BAC Information

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BAC

Clone NameB6Ng01-191I07
Chromosome13 (Build37)
Map Location 104,622,184 - 104,745,140
singlet/doubletdoublet
Overlap geneErbb2ip, LOC100040086, D130037M23Rik
Upstream geneMast4, EG621312, EG432800, LOC432801, LOC100040045, Ppia-ps13_1282.1, Sfrs12
Downstream geneNln, Sgtb, 2410002O22Rik, LOC100040518, Trim23, Ppwd1, Cenpk, Adamts6, LOC667518, Sdccag10, 3110031B13Rik, A930021C24Rik, EG238836, Rgs7bp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191I07.bB6Ng01-191I07.g
ACCGA014989GA014990
length1,2151,106
definitionB6Ng01-191I07.b B6Ng01-191I07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,622,184 - 104,623,384)(104,744,037 - 104,745,140)
sequence
gaattcctaacagccacttacacaaaccccttatttacagtgactgtaag
aatattcagacagaaacaaattctaaggatgtcgactctacttcaaaagt
ctcttgagttcatcctgtatctcaataaactgataaatacttcattcatt
cttactcatgtctctgaaacagcccctttgacaatacctttttccttcta
aaatccatttctacatgtgcaatacatgtttattgtaaattagaaccatg
ctcctactctcagcttaagaaaatttaaaattcccaacaaaatgaacata
gcctcaacagtgtgctatagggttacagcaaagagaaaagatgaagtagc
tacagctcacagaaattagctgaaatgtaacaatgtcagttactggatag
aaggtagtaatcacattttatgcattttttttctcaaaaatatttaagga
atttaaaaataatagattagatatgttcagctgcatttaaaatttatcat
ataattaataagtaaagaaattataatttaaaaataaaatccatatatat
atgtgtgtgtgtgtgtgctgagtcttaataaaaaagtatttgggaggggg
tgggcagggaaacaaggtctcactgtgtagcacaggctggcttcaaactg
gtggtgttcctgcagcctcccacatgctgcagttacaggtgtcatggtgc
catgcctggctgaaagagtgttttttatacatttgggccatgtagcaatg
tagtaagatgaactttacaggattttgtttgttaattcctttcaaaagac
acaatttaccaataatgttatgaagaacacaagcattagttattttacca
acatgtccatttgtagtacagccacaaaacactcaactgacttgttcaag
tacaccagaaatgcaatctagcaatgtcaagagcaatgccatgccagagt
catctgtgtcagtgatgatgttagttcatttaatacaaactggagggaaa
aagttgttttgatgaaatatttacaccttagaaaatacattttctgttat
tttagtaattatataactaaactgctattttcttacaatatttaacataa
tcatggtagttggagcagaaagcaatgaccatttgaattgtattaacata
ctgtatgtgtgtgtatcatagctcagagacattactagcatgttcatgcg
aagaccttgagagag
gaattcaataagataatgttcacaagccaagctctagtagcatgttttca
taaactatccttttctatcattcctgtcagttcagtccccatttgtaaag
tatgacaatcttatttttcaacacacaattaaacactgttcctttctccc
gaatgtaattgatttcagcgttcactcattccagagcctgtgctaacttc
tggagctacaatcattagtttgtggcaatgtcactgtttgcataaagttg
aggatcttgaataggaaccgggtagcaaaacactgcacagtgaagcaggg
gacaatgggaagaagcgccaccgtgtgcgcggtggcacagggcatggtct
cttgacctgggctgagagctttggtgaggctccggaagatgccataccag
agacaacagaatagatgagacttagctaggtgatgccggggctacaaact
gttccagaaaggtcataatgagtcccaagaaaggaaatgctggagtagag
aatgggagagcacccagagatgacgatgagtggccagaagctacagaaag
actctgtaagccatataaagaagtcttcccttctccctgaagacatgcaa
aggcctgattggccatgacgtgaccacattgctggcccaactgtggagga
gatcctcttgggaaaaaatgaggaggggtgggtaagatcgtgttcttgga
caaggctgtgcttgtggtcagcagaacaagggtgctggctttcatctgtc
atcctcatgggaaacccaggcaggaaagtgtaagtttgaagtccacctta
actacatagtgagaccctgtctcacaaagaaaaaagaaaaaaaaaagcat
atatctttcccctggatgttgataaagtcaagggtaaaatgatatcattt
taatttaagcaattattttagcaagacaaaatggtatgaagtttccacca
aaaaggtagtacccaaaaggtaggacatggaacatttctgcctcccacta
gagtgcctacctctttagctttctttctagcattattaccaggccatagt
ccctgacatgagtacgtccccattgatgaatgtgtcttgatatgtcatgg
gcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_104622184_104623384
seq2: B6Ng01-191I07.b_44_1258

seq1  GAATTCCTAACAGCCACTTACACAAACCCCTTATTTACAGTGACTGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACAGCCACTTACACAAACCCCTTATTTACAGTGACTGTAAG  50

seq1  AATATTCAGACAGAAACAAATTCTAAGGATGTCGACTCTACTTCAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAGACAGAAACAAATTCTAAGGATGTCGACTCTACTTCAAAAGT  100

seq1  CTCTTGAGTTCATCCTGTATCTCAATAAACTGATAAATACTTCATTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGTTCATCCTGTATCTCAATAAACTGATAAATACTTCATTCATT  150

seq1  CTTACTCATGTCTCTGAAACAGCCCCTTTGACAATACCTTTTTCCTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCATGTCTCTGAAACAGCCCCTTTGACAATACCTTTTTCCTTCTA  200

seq1  AAATCCATTTCTACATGTGCAATACATGTTTATTGTAAATTAGAACCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATTTCTACATGTGCAATACATGTTTATTGTAAATTAGAACCATG  250

seq1  CTCCTACTCTCAGCTTAAGAAAATTTAAAATTCCCAACAAAATGAACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACTCTCAGCTTAAGAAAATTTAAAATTCCCAACAAAATGAACATA  300

seq1  GCCTCAACAGTGTGCTATAGGGTTACAGCAAAGAGAAAAGATGAAGTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAACAGTGTGCTATAGGGTTACAGCAAAGAGAAAAGATGAAGTAGC  350

seq1  TACAGCTCACAGAAATTAGCTGAAATGTAACAATGTCAGTTACTGGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTCACAGAAATTAGCTGAAATGTAACAATGTCAGTTACTGGATAG  400

seq1  AAGGTAGTAATCACATTTTATGCATTTTTTTTCTCAAAAATATTTAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGTAATCACATTTTATGCATTTTTTTTCTCAAAAATATTTAAGGA  450

seq1  ATTTAAAAATAATAGATTAGATATGTTCAGCTGCATTTAAAATTTATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAATAATAGATTAGATATGTTCAGCTGCATTTAAAATTTATCAT  500

seq1  ATAATTAATAAGTAAAGAAATTATAATTTAAAAATAAAATCCATATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAATAAGTAAAGAAATTATAATTTAAAAATAAAATCCATATATAT  550

seq1  ATGTGTGTGTGTGTGTGCTGAGTCTTAATAAAAAAGTATTTGGGAGGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGTGTGTGTGCTGAGTCTTAATAAAAAAGTATTTGGGAGGGGG  600

seq1  TGGGCAGGGAAACAAGGTCTCACTGTGTAGCACAGGCTGGCTTCAAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGGGAAACAAGGTCTCACTGTGTAGCACAGGCTGGCTTCAAACTG  650

seq1  GTGGTGTTCCTGCAGCCTCCCACATGCTGCAGTTACAGGTGTCATGGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTTCCTGCAGCCTCCCACATGCTGCAGTTACAGGTGTCATGGTGC  700

seq1  CATGCCTGGCTGAAAGAGTGTTTTTTATACATTTGGGCCATGTAGCAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGGCTGAAAGAGTGTTTTTTATACATTTGGGCCATGTAGCAATG  750

seq1  TAGTAAGATGAACTTTACAGGATTTTGTTTGTTAATTCCTTTCAAAAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGATGAACTTTACAGGATTTTGTTTGTTAATTCCTTTCAAAAGAC  800

seq1  ACAATTTACCAATAATGTTATGAAGAACACAAGCATTAGTTATTTTACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTACCAATAATGTTATGAAGAACACAAGCATTAGTTATTTTACCA  850

seq1  ACATGTCCATTTGTAGTACAGCCACAAAACACTCAACTGACTTGTTCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCCATTTGTAGTACAGCCACAAAACACTCAACTGACTTGTTCAAG  900

seq1  TACACCAGAAATGCAATCTAGCAATGTCAAGAGCAATGCCATGCCAGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCAGAAATGCAATCTAGCAATGTCAAGAGCAATGCCATGCCAGAGT  950

seq1  CATCTGTGTCAGTGATGATGTTAGTTCATTTAATACAAACTGGAGGGAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATCTGTGTCAGTGATGATGTTAGTTCATTTAATACAAACTGGAGGG-AA  999

seq1  AAAGTTGTTTTGATGAAATATTTACA-CTTAG-AAATACATTTTCTGTTA  1048
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  AAAGTTGTTTTGATGAAATATTTACACCTTAGAAAATACATTTTCTGTTA  1049

seq1  TTTTAGTAATTATAT-ACTAAACTGCTATTTTCTTACAATATTT-ACATA  1096
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  TTTTAGTAATTATATAACTAAACTGCTATTTTCTTACAATATTTAACATA  1099

seq1  ATCAATGGTAGT--GAGCAGAAAGCAATGAACA--TAGATGGTAT--ACA  1140
      ||| ||||||||  |||||||||||||||| ||  |  || ||||  |||
seq2  ATC-ATGGTAGTTGGAGCAGAAAGCAATGACCATTTGAATTGTATTAACA  1148

seq1  TACTGTATGTGTG----TACTAGCTACAAGAGACA-TACAAGCATGTCCA  1185
      |||||||||||||    |  |||||   ||||||| ||| ||||||| ||
seq2  TACTGTATGTGTGTGTATCATAGCT--CAGAGACATTACTAGCATGTTCA  1196

seq1  T-CGAAGA-CTTGA-AGAG  1201
      | |||||| ||||| ||||
seq2  TGCGAAGACCTTGAGAGAG  1215

seq1: chr13_104744037_104745140
seq2: B6Ng01-191I07.g_68_1173 (reverse)

seq1  AGCTGCCCATGACATATCAAGACAACATTCATCAATGGGGACGTACTTCA  50
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  AGCTGCCCATGACATATCAAGAC-ACATTCATCAATGGGGACGTAC-TCA  48

seq1  TGTCAGGGACCTATGG-CTGGTAATAATTGCCTAGAAAGGAAGCTTAAAG  99
      ||||||||| |||||| |||||||||||   |||||||| |||| |||||
seq2  TGTCAGGGA-CTATGGCCTGGTAATAAT--GCTAGAAAGAAAGC-TAAAG  94

seq1  AGGTAGGCACTCTAGTGGGAGGCAG-AATG-TCCATGTCCTACCTTTT-G  146
      ||||||||||||||||||||||||| |||| ||||||||||||||||| |
seq2  AGGTAGGCACTCTAGTGGGAGGCAGAAATGTTCCATGTCCTACCTTTTGG  144

seq1  GTACTACC-TTTTGGTGGAAACTTCATACCA-TGTGTCTTGCT-AAATAA  193
      |||||||| |||||||||||||||||||||| | ||||||||| ||||||
seq2  GTACTACCTTTTTGGTGGAAACTTCATACCATTTTGTCTTGCTAAAATAA  194

seq1  TTGCTT-AATTAAAATGATATCATTTTACCCTTGACTTTATCAACATCCA  242
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAAATTAAAATGATATCATTTTACCCTTGACTTTATCAACATCCA  244

seq1  GGGGAAAGATATATGCTTTTTTTTTTCTTTTTTCTTTGTGAGACAGGGTC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAGATATATGCTTTTTTTTTTCTTTTTTCTTTGTGAGACAGGGTC  294

seq1  TCACTATGTAGTTAAGGTGGACTTCAAACTTACACTTTCCTGCCTGGGTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGTAGTTAAGGTGGACTTCAAACTTACACTTTCCTGCCTGGGTT  344

seq1  TCCCATGAGGATGACAGATGAAAGCCAGCACCCTTGTTCTGCTGACCACA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGAGGATGACAGATGAAAGCCAGCACCCTTGTTCTGCTGACCACA  394

seq1  AGCACAGCCTTGTCCAAGAACACGATCTTACCCACCCCTCCTCATTTTTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGCCTTGTCCAAGAACACGATCTTACCCACCCCTCCTCATTTTTT  444

seq1  CCCAAGAGGATCTCCTCCACAGTTGGGCCAGCAATGTGGTCACGTCATGG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGAGGATCTCCTCCACAGTTGGGCCAGCAATGTGGTCACGTCATGG  494

seq1  CCAATCAGGCCTTTGCATGTCTTCAGGGAGAAGGGAAGACTTCTTTATAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAGGCCTTTGCATGTCTTCAGGGAGAAGGGAAGACTTCTTTATAT  544

seq1  GGCTTACAGAGTCTTTCTGTAGCTTCTGGCCACTCATCGTCATCTCTGGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACAGAGTCTTTCTGTAGCTTCTGGCCACTCATCGTCATCTCTGGG  594

seq1  TGCTCTCCCATTCTCTACTCCAGCATTTCCTTTCTTGGGACTCATTATGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCCCATTCTCTACTCCAGCATTTCCTTTCTTGGGACTCATTATGA  644

seq1  CCTTTCTGGAACAGTTTGTAGCCCCGGCATCACCTAGCTAAGTCTCATCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTGGAACAGTTTGTAGCCCCGGCATCACCTAGCTAAGTCTCATCT  694

seq1  ATTCTGTTGTCTCTGGTATGGCATCTTCCGGAGCCTCACCAAAGCTCTCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTGTCTCTGGTATGGCATCTTCCGGAGCCTCACCAAAGCTCTCA  744

seq1  GCCCAGGTCAAGAGACCATGCCCTGTGCCACCGCGCACACGGTGGCGCTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGTCAAGAGACCATGCCCTGTGCCACCGCGCACACGGTGGCGCTT  794

seq1  CTTCCCATTGTCCCCTGCTTCACTGTGCAGTGTTTTGCTACCCGGTTCCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCATTGTCCCCTGCTTCACTGTGCAGTGTTTTGCTACCCGGTTCCT  844

seq1  ATTCAAGATCCTCAACTTTATGCAAACAGTGACATTGCCACAAACTAATG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGATCCTCAACTTTATGCAAACAGTGACATTGCCACAAACTAATG  894

seq1  ATTGTAGCTCCAGAAGTTAGCACAGGCTCTGGAATGAGTGAACGCTGAAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGCTCCAGAAGTTAGCACAGGCTCTGGAATGAGTGAACGCTGAAA  944

seq1  TCAATTACATTCGGGAGAAAGGAACAGTGTTTAATTGTGTGTTGAAAAAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACATTCGGGAGAAAGGAACAGTGTTTAATTGTGTGTTGAAAAAT  994

seq1  AAGATTGTCATACTTTACAAATGGGGACTGAACTGACAGGAATGATAGAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGTCATACTTTACAAATGGGGACTGAACTGACAGGAATGATAGAA  1044

seq1  AAGGATAGTTTATGAAAACATGCTACTAGAGCTTGGCTTGTGAACATTAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAGTTTATGAAAACATGCTACTAGAGCTTGGCTTGTGAACATTAT  1094

seq1  CTTATTGAATTC  1104
      ||||||||||||
seq2  CTTATTGAATTC  1106