BAC Information

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BAC

Clone NameB6Ng01-193D08
Chromosome13 (Build37)
Map Location 118,192,893 - 118,305,337
singlet/doubletdoublet
Overlap geneLOC382807
Upstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365
Downstream geneHcn1, LOC100041695, LOC674926, Mrps30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193D08.bB6Ng01-193D08.g
ACCGA016245GA016246
length285885
definitionB6Ng01-193D08.b B6Ng01-193D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,305,053 - 118,305,337)(118,192,893 - 118,193,775)
sequence
catgtttcaagtgtacatttatttcatgtttcagttgggtttgttttttt
ttaatattttgagggtttgcttttgtttagtttactatatgactgctttt
tgagagagacagaaacagagagagacagaggcaaagaaagaaacagagag
aaataaaagacagaacaggaagttaagtgggtggggatgaagtgggaagt
gtttgggggaaaaatataataaattaagttgtttgaaaatagttttaatt
tttttatgtttctgagattataatctcaccatttt

gaattctgttgttatatagatatatttatattttttcccctgagagtctt
atattgcatcttagaatgcaagaaacagaagccgatcttgaatagcacgg
aatcagtttatctcattctattgtccaagaggtcacaatccagccaagta
caaaggaaaggacagactccattgtttagtgaaggaggctcttggtgatt
ggagagaaggaattgatggggacttaggaaggtgagagtaaactaataaa
tttacaggttgtaagcaatgttagtttgcaaatgagatttacatatctga
gaaacatagtgagtcttcaggttacctctgctccatctaagcaggcttcg
agaagtcggagtactagaatagtccaaaattggattgatgattttcacat
aacttgaaacatgtgctgtttattattcctaagttttaggtgctagtaga
attttgttactattatttgtttttccacttattccaaataaaacttaaga
tttgtaaacatttatttattgatatgtattgattgtgtgtatgcatgtgt
atgtgcatatatgtatatttgagtgtgtgtatgcataagtatatatgtat
gtgcatgtgtatgtatgtatgtgtgtgttatcttattgctttgttactct
atgttttcatataatgttgaatgtcttttcatgttagttttccttttggc
ttcttgtgtgtatgtgtctatgtgtgtgtgtgtttagggatctgttcagg
ttgtttatctatttctttcctttttgcttatttttaaaattaggttattt
tctttctgttgtgctttaagagctcttatgaaatgtggattctaattgta
tattaatgagtttttaaaaatcatccagttcataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118305053_118305337
seq2: B6Ng01-193D08.b_52_336 (reverse)

seq1  AAAATGGTGTGATTATAATCTCAGAAACATAAAAAAATTAAAACTATTTT  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTGAGATTATAATCTCAGAAACATAAAAAAATTAAAACTATTTT  50

seq1  CAAACAACTTAATTTATTATATTTTTCCCCCAAACACTTCCCACTTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACTTAATTTATTATATTTTTCCCCCAAACACTTCCCACTTCATC  100

seq1  CCCACCCACTTAACTTCCTGTTCTGTCTTTTATTTCTCTCTGTTTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCACTTAACTTCCTGTTCTGTCTTTTATTTCTCTCTGTTTCTTTC  150

seq1  TTTGCCTCTGTCTCTCTCTGTTTCTGTCTCTCTCAAAAAGCAGTCATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTGTCTCTCTCTGTTTCTGTCTCTCTCAAAAAGCAGTCATATA  200

seq1  GTAAACTAAACAAAAGCAAACCCTCAAAATATTAAAAAAAAACAAACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTAAACAAAAGCAAACCCTCAAAATATTAAAAAAAAACAAACCCA  250

seq1  ACTGAAACATGAAATAAATGTACACTTGAAACATG  285
      |||||||||||||||||||||||||||||||||||
seq2  ACTGAAACATGAAATAAATGTACACTTGAAACATG  285


seq1: chr13_118192893_118193775
seq2: B6Ng01-193D08.g_63_947

seq1  GAATTCTGTTGTTATATAGATATATTTATATTTTTTCCCCTGAGAGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGTTATATAGATATATTTATATTTTTTCCCCTGAGAGTCTT  50

seq1  ATATTGCATCTTAGAATGCAAGAAACAGAAGCCGATCTTGAATAGCACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGCATCTTAGAATGCAAGAAACAGAAGCCGATCTTGAATAGCACGG  100

seq1  AATCAGTTTATCTCATTCTATTGTCCAAGAGGTCACAATCCAGCCAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTTATCTCATTCTATTGTCCAAGAGGTCACAATCCAGCCAAGTA  150

seq1  CAAAGGAAAGGACAGACTCCATTGTTTAGTGAAGGAGGCTCTTGGTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAAGGACAGACTCCATTGTTTAGTGAAGGAGGCTCTTGGTGATT  200

seq1  GGAGAGAAGGAATTGATGGGGACTTAGGAAGGTGAGAGTAAACTAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAAGGAATTGATGGGGACTTAGGAAGGTGAGAGTAAACTAATAAA  250

seq1  TTTACAGGTTGTAAGCAATGTTAGTTTGCAAATGAGATTTACATATCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGGTTGTAAGCAATGTTAGTTTGCAAATGAGATTTACATATCTGA  300

seq1  GAAACATAGTGAGTCTTCAGGTTACCTCTGCTCCATCTAAGCAGGCTTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATAGTGAGTCTTCAGGTTACCTCTGCTCCATCTAAGCAGGCTTCG  350

seq1  AGAAGTCGGAGTACTAGAATAGTCCAAAATTGGATTGATGATTTTCACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCGGAGTACTAGAATAGTCCAAAATTGGATTGATGATTTTCACAT  400

seq1  AACTTGAAACATGTGCTGTTTATTATTCCTAAGTTTTAGGTGCTAGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAAACATGTGCTGTTTATTATTCCTAAGTTTTAGGTGCTAGTAGA  450

seq1  ATTTTGTTACTATTATTTGTTTTTCCACTTATTCCAAATAAAACTTAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTACTATTATTTGTTTTTCCACTTATTCCAAATAAAACTTAAGA  500

seq1  TTTGTAAACATTTATTTATTGATATGTATTGATTGTGTGTATGCATGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAACATTTATTTATTGATATGTATTGATTGTGTGTATGCATGTGT  550

seq1  ATGTGCATATATGTATATTTGAGTGTGTGTATGCATAAGTATATATGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATATATGTATATTTGAGTGTGTGTATGCATAAGTATATATGTAT  600

seq1  GTGCATGTGTATGTATGTATGTGTGTGTTATCTTATTGCTTTGTTACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTGTATGTATGTATGTGTGTGTTATCTTATTGCTTTGTTACTCT  650

seq1  ATGTTTTCATATAATGTTGAATGTCTTTTCATGTTAGTTTTCCTTTTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCATATAATGTTGAATGTCTTTTCATGTTAGTTTTCCTTTTGGC  700

seq1  TTCTTGTGTGTATGTGTCTATGTGTGTGTGTGTTTAGGGATCTGTTCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTGTATGTGTCTATGTGTGTGTGTGTTTAGGGATCTGTTCAGG  750

seq1  TTGTTTATCTATTTCTTTCC-TTTTGCTTA-TTTTAAAATTAGGTTA-TT  797
      |||||||||||||||||||| ||||||||| |||||||||||||||| ||
seq2  TTGTTTATCTATTTCTTTCCTTTTTGCTTATTTTTAAAATTAGGTTATTT  800

seq1  TCTTTCTGTTGTGCTTTAAGAGCTCTTATGAAATGTGGATACTAATTGTA  847
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTTTCTGTTGTGCTTTAAGAGCTCTTATGAAATGTGGATTCTAATTGTA  850

seq1  TATTAAATGAGTTTTAAAAAATCATCCAGTTCATAA  883
      |||| |||||||||| ||||||||||||||||||||
seq2  TATT-AATGAGTTTTTAAAAATCATCCAGTTCATAA  885


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