TAGAGGCACAGAGAATAAGAGACGGCAGAATGCCCAGTGAAATAGAACAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCACAGAGAATAAGAGACGGCAGAATGCCCAGTGAAATAGAACAT  397

seq1  ACTGACTGCAGCCTCTCCTCCCAAGGCTCAGGGACCATGGCAGAAGCAGC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTGCAGCCTCTCCTCCCAAGGCTCAGGGACCATGGCAGAAGCAGC  447

seq1  AGAAAGTATCAGTAGGAGTCAGAAGTGATGAATGACTATAAGGAAACTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTATCAGTAGGAGTCAGAAGTGATGAATGACTATAAGGAAACTTA  497

seq1  CTTCTGGGCACAGCAAGGCAGCTGCACATACAAATTCACAGTGGCTGCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGCACAGCAAGGCAGCTGCACATACAAATTCACAGTGGCTGCCA  547

seq1  CAGCACACGTAAAGCCTGCCTACGCAAGTCCAAGTCAGACCAAATCCCAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACACGTAAAGCCTGCCTACGCAAGTCCAAGTCAGACCAAATCCCAA  597

seq1  CATGGAGATGGGAGGTGGGTACTGATCATCCCGCTCCTAGCACCGGAGTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGATGGGAGGTGGGTACTGATCATCCCGCTCCTAGCACCGGAGTT  647

seq1  ATTGGCAACAGGTAGCCGCTGGAGAGGGGACCCCTGATAAGCCAATCATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCAACAGGTAGCCGCTGGAGAGGGGACCCCTGATAAGCCAATCATG  697

seq1  CTCCAGTGGAGGACCCACATCCACCAAGACTTGGGTAGGAAAAAGAAAGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTGGAGGACCCACATCCACCAAGACTTGGGTAGGAAAAAGAAAGG  747

seq1  ATGGTGAATAGAGAAGGAATGGGTCTTGGAAGGACTGGCGATGAGTATGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAATAGAGAAGGAATGGGTCTTGGAAGGACTGGCGATGAGTATGA  797

seq1  CCCAAGCCTGCATGAAATCCCCAACGAACTAAACTAAACCTTTAATGAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGCCTGCATGAAATCCCCAACGAACTAAACTAAACCTTTAATGAGG  847

seq1  AGGTTTCCATGTACCTTTGTCCTATCAATATAATCAATCAAAACAACCAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCCATGTACCTTTGTCCTATCAATATAATCAATCAAAACAACCAT  897

seq1  GATAGGTTGTTTAGTTTTTTACTTTTACTTATTTATTTTTTTACCTGGAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGTTGTTTAGTTTTTTACTTTTACTTATTTATTTTTTTACCTGGAG  947

seq1  TAATAACAATGCTGTTAGCTTCCCGGATCATCTCAACTGCGTTGTCCAGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACAATGCTGTTAGCTTCCCGGATCATCTCAACTGCGTTGTCCAGG  997

seq1  TTGATTTCTGTATGTGTGCCAGAAATTTCCATGGGTTTTCCACCAGCTGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCTGTATGTGTGCCAGAAATTTCCATGGGTTTTCCACCAGCTGT  1047

seq1  TGACGTTGTGCCATAGCCTCCAAGAATGACATTAGCCAGGGAGCGGTTCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTTGTGCCATAGCCTCCAAGAATGACATTAGCCAGGGAGCGGTTCA  1097

seq1  TGGCCTAAAGAGCAAAATCAACACCTGTGAGAGTCTGATCCATGGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAAAGAGCAAAATCAACACCTGTGAGAGTCTGATCCATGGAATTC  1147