BAC Information

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BAC

Clone NameB6Ng01-195J14
Chromosome13 (Build37)
Map Location 8,680,022 - 8,782,446
singlet/doubletdoublet
Overlap geneAdarb2
Upstream geneLOC791083, LOC382722, EG666941
Downstream geneWdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727, LOC100039719, Dip2c, LOC666986, Zmynd11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195J14.bB6Ng01-195J14.g
ACCGA017976GA017977
length914751
definitionB6Ng01-195J14.b B6Ng01-195J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,781,542 - 8,782,446)(8,680,022 - 8,680,771)
sequence
gaattctctggtgttctagtgacagggctgtgaaggtctctttacctgga
tcatggatgaaggagcattacctaccacaagaatcagcagatggatgtca
ctctttctcaggacttccatgtctgtaaaacccacagagctgttttctgc
agcagaacaccgtgctacccacaggtagccttgctcatctgtctctacct
cccagccacaagcacaggaccttaggtatcagaggtgcttaatactgttc
cagggaacctcaagctactccagtgctcatttgtttttgcttcctgagat
tgcatgagaaatttgactcctgttggtggcgtgtggaaaatgagcttccg
aggccatctggtgattaatttcaaccttcagaatgtcctggctctgcttg
tccacatcccctgctctggcctcctccccacaccttcaggagtccctggg
gtcattgcttgccaggcctgtgagggaatttcggaaacctgcctgacact
ttgctttattttgaaaaatgactcagtgtggagtcagctgtggagtggta
cgtggtgattttgtatgtcagactggaggcattctgtgccaatgcaggga
ccagcatccctaagcccatggcccccagtggaggggcaggaacactaagg
aagtcctgctgctctggggtcatgatggagacaattctgtctccagctgc
tcttaacacaaacattcttatgaacgctccattgagtcttccttgtcctg
ggcacacatttgcagactttctgttatgaacaacacattatatgtctatt
tgtgtgcatgttcagacactcttttgggcttggaaacacagtcgctgaat
gcatgtgttgtcagcctattcatgttttagtttatgtttcataatccgga
tcctggctctcctg
gaattccatattcatcttctgaggaacagagcaagaatggagcacaaaga
aaaagaaaaacacagaagaaccagaaggggaatatcaagtggttgcttat
ggacacagcaagcgctgccacttaaaatgtttcctccgtgaattatgtat
gagctgcggctttgtgctctcattatttctgggtttagcaccaatgagga
gaccttgtcagttatctcccatgcaggaaagaaaagacttctcatcgatc
agaccaggtgtcgcagagccgctcctttgatacaaaagaatgagttacta
atgggccggagagcatgctcagcccaatccaaacagggagataaatagat
tcttctatctattaattgcaaagggttcattggcatcttacttccttttt
agaagtagggggaggatattgaatacatttgctgaataaaaaaattacca
tatttatatccagtgaaacccttcataatgttgatgactggatacataac
taatgacatccctatctctctgtctctctgtctctctgtctctctctgtc
tcttgtctctctgtcactctgtctctctgtctctctgtctctctgtcttc
tctatgtctctctctgtctctgtctctctctctgtctctctctgtctctc
tctgtctctctgtctctctctctctgtctctctctgtctctctctctctg
tctctctctgtctctgtctctctcttctgtctgtctgtctctcttttctg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8781542_8782446
seq2: B6Ng01-195J14.b_48_961 (reverse)

seq1  CAGGA-AGCCA-GATCC-GATTAT-AAACAT-AACT-AAACATGAATA-G  43
      ||||| ||||| ||||| |||||| |||||| |||| ||||||||||| |
seq2  CAGGAGAGCCAGGATCCGGATTATGAAACATAAACTAAAACATGAATAGG  50

seq1  CTGACAACACATGCATTCAGCGACTGTGTTTCC-AGCCC-AAAGAGTGTC  91
      ||||||||||||||||||||||||||||||||| ||||| ||||||||||
seq2  CTGACAACACATGCATTCAGCGACTGTGTTTCCAAGCCCAAAAGAGTGTC  100

seq1  TGAACATGCACACAAATAGACATATAATGTGTTGTTCATAACAGAAAGTC  141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATGCACACAAATAGACATATAATGTGTTGTTCATAACAGAAAGTC  150

seq1  TGCAAATGTGTGCCCAGGACAAGGAAGACTCAATGGAGCGTTCATAAGAA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATGTGTGCCCAGGACAAGGAAGACTCAATGGAGCGTTCATAAGAA  200

seq1  TGTTTGTGTTAAGAGCAGCTGGAGACAGAATTGTCTCCATCATGACCCCA  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGTTAAGAGCAGCTGGAGACAGAATTGTCTCCATCATGACCCCA  250

seq1  GAGCAGCAGGACTTCCTTAGTGTTCCTGCCCCTCCACTGGGGGCCATGGG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCAGGACTTCCTTAGTGTTCCTGCCCCTCCACTGGGGGCCATGGG  300

seq1  CTTAGGGATGCTGGTCCCTGCATTGGCACAGAATGCCTCCAGTCTGACAT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGATGCTGGTCCCTGCATTGGCACAGAATGCCTCCAGTCTGACAT  350

seq1  ACAAAATCACCACGTACCACTCCACAGCTGACTCCACACTGAGTCATTTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCACCACGTACCACTCCACAGCTGACTCCACACTGAGTCATTTT  400

seq1  TCAAAATAAAGCAAAGTGTCAGGCAGGTTTCCGAAATTCCCTCACAGGCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAAAGCAAAGTGTCAGGCAGGTTTCCGAAATTCCCTCACAGGCC  450

seq1  TGGCAAGCAATGACCCCAGGGACTCCTGAAGGTGTGGGGAGGAGGCCAGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGCAATGACCCCAGGGACTCCTGAAGGTGTGGGGAGGAGGCCAGA  500

seq1  GCAGGGGATGTGGACAAGCAGAGCCAGGACATTCTGAAGGTTGAAATTAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGATGTGGACAAGCAGAGCCAGGACATTCTGAAGGTTGAAATTAA  550

seq1  TCACCAGATGGCCTCGGAAGCTCATTTTCCACACGCCACCAACAGGAGTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGATGGCCTCGGAAGCTCATTTTCCACACGCCACCAACAGGAGTC  600

seq1  AAATTTCTCATGCAATCTCAGGAAGCAAAAACAAATGAGCACTGGAGTAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTCATGCAATCTCAGGAAGCAAAAACAAATGAGCACTGGAGTAG  650

seq1  CTTGAGGTTCCCTGGAACAGTATTAAGCACCTCTGATACCTAAGGTCCTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTTCCCTGGAACAGTATTAAGCACCTCTGATACCTAAGGTCCTG  700

seq1  TGCTTGTGGCTGGGAGGTAGAGACAGATGAGCAAGGCTACCTGTGGGTAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTGGCTGGGAGGTAGAGACAGATGAGCAAGGCTACCTGTGGGTAG  750

seq1  CACGGTGTTCTGCTGCAGAAAACAGCTCTGTGGGTTTTACAGACATGGAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTGTTCTGCTGCAGAAAACAGCTCTGTGGGTTTTACAGACATGGAA  800

seq1  GTCCTGAGAAAGAGTGACATCCATCTGCTGATTCTTGTGGTAGGTAATGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGAAAGAGTGACATCCATCTGCTGATTCTTGTGGTAGGTAATGC  850

seq1  TCCTTCATCCATGATCCAGGTAAAGAGACCTTCACAGCCCTGTCACTAGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATCCATGATCCAGGTAAAGAGACCTTCACAGCCCTGTCACTAGA  900

seq1  ACACCAGAGAATTC  905
      ||||||||||||||
seq2  ACACCAGAGAATTC  914

seq1: chr13_8680022_8680771
seq2: B6Ng01-195J14.g_65_815

seq1  GAATTCCATATTCATCTTCTGAGGAACAGAGCAAGAATGGAGCACAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTCATCTTCTGAGGAACAGAGCAAGAATGGAGCACAAAGA  50

seq1  AAAAGAAAAACACAGAAGAACCAGAAGGGGAATATCAAGTGGTTGCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAACACAGAAGAACCAGAAGGGGAATATCAAGTGGTTGCTTAT  100

seq1  GGACACAGCAAGCGCTGCCACTTAAAATGTTTCCTCCGTGAATTATGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGCAAGCGCTGCCACTTAAAATGTTTCCTCCGTGAATTATGTAT  150

seq1  GAGCTGCGGCTTTGTGCTCTCATTATTTCTGGGTTTAGCACCAATGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCGGCTTTGTGCTCTCATTATTTCTGGGTTTAGCACCAATGAGGA  200

seq1  GACCTTGTCAGTTATCTCCCATGCAGGAAAGAAAAGACTTCTCATCGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGTCAGTTATCTCCCATGCAGGAAAGAAAAGACTTCTCATCGATC  250

seq1  AGACCAGGTGTCGCAGAGCCGCTCCTTTGATACAAAAGAATGAGTTACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGTGTCGCAGAGCCGCTCCTTTGATACAAAAGAATGAGTTACTA  300

seq1  ATGGGCCGGAGAGCATGCTCAGCCCAATCCAAACAGGGAGATAAATAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCGGAGAGCATGCTCAGCCCAATCCAAACAGGGAGATAAATAGAT  350

seq1  TCTTCTATCTATTAATTGCAAAGGGTTCATTGGCATCTTACTTCCTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTATCTATTAATTGCAAAGGGTTCATTGGCATCTTACTTCCTTTTT  400

seq1  AGAAGTAGGGGGAGGATATTGAATACATTTGCTGAATAAAAAAATTACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGGGGGAGGATATTGAATACATTTGCTGAATAAAAAAATTACCA  450

seq1  TATTTATATCCAGTGAAACCCTTCATAATGTTGATGACTGGATACATAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATCCAGTGAAACCCTTCATAATGTTGATGACTGGATACATAAC  500

seq1  TAATGACATCCCTATCTCTCTGTCTCTCTGTCTCTCTGTCTCTCTCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACATCCCTATCTCTCTGTCTCTCTGTCTCTCTGTCTCTCTCTGTC  550

seq1  TCTTGTCTCTCTGTCACTCTGTCTCTCTGTCTCTCTGTCTCTCTGTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTTGTCTCTCTGTCACTCTGTCTCTCTGTCTCTCTGTCTCTCTGTC-TT  599

seq1  CTCTATGTCTCTCTCTGTCTCTGTCTCTCTCTCTGTCTCTCTCTGTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTCTCTCTCTGTCTCTGTCTCTCTCTCTGTCTCTCTCTGTCTCT  649

seq1  CTCTGTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTCT  699

seq1  GTCTCTCTCTGTCTCTGTCTCTCTC-TCTGTCTGTCTGTCTCTC-TCTCT  748
      ||||||||||||||||||||||||| |||||||||||||||||| | |||
seq2  GTCTCTCTCTGTCTCTGTCTCTCTCTTCTGTCTGTCTGTCTCTCTTTTCT  749

seq1  GT  750
      ||
seq2  GT  751