BAC Information

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BAC

Clone NameB6Ng01-193J07
Chromosome13 (Build37)
Map Location 117,344,060 - 117,566,298
singlet/doubletdoublet
Overlap geneLOC100041169
Upstream geneLOC100041045, EG623174, Isl1, EG668276, Gm280
Downstream geneParp8, LOC668288, LOC623312, Emb, EG623365, LOC382807, Hcn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193J07.bB6Ng01-193J07.g
ACCGA016514GA016515
length2461,152
definitionB6Ng01-193J07.b B6Ng01-193J07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,566,053 - 117,566,298)(117,344,060 - 117,345,228)
sequence
tctagctgacactgtcaataatctcaggaaaacttttaaggatggttaca
aactccatcagtagaaatgatatgcctttccttctaatggatcagtaaaa
aacaagcaagcaacatagaaaggatgtgagtttggctattccttagagat
gttaataggggcagatcttactaccttaaaaatattatcgcctcagtata
ggggaacgccagggccaagaagtgagagtgggtgggtaggggagtg

gaattcatgcaggaaacagtaaatgcactctttaaatattagcaaaggca
gataagataaaatgaaaaaacataacttgttatgagaaacagaaactgac
tttgaccaattggtagaaaaaaattaatggagaagttcaaggatttttct
atttctttcctatttatttgtcttcccagtatgtattccatatagtattg
agaccagaaaattattgtatgtgctcctcgcacagtgcagaatcggtgct
tattgggactttgtctagtctgttatgtgctacagactcatcacctagag
catccgggacacaggcagagctcagtgcttgtgagtaaaatgcatgataa
gagtaacactcatggtcttgaggggcattgatgattccaaagaagatgca
acaaatgagataaaagatacaatgaatttagaagaaagatattgattaaa
ttgtgtctttaataattttcaaacttccttgattaaaaaagttctattct
aacaatataaattatcttgaagtgttattatacttaaatggcttattcaa
aagtcagtggttattttcttattttaaaattcaaatatagccttaggaga
taccctactagttatgaaaaatttcatgtattttaatttgttttataaat
gcctgatatgatagttcataccagtattcctagcattcaagaagccgagc
catgaggattgacatataggttgccacaggggtgtggttatactgatatc
caagctagtctggggtaagcaatgagatcctatctcaagacaggacatga
caccacacacacacacacacacacacagaggattagcctttttcctccta
acgattaataagttccatctatcctcttctcccaattttaccttagttca
aaataagatggagatgagctcaaggactcggctcctctccttccatgact
acagaaatagtagtaagaaattcagaagaaataaattaagaaaacagata
atcaggagtagacccacagctactgtgggggtgggaagtttcctctataa
aaattcaatgtaatatgaattgagtcagagtattaagcggaggatgctga
gtctagcttggccacatagtacgcaagttccaataaacctcgaaagaatt
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_117566053_117566298
seq2: B6Ng01-193J07.b_52_297 (reverse)

seq1  CACTCCCCTACCCACCCACTCTCACTTCTTGGCCCTGGCGTTCCCCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCCTACCCACCCACTCTCACTTCTTGGCCCTGGCGTTCCCCTATA  50

seq1  CTGAGGCGATAATATTTTTAAGGTAGTAAGATCTGCCCCTATTAACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCGATAATATTTTTAAGGTAGTAAGATCTGCCCCTATTAACATCT  100

seq1  CTAAGGAATAGCCAAACTCACATCCTTTCTATGTTGCTTGCTTGTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAATAGCCAAACTCACATCCTTTCTATGTTGCTTGCTTGTTTTTT  150

seq1  ACTGATCCATTAGAAGGAAAGGCATATCATTTCTACTGATGGAGTTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCCATTAGAAGGAAAGGCATATCATTTCTACTGATGGAGTTTGTA  200

seq1  ACCATCCTTAAAAGTTTTCCTGAGATTATTGACAGTGTCAGCTAGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCTTAAAAGTTTTCCTGAGATTATTGACAGTGTCAGCTAGA  246


seq1: chr13_117344060_117345228
seq2: B6Ng01-193J07.g_68_1219

seq1  GAATTCATGCAGGAAACAGTAAATGCACTCTTTAAATATTAGCAAAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCAGGAAACAGTAAATGCACTCTTTAAATATTAGCAAAGGCA  50

seq1  GATAAGATAAAATGAAAAAACATAACTTGTTATGAGAAACAGAAACTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGATAAAATGAAAAAACATAACTTGTTATGAGAAACAGAAACTGAC  100

seq1  TTTGACCAATTGGTAGAAAAAAATTAATGGAGAAGTTCAAGGATTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCAATTGGTAGAAAAAAATTAATGGAGAAGTTCAAGGATTTTTCT  150

seq1  ATTTCTTTCCTATTTATTTGTCTTCCCAGTATGTATTCCATATAGTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCCTATTTATTTGTCTTCCCAGTATGTATTCCATATAGTATTG  200

seq1  AGACCAGAAAATTATTGTATGTGCTCCTCGCACAGTGCAGAATCGGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGAAAATTATTGTATGTGCTCCTCGCACAGTGCAGAATCGGTGCT  250

seq1  TATTGGGACTTTGTCTAGTCTGTTATGTGCTACAGACTCATCACCTAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGACTTTGTCTAGTCTGTTATGTGCTACAGACTCATCACCTAGAG  300

seq1  CATCCGGGACACAGGCAGAGCTCAGTGCTTGTGAGTAAAATGCATGATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGGGACACAGGCAGAGCTCAGTGCTTGTGAGTAAAATGCATGATAA  350

seq1  GAGTAACACTCATGGTCTTGAGGGGCATTGATGATTCCAAAGAAGATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACACTCATGGTCTTGAGGGGCATTGATGATTCCAAAGAAGATGCA  400

seq1  ACAAATGAGATAAAAGATACAATGAATTTAGAAGAAAGATATTGATTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGAGATAAAAGATACAATGAATTTAGAAGAAAGATATTGATTAAA  450

seq1  TTGTGTCTTTAATAATTTTCAAACTTCCTTGATTAAAAAAGTTCTATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTTTAATAATTTTCAAACTTCCTTGATTAAAAAAGTTCTATTCT  500

seq1  AACAATATAAATTATCTTGAAGTGTTATTATACTTAAATGGCTTATTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATAAATTATCTTGAAGTGTTATTATACTTAAATGGCTTATTCAA  550

seq1  AAGTCAGTGGTTATTTTCTTATTTTAAAATTCAAATATAGCCTTAGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTGGTTATTTTCTTATTTTAAAATTCAAATATAGCCTTAGGAGA  600

seq1  TACCCTACTAGTTATGAAAAATTTCATGTATTTTAATTTGTTTTATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTACTAGTTATGAAAAATTTCATGTATTTTAATTTGTTTTATAAAT  650

seq1  GCCTGATATGATAGTTCATACCAGTATTCCTAGCATTCAAGAAGCCGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATATGATAGTTCATACCAGTATTCCTAGCATTCAAGAAGCCGAGC  700

seq1  CATGAGGATTGACATATAGGTTGCCACAGGGGTGTGGTTATACTGATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGATTGACATATAGGTTGCCACAGGGGTGTGGTTATACTGATATC  750

seq1  CAAGCTAGTCTGGGGTAAGCAATGAGATCCTATCTCAAGACAGGACATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGTCTGGGGTAAGCAATGAGATCCTATCTCAAGACAGGACATGA  800

seq1  CACCACACACACACACACACACACACAGAGGATTAGCCTTTTT-CTCCTA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACCACACACACACACACACACACACAGAGGATTAGCCTTTTTCCTCCTA  850

seq1  ACGATTAATAAGTTCCATCTATCCTCTTCTCCCAATTTTACCTTAGTTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATTAATAAGTTCCATCTATCCTCTTCTCCCAATTTTACCTTAGTTCA  900

seq1  AAATAAAGATGAAGATGAGCTCAAGGACTC-GCTCCTCTCCTTCCAATGA  948
      |||| |||||| |||||||||||||||||| |||||||||||||| ||| 
seq2  AAAT-AAGATGGAGATGAGCTCAAGGACTCGGCTCCTCTCCTTCC-ATG-  947

seq1  ACTACAGAAATAGTAGTAAGAAATTCAGAAGAAAATACATTAGGAAAACA  998
      ||||||||||||||||||||||||||||||| ||||| |||| |||||||
seq2  ACTACAGAAATAGTAGTAAGAAATTCAGAAG-AAATAAATTAAGAAAACA  996

seq1  GATAAATCAGGAGTAGGAACCACAGCTACATGTGGGGTGGGAAAGTTTCC  1048
      ||| ||||||||||| || |||||||||| |||||||  || ||||||||
seq2  GAT-AATCAGGAGTA-GACCCACAGCTAC-TGTGGGGGTGGGAAGTTTCC  1043

seq1  TCTATAAAAATCAAATG-GATATGAA-TGAGTCACAGAGTAATAAAAGCG  1096
      |||||||||||  ||||  ||||||| |||||  ||||||| |  |||||
seq2  TCTATAAAAATTCAATGTAATATGAATTGAGT--CAGAGTATT--AAGCG  1089

seq1  GAGGATGCTGAAGTCCTAAGCCTTGCCACATAAGTACAGCAAAGTTTTCC  1146
      |||||||||| ||||   ||| | ||||||| ||||| ||||    ||||
seq2  GAGGATGCTG-AGTC--TAGCTTGGCCACAT-AGTAC-GCAA---GTTCC  1131

seq1  AATAAAACCTTCGAAAGGATTCA  1169
      ||||||  | ||||||| |||||
seq2  AATAAA--CCTCGAAAGAATTCA  1152


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