BAC Information

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BAC

Clone NameB6Ng01-200I18
Chromosome13 (Build37)
Map Location 79,932,351 - 79,933,310
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666883
Downstream geneLOC666925, LOC382780, EG666933
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200I18.bB6Ng01-200I18.g
ACCGA021574GA021575
length9661,190
definitionB6Ng01-200I18.b B6Ng01-200I18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttgatattaataggagtgttcagcagcaatttcattataatg
caattttaattcatgtgccattgcattaaagcaatgctgaaatttatatt
tatttttgattattgtacatgatccctaattttaagaaacattgtaatgc
tgatgatatttgctttcaatagtctgaatacctcatatttaagactaatc
tctactacaaaatctttgacctatattagtaatgttaaagttgaaacagt
tcatatattaagtgttctagaacatttttaacatagacattattactaaa
ctctgtttcatgcaaatgatgttttatcagatgttattgacattcaatta
caaagatttttattatactgtatctctacttttagtgaaaatgtagcagt
gagatatatatgttgaatattttattaaaacaaaaacagattttattctt
tataaaaaatgtattccactgatcaacatgtctgtctctgtatcaatatc
atgcagtttttatcactattgttctgtaataaatcttgaggtcagagatg
gtgattcccacagttgttcttttattgttatgaattgttttgactattct
gggatttttgactttccagatgaatttgagaattgctctttccatgtctc
tgaaaaattgtattgggattttgatagggtttgcattgaatctatagatt
gcctttcataggatggccatttttactatgttaattttgccaatctgtga
gcatgggagatgtctgcatttctaagatcttctttgatttctttcttgag
agacttgaatttattgtcatataggtctttcacttgtttggttagagtta
ccccaagattttgtatactatttgtggctattgtgaagggaattgtttac
gtaattattttcgtggcctgttcatcatttctttaaaggaagggatactg
atttattcgagttaat

gaattcctgaagagaacacaagtggcttgtactataagatcaagcatcaa
caaatgggatttcataaaattgctaagtttctgtaaggcaaggacgctgt
caataagacaaaaagacatccaacagattgggaaaagatctttaccaatt
ctaaatttgatagagggttaatatccaataaatacatagaattcaagaag
ttacaatccaagaaaccaaataaccccattaaacatggggcagagagcta
aacaaagaattctcaactgaagaatactgaatggctgagtgttgggagcc
gcgcccacattcgccgttataagatggcgctgacagctgtgttctaagtg
gtaaacaaataatctgcgcatgtgccaagggtatcttatgactacttgtg
ctctgccttccccgtgacgtcaactcggccgatgggctgcagccaatcag
ggagtgacacgtccgaggcgaaggagaatgctccttaagagggacggggt
ttcgttttctctctctcttgcttcttgctctcttgcttcttacactcttg
ctcctgaagatgtaagaaataaagctttgccgcagaagattctggtctgt
ggtgttcttcctggccggtcgtgagaacgcgtctaataacagctgagaag
taccaaaataaatgttcaacatccttagtcatcagtaaaacgcaaatcaa
aatagccctgagatttccacctcacaccagtcacagtggctaagatcaaa
aatttatgtgacagtagatgctggcaaggatgtggagaaagaggaacatt
tttcattgctggtgggattgaaagttggtacaaccactctggaaatcagt
ttgggagttcctcagaaaactggacatagtactattgggaagatatagca
ataccaatctagggcaatataccccaaatgatgctccaacttgtaataag
gaccacatgcttccacttatgttcaaagcagccttattttataaatagct
cagaagctgagagaactcaaaatgtccctcacaggaggatggataacaga
aaaatgtgtacatttacacaatggagtactatgcactagtaacaatgact
tatgaaatctagacaatgattgaatctggagaattcatctactgagttac
caatccaaaggaccataccattagatatggtcacttacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79932351_79933310
seq2: B6Ng01-200I18.b_47_1007

seq1  GAATTCATTTGATATTAATAGGAGTGTTCAGCAGCAATTTCATTATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGATATTAATAGGAGTGTTCAGCAGCAATTTCATTATAATG  50

seq1  CAATTTTAATTCATGTGCCATTGCATTAAAGCAATGCTGAAATTTATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTAATTCATGTGCCATTGCATTAAAGCAATGCTGAAATTTATATT  100

seq1  TATTTTTGATTATTGTACATGATCCCTAATTTTAAGAAACATTGTAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGATTATTGTACATGATCCCTAATTTTAAGAAACATTGTAATGC  150

seq1  TGATGATATTTGCTTTCAATAGTCTGAATACCTCATATTTAAGACTAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATATTTGCTTTCAATAGTCTGAATACCTCATATTTAAGACTAATC  200

seq1  TCTACTACAAAATCTTTGACCTATATTAGTAATGTTAAAGTTGAAACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTACAAAATCTTTGACCTATATTAGTAATGTTAAAGTTGAAACAGT  250

seq1  TCATATATTAAGTGTTCTAGAACATTTTTAACATAGACATTATTACTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATTAAGTGTTCTAGAACATTTTTAACATAGACATTATTACTAAA  300

seq1  CTCTGTTTCATGCAAATGATGTTTTATCAGATGTTATTGACATTCAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTCATGCAAATGATGTTTTATCAGATGTTATTGACATTCAATTA  350

seq1  CAAAGATTTTTATTATACTGTATCTCTACTTTTAGTGAAAATGTAGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATTTTTATTATACTGTATCTCTACTTTTAGTGAAAATGTAGCAGT  400

seq1  GAGATATATATGTTGAATATTTTATTAAAACAAAAACAGATTTTATTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATATATGTTGAATATTTTATTAAAACAAAAACAGATTTTATTCTT  450

seq1  TATAAAAAATGTATTCCACTGATCAACATGTCTGTCTCTGTATCAATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAATGTATTCCACTGATCAACATGTCTGTCTCTGTATCAATATC  500

seq1  ATGCAGTTTTTATCACTATTGTTCTGTAATAAATCTTGAGGTCAGAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTTTTATCACTATTGTTCTGTAATAAATCTTGAGGTCAGAGATG  550

seq1  GTGATTCCCACAGTTGTTCTTTTATTGTTATGAATTGTTTTGACTATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCCCACAGTTGTTCTTTTATTGTTATGAATTGTTTTGACTATTCT  600

seq1  GGGATTTTTGACTTTCCAGATGAATTTGAGAATTGCTCTTTCCATGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTTTGACTTTCCAGATGAATTTGAGAATTGCTCTTTCCATGTCTC  650

seq1  TGAAAAATTGTATTGGGATTTTGATAGGGTTTGCATTGAATCTATAGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATTGTATTGGGATTTTGATAGGGTTTGCATTGAATCTATAGATT  700

seq1  GCCTTTCATAGGATGGCCATTTTTACTATGTTAATTTTGCCAATCTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCATAGGATGGCCATTTTTACTATGTTAATTTTGCCAATCTGTGA  750

seq1  GCATGGGAGATGTCTGCATTTCTAAGATCTTCTTTGATTTCTTTCTTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGAGATGTCTGCATTTCTAAGATCTTCTTTGATTTCTTTCTTGAG  800

seq1  AGACTTGAATTTATTGTCATATAGGTCTTTCACTTGTTTGGTTAGAGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGAATTTATTGTCATATAGGTCTTTCACTTGTTTGGTTAGAGTTA  850

seq1  CCCCAAGATTTTGTATACTATTTGTGGCTATTGTGAAGGGAATTGTTTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGATTTTGTATACTATTTGTGGCTATTGTGAAGGGAATTGTTTAC  900

seq1  GTAATTATTTTCGTGGCCTGTTCATCATTTCTTTAAAGGAA-GGATACTG  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTAATTATTTTCGTGGCCTGTTCATCATTTCTTTAAAGGAAGGGATACTG  950

seq1  ATTTATTCGAG  960
      |||||||||||
seq2  ATTTATTCGAG  961


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