BAC Information

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BAC

Clone NameB6Ng01-194N14
Chromosome13 (Build37)
Map Location 8,759,413 - 8,760,530
singlet/doubletsinglet
Overlap geneAdarb2
Upstream geneLOC791083, LOC382722, EG666941
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c, LOC666986, Zmynd11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194N14.bB6Ng01-194N14.g
ACCGA017430GA017431
length1,1081,200
definitionB6Ng01-194N14.b B6Ng01-194N14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaatgctacaagacaattttaagaaactacagcttgtccaaa
gagacatcatgggaaatgctttttttcaatagttgactgtcttgcaagat
acctgtcagggtgaatgtaaaataaaggagatgggaggaaggaggcagag
ggtccctgaatctcttcaatgaaaagagacttactaaaattatctaagtg
aaccctgccacgtgcttagaagcagaggtcaggaaaagacaatcttccaa
gaagcaggaaaacacaaagaggtactaagaaggaagaatgaaaggccagg
gtacattgattatctgaagcagaaaggtagcaacatcaggattccacatc
tataccatgttgggtcatatatgtgctgcccctgacctgcagaaacccaa
cccactccagaagtagccagccaccaaatctggcatagcatctggtgtac
aaggaataatacatgggacataacatctaatgtgggtgaatccctgaaag
ggtaagtggcaaaagcttatggacttttctcacttcgtatccacaaaagc
atcccaatactgttttaggctgccctgcattttaactactgatttagtct
tgaaagtgctcagagacaccccatctgaagtttctacaggagtgaagcat
aagtaggtggcatttctctattagtcaccctgaaaacaaatacagtcaaa
tgagtccaaaagaatcttgttagaatctaaagaggacattcaggcatctt
agccagcttggctgtttcttatctatctgatttatccccaaaaagtcccc
tccccaagaatctctttgatctttacagtctttgttttcaaatcctctgt
cttctatctacatccattgagcctcactcctaaagtccaatagaagtcag
cattatctttatctgtcgccaaaacacatgttgctttcctattgggggag
atagcacgttagggtttcctgcctggctcctcagtcagacgccagcgtct
gatcattggtgaagccctcccactgatccagcccacgtaaggccacgagg
acatgtagcacgctcatcacttgcagcaaagatttccacatgtataatat
cgagttat
gaattccttacaaccccatgggacaaggaatagttgaacgtgctcatcgc
accttaaaaaattggctttttaaaacaaaagaggggcagctatatccccc
aaggtcaccaaaggcccaccttgccttcaccttatttgtcctaaatttct
tgcacaccgatatcaagggccagtctgcagtggatcgccactggcatcca
gttatttctaattcttatgcattggtaaaatggaaggaccccctgattaa
tgaatggaaggatccagatccagttctaatttggggtaggggctcagttt
gtgttttttcacgagatgaagatggagcgcggtggctgccagagagatta
attcgtcagatgaacacagattctgactcctctggtaagtatcattctaa
agactaaaattccttttgtgcttagaattcagctgagagcgaaagctccc
aaagctgttttccagctactctctgagccagctcccgacaggaggccgga
gactagcctcagctttacaatttgcatttgaataaagtacctagacttcc
ccgaaagaagttctgctttcctactttctcactgtctttcaagattttgt
ctttcaagcaggtaaatcaacattctcaaagcggaccagcggatgtgcat
ccccacccccctagagcacacaggtggctgctgttatctcctttccaagg
acatttccagcacgtggctttcagtctgagttaaaaatttaggttttcct
agagggctagaagagtagatatttctatattaataaagattggtttttta
ttttgatagacaggcttagccccttagctgacctctggcttttcaccctt
gctgttactgcaaggtgtccttaggctgtggaaaaaacagggatgaggag
gaacgacttccagctcctattttagccacaaatcgtggtgttacttaccg
acataattcttgcttaggctttgctaattctgagttgataattctccttt
aagagctgcacagcactcaagaacctgtgcatactggttttgtgattgta
caatcagtatgggccatcactttgctgcagaagtactgccaaggtagtct
gctgaaccatttctgagttctgtgaaaataaacccgtctaagagttgtat
catattttggttaatcaaatatttttcggctctggtcctatgcctctaca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8759413_8760530
seq2: B6Ng01-194N14.b_47_1154

seq1  GAATTCTTTAATGCTACAAGACAATTTTAAGAAACTACAGCTTGTCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAATGCTACAAGACAATTTTAAGAAACTACAGCTTGTCCAAA  50

seq1  GAGACATCATGGGAAATGCTTTTTTTCAATAGTTGACTGTCTTGCAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATCATGGGAAATGCTTTTTTTCAATAGTTGACTGTCTTGCAAGAT  100

seq1  ACCTGTCAGGGTGAATGTAAAATAAAGGAGATGGGAGGAAGGAGGCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCAGGGTGAATGTAAAATAAAGGAGATGGGAGGAAGGAGGCAGAG  150

seq1  GGTCCCTGAATCTCTTCAATGAAAAGAGACTTACTAAAATTATCTAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTGAATCTCTTCAATGAAAAGAGACTTACTAAAATTATCTAAGTG  200

seq1  AACCCTGCCACGTGCTTAGAAGCAGAGGTCAGGAAAAGACAATCTTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCCACGTGCTTAGAAGCAGAGGTCAGGAAAAGACAATCTTCCAA  250

seq1  GAAGCAGGAAAACACAAAGAGGTACTAAGAAGGAAGAATGAAAGGCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGAAAACACAAAGAGGTACTAAGAAGGAAGAATGAAAGGCCAGG  300

seq1  GTACATTGATTATCTGAAGCAGAAAGGTAGCAACATCAGGATTCCACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTGATTATCTGAAGCAGAAAGGTAGCAACATCAGGATTCCACATC  350

seq1  TATACCATGTTGGGTCATATATGTGCTGCCCCTGACCTGCAGAAACCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCATGTTGGGTCATATATGTGCTGCCCCTGACCTGCAGAAACCCAA  400

seq1  CCCACTCCAGAAGTAGCCAGCCACCAAATCTGGCATAGCATCTGGTGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCAGAAGTAGCCAGCCACCAAATCTGGCATAGCATCTGGTGTAC  450

seq1  AAGGAATAATACATGGGACATAACATCTAATGTGGGTGAATCCCTGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAATACATGGGACATAACATCTAATGTGGGTGAATCCCTGAAAG  500

seq1  GGTAAGTGGCAAAAGCTTATGGACTTTTCTCACTTCGTATCCACAAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTGGCAAAAGCTTATGGACTTTTCTCACTTCGTATCCACAAAAGC  550

seq1  ATCCCAATACTGTTTTAGGCTGCCCTGCATTTTAACTACTGATTTAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAATACTGTTTTAGGCTGCCCTGCATTTTAACTACTGATTTAGTCT  600

seq1  TGAAAGTGCTCAGAGACACCCCATCTGAAGTTTCTACAGGAGTGAAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTGCTCAGAGACACCCCATCTGAAGTTTCTACAGGAGTGAAGCAT  650

seq1  AAGTAGGTGGCATTTCTCTATTAGTCACCCTGAAAACAAATACAGTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGTGGCATTTCTCTATTAGTCACCCTGAAAACAAATACAGTCAAA  700

seq1  TGAGTCCAAAAGAATCTTGTTAGAATCTAAAGAGGACATTCAGGCATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCAAAAGAATCTTGTTAGAATCTAAAGAGGACATTCAGGCATCTT  750

seq1  AGCCAGCTTGGCTGTTTCTTATCTATCTGATTTATCCCCAAAAAGTCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCTTGGCTGTTTCTTATCTATCTGATTTATCCCCAAAAAGTCCCC  800

seq1  TCCCCAAGAATCTCTTTGATCTTTACAGTCTTTGTTTTCAAATCCTCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAGAATCTCTTTGATCTTTACAGTCTTTGTTTTCAAATCCTCTGT  850

seq1  CTTCTATCTACATCCATTGAGCCTCACTCCTAAAGTCCAAATAGAAGTCA  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTCTATCTACATCCATTGAGCCTCACTCCTAAAGTCC-AATAGAAGTCA  899

seq1  GCATTATCTTTATCTGTCGCCAAAACACATGTTGCTTTCCTATT-GGGGA  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCATTATCTTTATCTGTCGCCAAAACACATGTTGCTTTCCTATTGGGGGA  949

seq1  GATAAGCACGTTAGGGTTTCCTGCCTGGCT-CTCAGTCAGAACGCCAGCG  998
      ||| |||||||||||||||||||||||||| ||||||||| |||||||||
seq2  GAT-AGCACGTTAGGGTTTCCTGCCTGGCTCCTCAGTCAG-ACGCCAGCG  997

seq1  TCTGATCATTTGTGAAG-CCTCCCACAGGATCCAGCCCCACGGTAAAGGC  1047
      |||||||||| |||||| ||||||||  ||||||| ||||||   |||||
seq2  TCTGATCATTGGTGAAGCCCTCCCAC-TGATCCAG-CCCACG--TAAGGC  1043

seq1  CACGAGGACATGTAAGCACGCTCATTCACCTGCAGCAAAAGATTTCACAA  1097
      ||||||||||||| |||||||||| |||| |||||| ||||||||| || 
seq2  CACGAGGACATGT-AGCACGCTCA-TCACTTGCAGC-AAAGATTTC-CA-  1088

seq1  CAATGTATAATATCGAGTTAT  1118
        |||||||||||||||||||
seq2  -CATGTATAATATCGAGTTAT  1108