BAC Information

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BAC

Clone NameB6Ng01-194O19
Chromosome13 (Build37)
Map Location 4,628,516 - 4,629,532
singlet/doubletsinglet
Overlap genenone
Upstream geneAsb13, Calml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721
Downstream geneEG432723
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194O19.bB6Ng01-194O19.g
ACCGA017484GA017485
length1,0231,110
definitionB6Ng01-194O19.b B6Ng01-194O19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggctcctggccagcaggctgcggggcggggcctttgggcgt
gcagctttccctgaacgtggtgacgcgatagactgccaaaaagcgggcag
ctttgtagcaaactcaagggagggacttgctcgccattgccccatgagcc
tccgcctgtccccgccggggtagccatattttttctcactaagacttggg
gtgctccggcaccctcgcttgggtttcctagcctcagagaaaggccgagg
tggcagcagcggtggttgctgaaggcggcgcctgtaaaggcacgcaccac
ctccacttgggagaagtggggctcagcaatgggttgaaatccagagtact
tttcagagtggctccgcatgccatggtggcaagcagccgaggtttggctc
aggtgggctgggaaggaggagggcaaatggccccccacccaggtgtccaa
tgggtgtggggcccaggacagcagagccgagacaaggcaggtgggtgggg
ctgaggtggcactcacctcaaagcacagtttcagcatcctattaaaacta
ctgtggtgctaataaagaattgtaagatgtatttgtgtatcttggaaaac
ctataacaaaaattgtgtcttaggaacctgacaaagtgtttgttccttgt
tccaaacagcaattaatttggttattacagaatattaataattgatctat
tgcatacaatgattttaaataaaattgacaatcaatatccctaagataag
taaaaaaattgtttttatgcatgctttctgtatcttctacaaatttcatg
cattcatgcctctcaattattgtgtttaaaaaacaacccctctatgggaa
ataagtgggatgtgaaattagatcacatgttttaaattctttttgagcgc
cccccctgcttcagcacaagataaattaagttgtgtgctgtggatggtgt
tttaaaatgctgaatcattcaaacccttaattggatatttaatagtccat
attaatatctctcagagctccca
gaattcatgttgatgtccatggtccacacaacctccatgtgcaggccatg
gctgtaacctgaaaccaagtggaggcccatgctctgtgctcctgctggct
ctgaagaacaaagagtctacttttgctgtgatgttgatgcattcagttgc
acactgagaagacacatggaaggcttctgggacagcctctacccagcctc
taccctcatccgcccccaaagtaacagcctaaataggaagccatttaaga
gaaaacttaaaaagtggatttcctaagagtcactctccacagtcagtggc
ttctggcagaggtgtggtagggtaaggactcagttctgattcaaggggta
ggtcatgcagaattcaaccatgctccagtgagctccttccttccttcctt
ccttccttccttccttccttccttccttttatacttttcctttattacta
ttttttatcttttactttcttgttttggggcatttgtaaggtggatagac
attgaagggctggaaagtgatcaggatgaatgatatgcaactcccagaga
aaggataaaaatgttatgtgggaaaaaagaaattacatgtttatttccaa
acaagtagttctttctacagacatatattggttattttgaaaatgacagg
gagtcccatctctccctacagcacaggtatggggtgaagccactgttaag
cattgttacagggtattgaaaatattaatttcatgttatttcttctatat
attgaaaacatactattttttttcctgtgattgaacaaaattaccatggg
ccaggcatttagttctgagtggaatcaaatatcacacactctccctctgt
gcaataataacttggaaatggaggaattgtcagccaaatatttttttaat
agtttcattgtcctctggtggacctttaattccatgggagtctaagtgtt
cccccacttgagaaaacaacattgaaagcttcatggccattggcttccct
gtacatctgatttagtctaattctttcctgggttatgggtaggcatcaat
tttaaccttattttattccagtgaagtccagcatgggcaacatttacact
gaattattac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4628516_4629532
seq2: B6Ng01-194O19.g_144_1174

seq1  TGCTCTGTGCTCCTGCTGGCTCTGAAGAACAAAGAGTCTACTTTTGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGTGCTCCTGCTGGCTCTGAAGAACAAAGAGTCTACTTTTGCTGT  50

seq1  GATGTTGATGCATTCAGTTGCACACTGAGAAGACACATGGAAGGCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGATGCATTCAGTTGCACACTGAGAAGACACATGGAAGGCTTCTG  100

seq1  GGACAGCCTCTACCCAGCCTCTACCCTCATCCGCCCCCAAAGTAACAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCTCTACCCAGCCTCTACCCTCATCCGCCCCCAAAGTAACAGCC  150

seq1  TAAATAGGAAGCCATTTAAGAGAAAACTTAAAAAGTGGATTTCCTAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGGAAGCCATTTAAGAGAAAACTTAAAAAGTGGATTTCCTAAGAG  200

seq1  TCACTCTCCACAGTCAGTGGCTTCTGGCAGAGGTGTGGTAGGGTAAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCCACAGTCAGTGGCTTCTGGCAGAGGTGTGGTAGGGTAAGGAC  250

seq1  TCAGTTCTGATTCAAGGGGTAGGTCATGCAGAATTCAACCATGCTCCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTGATTCAAGGGGTAGGTCATGCAGAATTCAACCATGCTCCAGT  300

seq1  GAGCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTT  350

seq1  TATACTTTTCCTTTATTACTATTTTTTATCTTTTACTTTCTTGTTTTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTTCCTTTATTACTATTTTTTATCTTTTACTTTCTTGTTTTGGG  400

seq1  GCATTTGTAAGGTGGATAGACATTGAAGGGCTGGAAAGTGATCAGGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGTAAGGTGGATAGACATTGAAGGGCTGGAAAGTGATCAGGATGA  450

seq1  ATGATATGCAACTCCCAGAGAAAGGATAAAAATGTTATGTGGGAAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATGCAACTCCCAGAGAAAGGATAAAAATGTTATGTGGGAAAAAAG  500

seq1  AAATTACATGTTTATTTCCAAACAAGTAGTTCTTTCTACAGACATATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACATGTTTATTTCCAAACAAGTAGTTCTTTCTACAGACATATATT  550

seq1  GGTTATTTTGAAAATGACAGGGAGTCCCATCTCTCCCTACAGCACAGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTTTGAAAATGACAGGGAGTCCCATCTCTCCCTACAGCACAGGTA  600

seq1  TGGGGTGAAGCCACTGTTAAGCATTGTTACAGGGTATTGAAAATATTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGAAGCCACTGTTAAGCATTGTTACAGGGTATTGAAAATATTAAT  650

seq1  TTCATGTTATTTCTTCTATATATTGAAAACATACTA-TTTTTTTCCTGTG  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCATGTTATTTCTTCTATATATTGAAAACATACTATTTTTTTTCCTGTG  700

seq1  ATTGAACAAAATTACCATGGGCCAGGCATTTAGTTCTGAGTGGAATCAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACAAAATTACCATGGGCCAGGCATTTAGTTCTGAGTGGAATCAAA  750

seq1  TATCACACACTCTCCCTCTGTGCAATAATAACTTGG-AATGGAGGAATTG  798
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATCACACACTCTCCCTCTGTGCAATAATAACTTGGAAATGGAGGAATTG  800

seq1  TCAGCCAAATA-TTTTTTAATAGTTTCATTGT-CTCTGGTGGAC--TTTA  844
      ||||||||||| |||||||||||||||||||| |||||||||||  || |
seq2  TCAGCCAAATATTTTTTTAATAGTTTCATTGTCCTCTGGTGGACCTTTAA  850

seq1  TTCCAT-GGAGTCTAAGTGTT-CCCCAC-TGAGAAAACAACATTGAAAGC  891
      |||||| |||||||||||||| |||||| |||||||||||||||||||||
seq2  TTCCATGGGAGTCTAAGTGTTCCCCCACTTGAGAAAACAACATTGAAAGC  900

seq1  TTCATGG-CATT-GTTTCCCTGTACATCTGATTTAGTTCTAT--TTTTCT  937
      ||||||| |||| | ||||||||||||||||||||||   ||  ||| ||
seq2  TTCATGGCCATTGGCTTCCCTGTACATCTGATTTAGTCTAATTCTTTCCT  950

seq1  GTGTTATGGTAGGGAATCAATTTTAAACTTA-TTTATTCAATAAAAGT-C  985
      | |||||||   || ||||||||||| |||| ||||||| |   |||| |
seq2  GGGTTATGGGTAGGCATCAATTTTAACCTTATTTTATTCCAGTGAAGTCC  1000

seq1  AGCATGGG-AACATTTACACTGAAAATTATTAC  1017
      |||||||| |||||||||||||  |||||||||
seq2  AGCATGGGCAACATTTACACTG--AATTATTAC  1031