BAC Information

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BAC

Clone NameB6Ng01-195D09
Chromosome13 (Build37)
Map Location 25,397,405 - 25,398,108
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042017, Cmah, 5830431A10Rik, 6330500D04Rik, LOC666145, Gmnn, LOC100040800, BC005537, Them2, Ttrap, D130043K22Rik, Aldh5a1, Gpld1, Mrs2l, LOC675430, Dcdc2a, Nrsn1
Downstream geneTpi-rs8, LOC214973, LOC666221
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195D09.bB6Ng01-195D09.g
ACCGA017693GA017694
length7091,089
definitionB6Ng01-195D09.b B6Ng01-195D09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagcaggtgtggccactagcagtcctgggcaggtattggggct
acacaaaaaaatggggttagcctagaacatggtactgagagggtccacag
gaagaaggaaagctgggcctgccacaaagtttagtgtaatccccaaggag
agagagagagagagagagagagagagagagagagagagagagagagagag
agagagaatgggtctctgtaagtcttctataggattggggatgagactag
ggaattgatatccatgatcaggacaggaaggagagtgaggatatcttact
atcctatctgattcccaggctgacatggccagtgggttgctaagtaaaga
gtgctttggagtattgttgaatgacaaaaaggatatagaaggtgagggag
gaaggctgggtcctatgataatctatggagtccccaggaggagaaagagg
acccttacttgaaagtggtctgttctttgtttgatattttgaatcttttt
ttaaaatttaatctgatggatattgccaagttgaaacttagaatttttgc
tttcaaccatttagatctccattcacatattatccctttttctgacatat
cttagtttcatcaaggacagagattccctccctttaaaacagtagatcat
accaaacatggggataggaatatagtaggtattctacttgttgactggta
tcttgctaa
gaattctctgtttagctctatgccccatttttaataaggttatttggttt
ttttggagtctaacttcttcagttctttgtatatattgaatattagccct
ctatcggatttaggattggtaaagatcttttcccaatctattggtggcct
ttttgtcttattgacagtgttatttgccttacaaaaagctttgtaatttt
atgaggtcccatttgttatttcttgaccttacagtacaagccattggtgt
tatgttcaggaatttttccactgtgtccatatgttcaaggctcttcccca
atttctcctctgtaagtttcactgtctctggttttatgtggaggttcttg
atccacttagacttgagctttgtacgagatatgaatggaacaattagcat
acttctacatgctaaccaccagttaagctagcaccatttgttgaaaatgc
tctgttttttcccccactggatagttttagctcctttgtcaaagaccagg
tgatcataagtgtgtgggttcatttctgggtcttcagttctattccattg
atctacctgtctgtcactgtatcagtaccatgcagtttttatcataattg
ctctgtaggatagcttgaggtcaggtatggtgattccaccagaggttctt
ttattgttgagaatagtatttgctatcctaggttttttgttattccaaat
gaatttgcaaattgccctttctaactcagtgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgccttcagcaagatagccatt
tttactatattaatcctgccaatccaatgagcatggggagatcttttcca
tcttctgagatcttcttctcacctcttttctttcagagactggaagttct
tatcatagaaatccttcactttgcttagtttagggtcacaccaagatatt
tatattatttgtgactaattatgaaaggatgttgttttccctaatttctt
cctcagcctgtttattcctttgttgtagaagaaaggcaactgaatgtggt
ttgagtctaatccttataattccaagcctactttctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_25397405_25398108
seq2: B6Ng01-195D09.b_49_757

seq1  GAATTCCTAGCAGGTGTGGCCACTAGCAGTCCTGGGCAGGTATTGGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCAGGTGTGGCCACTAGCAGTCCTGGGCAGGTATTGGGGCT  50

seq1  ACACAAAAAAATGGGGTTAGCCTAGAACATGGTACTGAGAGGGTCCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAAAAATGGGGTTAGCCTAGAACATGGTACTGAGAGGGTCCACAG  100

seq1  GAAGAAGGAAAGCTGGGCCTGCCACAAAGTTTAGTGTAATCCCCAAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGAAAGCTGGGCCTGCCACAAAGTTTAGTGTAATCCCCAAGGAG  150

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  200

seq1  AGAGAGAATGGGTCTCTGTAAGTCTTCTATAGGATTGGGGATGAGACTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAATGGGTCTCTGTAAGTCTTCTATAGGATTGGGGATGAGACTAG  250

seq1  GGAATTGATATCCATGATCAGGACAGGAAGGAGAGTGAGGATATCTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGATATCCATGATCAGGACAGGAAGGAGAGTGAGGATATCTTACT  300

seq1  ATCCTATCTGATTCCCAGGCTGACATGGCCAGTGGGTTGCTAAGTAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATCTGATTCCCAGGCTGACATGGCCAGTGGGTTGCTAAGTAAAGA  350

seq1  GTGCTTTGGAGTATTGTTGAATGACAAAAAGGATATAGAAGGTGAGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTGGAGTATTGTTGAATGACAAAAAGGATATAGAAGGTGAGGGAG  400

seq1  GAAGGCTGGGTCCTATGATAATCTATGGAGTCCCCAGGAGGAGAAAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTGGGTCCTATGATAATCTATGGAGTCCCCAGGAGGAGAAAGAGG  450

seq1  ACCCTTACTTGAAAGTGGTCTGTTCTTTGTTTGATATTTTGAATCTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTACTTGAAAGTGGTCTGTTCTTTGTTTGATATTTTGAATCTTTTT  500

seq1  TTAAAATTTAATCTGATGGATATTGCCAAGTTGAAACTTAGAATTTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTAATCTGATGGATATTGCCAAGTTGAAACTTAGAATTTTTGC  550

seq1  TTTCAACCA-TTAGATCTCCATTCACATATTATCCCTTTTTCTGACATAT  599
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACCATTTAGATCTCCATTCACATATTATCCCTTTTTCTGACATAT  600

seq1  CTTAG-TTCATCAAGGACAGAGA-TACCTCCCTT--AAACAGTAGATCAT  645
      ||||| ||||||||||||||||| | ||||||||  ||||||||||||||
seq2  CTTAGTTTCATCAAGGACAGAGATTCCCTCCCTTTAAAACAGTAGATCAT  650

seq1  ACCAAACATGGGGATAGGAATATAGTAGGTATTCTACTTGTTGACTGGTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACATGGGGATAGGAATATAGTAGGTATTCTACTTGTTGACTGGTA  700

seq1  TCTTGCTAA  704
      |||||||||
seq2  TCTTGCTAA  709