BAC Information

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BAC

Clone NameB6Ng01-194O09
Chromosome13 (Build37)
Map Location 103,020,995 - 103,021,998
singlet/doubletsinglet
Overlap genenone
Upstream gene4933416M06Rik, LOC100039971, LOC100039983, Pik3r1
Downstream geneCd180, Mast4, EG621312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194O09.bB6Ng01-194O09.g
ACCGA017464GA017465
length1,011892
definitionB6Ng01-194O09.b B6Ng01-194O09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcccagccttttgtgaactgtgggcctagtggtagtgattta
gtgctgttttctatggtgcccatgccaagagaggtggggtggggaatagg
cactgaaccgttttatttcctatctcaggcctccagttatagaaaatgac
tgctaattaagccttccaaatgtgctattgttccaattctctctacaaat
ttgggtcacagctccatgtatcctcatggggtacgggaaataacagaaaa
cccctatgtcatgcatccctgggtcccagtcccagagatgacataatcca
ctcagtagtgttagcactttcaggtaaccattcaaggacagcatttttca
agatggtctgctggagcagtgaagtgggaagagatggatccaaacagggc
tggacaccatgtggtccagggatcaggtgacagcctatgaatttttagca
gtttatagagatgtcagtctaaggcttgtgtgtaagcactgaagaacttt
cacgggaatttcaaagtaatcttttatacttattcatttcatactgaaag
aaattgtaggcttctattttgtgttacttgttccatttcataagatattt
ctaacaagtttttgtcctctacatttgactttacttcctagttcctcaca
tacctggtctttttttggttttggtttttatgagaggttgaatttttcac
tgttgcatgctagattttgctatattcttttgcacggtggcgagcaccaa
gttacactctgagggattaggctgatgcctaagagatgtgctttgtctcc
agttaggaagctgagacagtggtaagactccacattctttacttctcatg
tgtcttcgccttggggatgatgcaacaaggctggctcaggccaggaaact
gatcagactagaaattaattcatttatttacagcttctgaaggctgaaaa
gtatagccttggagtccttgtgttgtgtgtcttattgatcggccctcctc
cctacattctc
gaattctgataggtgtggtcactgggagttcagggtaaaatttctttcta
gatattgggagttgatacttaggaatgaggatgaacttgggggaggtaca
caggagggaggaaatcagggtgttccaccaggatctgcttagtcccttca
gagaatggggagaagccacaataggtagtctactacagaactggcggtaa
gtctgggaggttggatttcaaagtgaggagggagacatgagaatccatgg
ttggactatttgccttcctggttggaatgccccagggaatgcctgctaga
gctggggacaaggccaagcaatgagtcagggaaagcaaagttggagggga
agattcactgaagatgggggcagagagggaggtgagaccacagcaggtgg
tctgctgcacagtggggcatgagaatgggggattggattggaagaaagga
gaggtaagatctgcagttatctgcttccctggcagaaggcatacatgctt
ttgaagaaattctagaggcagtatttgttaaagactcatttaatgtgatt
gtcttgctttacaaactacttctctaaacaacgaatttatagcatgatgt
taagaaatatgcttatttgatattagtatggcaagctggtcatttacctg
tcagcagaaggagcaaagagttggctttagccttctttgttaattcagtt
tacattggatataaattgctattgcaattttgacatgagtgactgctttc
atcttttacctgctggttgactgtatggacaaaatgttgtagagactttt
taaaaggtcctgttaataggaaacccatttctaggttgttcacttttaaa
ctttttaacattcattcacttttgaacacaacagtctctact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_103020995_103021998
seq2: B6Ng01-194O09.b_46_1056

seq1  GAATTCTTTCCCAGCCTTTTGTGAACTGTGGGCCTAGTGGTAGTGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCAGCCTTTTGTGAACTGTGGGCCTAGTGGTAGTGATTTA  50

seq1  GTGCTGTTTTCTATGGTGCCCATGCCAAGAGAGGTGGGGTGGGGAATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTTTTCTATGGTGCCCATGCCAAGAGAGGTGGGGTGGGGAATAGG  100

seq1  CACTGAACCGTTTTATTTCCTATCTCAGGCCTCCAGTTATAGAAAATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAACCGTTTTATTTCCTATCTCAGGCCTCCAGTTATAGAAAATGAC  150

seq1  TGCTAATTAAGCCTTCCAAATGTGCTATTGTTCCAATTCTCTCTACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATTAAGCCTTCCAAATGTGCTATTGTTCCAATTCTCTCTACAAAT  200

seq1  TTGGGTCACAGCTCCATGTATCCTCATGGGGTACGGGAAATAACAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCACAGCTCCATGTATCCTCATGGGGTACGGGAAATAACAGAAAA  250

seq1  CCCCTATGTCATGCATCCCTGGGTCCCAGTCCCAGAGATGACATAATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATGTCATGCATCCCTGGGTCCCAGTCCCAGAGATGACATAATCCA  300

seq1  CTCAGTAGTGTTAGCACTTTCAGGTAACCATTCAAGGACAGCATTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAGTGTTAGCACTTTCAGGTAACCATTCAAGGACAGCATTTTTCA  350

seq1  AGATGGTCTGCTGGAGCAGTGAAGTGGGAAGAGATGGATCCAAACAGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTCTGCTGGAGCAGTGAAGTGGGAAGAGATGGATCCAAACAGGGC  400

seq1  TGGACACCATGTGGTCCAGGGATCAGGTGACAGCCTATGAATTTTTAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACCATGTGGTCCAGGGATCAGGTGACAGCCTATGAATTTTTAGCA  450

seq1  GTTTATAGAGATGTCAGTCTAAGGCTTGTGTGTAAGCACTGAAGAACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAGAGATGTCAGTCTAAGGCTTGTGTGTAAGCACTGAAGAACTTT  500

seq1  CACGGGAATTTCAAAGTAATCTTTTATACTTATTCATTTCATACTGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGAATTTCAAAGTAATCTTTTATACTTATTCATTTCATACTGAAAG  550

seq1  AAATTGTAGGCTTCTATTTTGTGTTACTTGTTCCATTTCATAAGATATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTAGGCTTCTATTTTGTGTTACTTGTTCCATTTCATAAGATATTT  600

seq1  CTAACAAGTTTTTGTCCTCTACATTTGACTTTACTTCCTAGTTCCTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAGTTTTTGTCCTCTACATTTGACTTTACTTCCTAGTTCCTCACA  650

seq1  TACCTGGTCTTTTTTTGGTTTTGGTTTTTATGAGAGGTTGAATTTTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGTCTTTTTTTGGTTTTGGTTTTTATGAGAGGTTGAATTTTTCAC  700

seq1  TGTTGCATGCTAGATTTTGCTATATTCTTTTGCACGGTGGCGAGCACCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCATGCTAGATTTTGCTATATTCTTTTGCACGGTGGCGAGCACCAA  750

seq1  GTTACACTCTGAGGGATTAGGCTGATGCCTAAGAGATGTGCTTTGTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACTCTGAGGGATTAGGCTGATGCCTAAGAGATGTGCTTTGTCTCC  800

seq1  AGTTAGGAAGCTGAGACAGTGGTAAGACT-CACATTCTTTACTTCTCATG  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGTTAGGAAGCTGAGACAGTGGTAAGACTCCACATTCTTTACTTCTCATG  850

seq1  TGTCTTCGCCTTGTGGATGATGCAACAAGGCTGGCTCAGGCCAGGAAACT  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCGCCTTGGGGATGATGCAACAAGGCTGGCTCAGGCCAGGAAACT  900

seq1  GATCAGACTAGAAA-TAATTCATTTA-TTACAGC-TCTGAAGGCTGAAAA  946
      |||||||||||||| ||||||||||| ||||||| |||||||||||||||
seq2  GATCAGACTAGAAATTAATTCATTTATTTACAGCTTCTGAAGGCTGAAAA  950

seq1  GTACAGCCTTGAGGCCCTGGTGTTGTGTGTC-TAATGATC-GCCCT-CTC  993
      ||| |||||||  | ||| |||||||||||| || ||||| ||||| |||
seq2  GTATAGCCTTGGAGTCCTTGTGTTGTGTGTCTTATTGATCGGCCCTCCTC  1000

seq1  GCTACATTCTC  1004
       ||||||||||
seq2  CCTACATTCTC  1011