BAC Information

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BAC

Clone NameB6Ng01-191D18
Chromosome13 (Build37)
Map Location 7,659,213 - 7,793,447
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039532, LOC667611, EG623516
Downstream geneLOC791083, LOC382722, Adarb2, EG666941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191D18.bB6Ng01-191D18.g
ACCGA014780GA014781
length1,1931,120
definitionB6Ng01-191D18.b B6Ng01-191D18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,792,271 - 7,793,447)(7,659,213 - 7,660,347)
sequence
gaattcaactggggtattttccagctcatattggcttgtggcaatatctt
tgaggaattgtcttgaggtttgattgatataagagggcagaaagcaatga
agtggaagtttctggtttcatcatgtgatgcagattcatgtggtattttg
ctaagacaagacccatgcgagaatatgtgatgtttagggcacaacagaca
gtgacaggatgcctgcatagccagctgtgcaactctttgttgttctcatg
tctttgttgatcttcacttcattgaagcagagaactcctggcattccagg
tggtcctggtcactcctgctgactctgtatagatttggtgaagacctggc
agtttctgctggattgtgttgctgctgacactttcaactgttggtatcct
gacaacagagatcagaatcacccaaaagaactacttctaaacaggtccat
atccccttgtcctacttaccatcttttctccactacattttgcagtgggc
taaaagtgggtggaggcatttgagtactcatattaaagtacattttgaaa
aatctaagcttatgcccaatgtgggcagtgccatccatagtaagtgctgc
caggctaggtaataaaggtaatgagcataaacttgcaaacaaaccagtaa
gcagctttccctctggttccaccctgaggatttcattctgaaagtgtaag
atgaaataaagccttttctctccatatttattttggtcagagtgttttaa
cacaataacagaaaagcaaactagaattctggggtttattttcctgaggg
ataagacacatacataattttttttctgaacaagagccatatggaccaga
gaacccttgcctgaaccctcacatacttccagatctgagaaaattaaatg
cttatttcattatggtcccatctttttatgggtggtctgttatattggaa
aacacacatggataagtaatgtcaatatttaagttatgagctatctaatt
tctcacccatggtgattattattaaaacacaggattattctttcccaaag
acttacttagtgaagagtgtgattatggttatccttcaggatttattctg
gggcagccttctgagaacaggtttctctattgttgccttggccttttcta
gaatcagcatgagaatgatgattcagagttcctcgtgcctctg

gaattccattaccatagttaaatttcagcacattttgttagatatttacc
atttttcttttcttttaagaattaatatccttaatttatatagtgaaact
cagatctcaaataatgtaattaaaattgagaatccatatttattcccagc
tctttcctattgctctgatctttctcaagtgtatctatacatcataggag
ggaaacatacactctctaaaactcttcatgggacctctaccaacctatga
ttgataactatctaaatatgtagaatgtttggaacttataccaggaaatt
cctgaagaacatgtttaagaagagattctatgaataaatagttgtagaag
gaaagaagatagtaagatttgatcacatcatttacagagaaggggtctta
ggatatcccagggtaaatctcataggacaaattacttatggtattttaat
tttggttagtgtagtagaatctgtgtctagtatatccaaagagaaattaa
tctgggtgttagaaattactttctataagtgcaaaaagtaatccaaagta
tttgatgggaatgctttatcgtggtggcatgtctggattgggtttctttc
atgcagaccttcctgagtatacgtttgcatagggctttccactaaccttg
agaaatgctttcgttgttatttaatgtaagtagagaacatagggaaggaa
tattctagttaagctagattttttctgattaaaaaaaacagggcttctga
gtaacatggctagtgaaagatgtttacagtcaattgaaagatgggtatct
gacagaatgatgcacccacacagatgagaactagatgaagtattgagttg
attttaaagctacaacacatcagtctgaaggaggcctagcttaaagtatt
gatagagaaattgttactcatattccccatcctacaaagatagggctggg
tcatatttaaagaagttgcagtaataccatttcaaagcaggtcatcaaat
atgtgtctatagcatgatattttttaggaaacacaaaggactcatatagc
gttataaaaacataatataagcacaatctacagtttagaaaaaaagagac
tattgtatgaccagtaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7792271_7793447
seq2: B6Ng01-191D18.b_41_1233 (reverse)

seq1  CAGAGGCA-GAGGAACCTTGTGAATTCATCATCTTCATGCTGATTTCTAG  49
      |||||||| |||||||  | |||| |||||||  ||||||||| ||||||
seq2  CAGAGGCACGAGGAAC--TCTGAA-TCATCATTCTCATGCTGA-TTCTAG  46

seq1  AAAA-GCAAGGGCAAC-ATAGAGAAACCCTGTCTCAGAAAGCTGCCCCAG  97
      |||| || | |||||| |||||||||||   |||||||| ||||||||||
seq2  AAAAGGCCAAGGCAACAATAGAGAAACCTGTTCTCAGAAGGCTGCCCCAG  96

seq1  AATAAAT-CTGAAGATTAACCATAATCACACTCTTCACT-AGT-AGTCTT  144
      ||||||| ||||||  ||||||||||||||||||||||| ||| ||||||
seq2  AATAAATCCTGAAGGATAACCATAATCACACTCTTCACTAAGTAAGTCTT  146

seq1  TGG--AAG-ATAATTCTGTG-TTTAAT-ATAATCA-CAT-GGTGAGGAAT  187
      |||  ||| ||||| ||||| |||||| ||||||| ||| |||||| |||
seq2  TGGGAAAGAATAATCCTGTGTTTTAATAATAATCACCATGGGTGAGAAAT  196

seq1  TAGATAGCTCATAACTTAAATATTGACATTACTTATCCATGTGTGTTTTC  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCTCATAACTTAAATATTGACATTACTTATCCATGTGTGTTTTC  246

seq1  C-ATATAACAGACCA-CCAT-AAAAGATGGGACCATAATG-AATAAGCAT  283
      | ||||||||||||| |||| ||||||||||||||||||| |||||||||
seq2  CAATATAACAGACCACCCATAAAAAGATGGGACCATAATGAAATAAGCAT  296

seq1  TTAATTTTCTCAGATCT-GAAGTATGTGA-GGTTCAGGCAAGGGTTCTCT  331
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  TTAATTTTCTCAGATCTGGAAGTATGTGAGGGTTCAGGCAAGGGTTCTCT  346

seq1  GGTCCATATGGCTCTTGTTCAG-AAAAAAATTATGTATGTGTCTTATCCC  380
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGTCCATATGGCTCTTGTTCAGAAAAAAAATTATGTATGTGTCTTATCCC  396

seq1  TCAGGAAAATAAACCCCAGAATTCTAGTTTGCTTTTCTGTTATTGTGTTA  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAATAAACCCCAGAATTCTAGTTTGCTTTTCTGTTATTGTGTTA  446

seq1  AAACACTCTGACCAAAATAAATATGGAGAGAAAAGGCTTTATTTCATCTT  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTCTGACCAAAATAAATATGGAGAGAAAAGGCTTTATTTCATCTT  496

seq1  ACACTTTCAGAATGAAATCCTCAGGGTGGAACCAGAGGGAAAGCTGCTTA  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCAGAATGAAATCCTCAGGGTGGAACCAGAGGGAAAGCTGCTTA  546

seq1  CTGGTTTGTTTGCAAGTTTATGCTCATTACCTTTATTACCTAGCCTGGCA  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGTTTGCAAGTTTATGCTCATTACCTTTATTACCTAGCCTGGCA  596

seq1  GCACTTACTATGGATGGCACTGCCCACATTGGGCATAAGCTTAGATTTTT  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTACTATGGATGGCACTGCCCACATTGGGCATAAGCTTAGATTTTT  646

seq1  CAAAATGTACTTTAATATGAGTACTCAAATGCCTCCACCCACTTTTAGCC  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTACTTTAATATGAGTACTCAAATGCCTCCACCCACTTTTAGCC  696

seq1  CACTGCAAAATGTAGTGGAGAAAAGATGGTAAGTAGGACAAGGGGATATG  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAAAATGTAGTGGAGAAAAGATGGTAAGTAGGACAAGGGGATATG  746

seq1  GACCTGTTTAGAAGTAGTTCTTTTGGGTGATTCTGATCTCTGTTGTCAGG  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTTTAGAAGTAGTTCTTTTGGGTGATTCTGATCTCTGTTGTCAGG  796

seq1  ATACCAACAGTTGAAAGTGTCAGCAGCAACACAATCCAGCAGAAACTGCC  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAACAGTTGAAAGTGTCAGCAGCAACACAATCCAGCAGAAACTGCC  846

seq1  AGGTCTTCACCAAATCTATACAGAGTCAGCAGGAGTGACCAGGACCACCT  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTCACCAAATCTATACAGAGTCAGCAGGAGTGACCAGGACCACCT  896

seq1  GGAATGCCAGGAGTTCTCTGCTTCAATGAAGTGAAGATCAACAAAGACAT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCCAGGAGTTCTCTGCTTCAATGAAGTGAAGATCAACAAAGACAT  946

seq1  GAGAACAACAAAGAGTTGCACAGCTGGCTATGCAGGCATCCTGTCACTGT  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAACAAAGAGTTGCACAGCTGGCTATGCAGGCATCCTGTCACTGT  996

seq1  CTGTTGTGCCCTAAACATCACATATTCTCGCATGGGTCTTGTCTTAGCAA  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGCCCTAAACATCACATATTCTCGCATGGGTCTTGTCTTAGCAA  1046

seq1  AATACCACATGAATCTGCATCACATGATGAAACCAGAAACTTCCACTTCA  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCACATGAATCTGCATCACATGATGAAACCAGAAACTTCCACTTCA  1096

seq1  TTGCTTTCTGCCCTCTTATATCAATCAAACCTCAAGACAATTCCTCAAAG  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCTGCCCTCTTATATCAATCAAACCTCAAGACAATTCCTCAAAG  1146

seq1  ATATTGCCACAAGCCAATATGAGCTGGAAAATACCCCAGTTGAATTC  1177
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCCACAAGCCAATATGAGCTGGAAAATACCCCAGTTGAATTC  1193


seq1: chr13_7659213_7660347
seq2: B6Ng01-191D18.g_64_1183

seq1  GAATTCCATTACCATAGTTAAATTTCAGCACATTTTGTTAGATATTTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTACCATAGTTAAATTTCAGCACATTTTGTTAGATATTTACC  50

seq1  ATTTTTCTTTTCTTTTAAGAATTAATATCCTTAATTTATATAGTGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTTTCTTTTAAGAATTAATATCCTTAATTTATATAGTGAAACT  100

seq1  CAGATCTCAAATAATGTAATTAAAATTGAGAATCCATATTTATTCCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTCAAATAATGTAATTAAAATTGAGAATCCATATTTATTCCCAGC  150

seq1  TCTTTCCTATTGCTCTGATCTTTCTCAAGTGTATCTATACATCATAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTATTGCTCTGATCTTTCTCAAGTGTATCTATACATCATAGGAG  200

seq1  GGAAACATACACTCTCTAAAACTCTTCATGGGACCTCTACCAACCTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATACACTCTCTAAAACTCTTCATGGGACCTCTACCAACCTATGA  250

seq1  TTGATAACTATCTAAATATGTAGAATGTTTGGAACTTATACCAGGAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAACTATCTAAATATGTAGAATGTTTGGAACTTATACCAGGAAATT  300

seq1  CCTGAAGAACATGTTTAAGAAGAGATTCTATGAATAAATAGTTGTAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGAACATGTTTAAGAAGAGATTCTATGAATAAATAGTTGTAGAAG  350

seq1  GAAAGAAGATAGTAAGATTTGATCACATCATTTACAGAGAAGGGGTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGATAGTAAGATTTGATCACATCATTTACAGAGAAGGGGTCTTA  400

seq1  GGATATCCCAGGGTAAATCTCATAGGACAAATTACTTATGGTATTTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCCCAGGGTAAATCTCATAGGACAAATTACTTATGGTATTTTAAT  450

seq1  TTTGGTTAGTGTAGTAGAATCTGTGTCTAGTATATCCAAAGAGAAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTAGTGTAGTAGAATCTGTGTCTAGTATATCCAAAGAGAAATTAA  500

seq1  TCTGGGTGTTAGAAATTACTTTCTATAAGTGCAAAAAGTAATCCAAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGTTAGAAATTACTTTCTATAAGTGCAAAAAGTAATCCAAAGTA  550

seq1  TTTGATGGGAATGCTTTATCGTGGTGGCATGTCTGGATTGGGTTTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGGAATGCTTTATCGTGGTGGCATGTCTGGATTGGGTTTCTTTC  600

seq1  ATGCAGACCTTCCTGAGTATACGTTTGCATAGGGCTTTCCACTAACCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGACCTTCCTGAGTATACGTTTGCATAGGGCTTTCCACTAACCTTG  650

seq1  AGAAATGCTTTCGTTGTTATTTAATGTAAGTAGAGAACATAGGGAAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCTTTCGTTGTTATTTAATGTAAGTAGAGAACATAGGGAAGGAA  700

seq1  TATTCTAGTTAAGCTAGATTTTTTCTGATTAAAAAAAACAGGGCTTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAGTTAAGCTAGATTTTTTCTGATTAAAAAAAACAGGGCTTCTGA  750

seq1  GTAACATGGCTAGTGAAAGATGTTTACAGTCAATTGAAAGATGGGTATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACATGGCTAGTGAAAGATGTTTACAGTCAATTGAAAGATGGGTATCT  800

seq1  GACAGAATGATGCACCCACACAGATGAGAACTAGATGAAGTATTGAGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAATGATGCACCCACACAGATGAGAACTAGATGAAGTATTGAGTTG  850

seq1  ATTTTAAAGCTACAACACATCAGTCTGAAGGAGGCCTAGCTTAAAGTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGCTACAACACATCAGTCTGAAGGAGGCCTAGCTTAAAGTATT  900

seq1  GATAGAGAAATTGTTACTCATATTCCCCATCCTACAAAGATAGGGCTGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGAAATTGTTACTCATATTCCCCATCCTACAAAGATAGGGCTGGG  950

seq1  TCATATTTAAAGAAGTTGCAGTAATACCA-TTCAAAGCAGGTCATCAAAT  999
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCATATTTAAAGAAGTTGCAGTAATACCATTTCAAAGCAGGTCATCAAAT  1000

seq1  ATGTGTCTATTAGCATTGGATA-TTTTTAGGAAACACAAAGGACTCATAT  1048
      ||||||||| ||||||  |||| |||||||||||||||||||||||||||
seq2  ATGTGTCTA-TAGCAT--GATATTTTTTAGGAAACACAAAGGACTCATAT  1047

seq1  AGCGGTTTATTAAAACATAATATTTAAGCACAAAATCTACAGTTTTAAGA  1098
      ||||  |||| |||||||||||  |||||||  ||||||||||||    |
seq2  AGCG--TTATAAAAACATAATA--TAAGCAC--AATCTACAGTTT----A  1087

seq1  GAAAAAAAGAGGACCTATTGTATGAACCAGTAAGGAT  1135
      |||||||||||   |||||||||| |||||| |||||
seq2  GAAAAAAAGAG--ACTATTGTATG-ACCAGT-AGGAT  1120


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