BAC Information

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BAC

Clone NameB6Ng01-200P07
Chromosome13 (Build37)
Map Location 116,743,492 - 116,744,076
singlet/doubletsinglet
Overlap genenone
Upstream geneItga1, Pelo, LOC100041023, LOC547402, LOC100041045
Downstream geneEG623174, Isl1, EG668276, Gm280, LOC100041169, Parp8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200P07.b
ACCGA021865
length579
definitionB6Ng01-200P07.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
attttgagcctttacagtataaacaaagactctattcaagtttcataaat
tcttttagtacaccagatgtaaaatcaattaactgtagtagaaatataga
ctcatattttaagtgctatatgattataaatgcgtggtctgaaggtttta
aaacattaatatgagctatgtggcttaaaatattttttgttgttgtttat
acttttattttaaaattttcctgtttaatttttaacatttcccctagata
gatgcagtaaaagactcttttagaaattaggaaggggataacatttgaaa
tgtaaataaagaaaatatctaataaagtgtattttattatgatatggttt
ttaaaaaagaaacatcataacataacgttttcattttcaaaataatgtct
cagaaaatttgttgtcaggaaaagaactaatttatccactgttttcagga
aaacaactaatttacactttaccatggcttcttagaaatgagtacataca
tcctgagatttcttaaaaggcatgacttaaaagatgctgtgcagtctctc
agagggaaaacagagggggggggtggtat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_116743492_116744076
seq2: B6Ng01-200P07.b_48_632

seq1  GAATTCATTTTGAGCCTTTACAGTATAAACAAAGACACTATTCAAGTTTC  50
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAATTCATTTTGAGCCTTTACAGTATAAACAAAGACTCTATTCAAGTTTC  50

seq1  ATAAATTCTTTTAGTACACCAGATGTAAAATCAATTAACTGTAGTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCTTTTAGTACACCAGATGTAAAATCAATTAACTGTAGTAGAAA  100

seq1  TATAGACTCATATTTTAAGTGCTATATGATTATAAATGCGTGGTCTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACTCATATTTTAAGTGCTATATGATTATAAATGCGTGGTCTGAAG  150

seq1  GTTTTAAAACATTAATATGAGCTATGTGGCTTAAAATATTTTTTGTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAACATTAATATGAGCTATGTGGCTTAAAATATTTTTTGTTGTT  200

seq1  GTTTATACTTTTATTTTAAAATTTTCCTGTTTAATTTTTAACATTTCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATACTTTTATTTTAAAATTTTCCTGTTTAATTTTTAACATTTCCCC  250

seq1  TAGATAGATGCAGTAAAAGACTCTTTTAGAAATTAGGAAGGGGATAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATGCAGTAAAAGACTCTTTTAGAAATTAGGAAGGGGATAACAT  300

seq1  TTGAAATGTAAATAAAGAAAATATCTAATAAAGTGTATTTTATTATGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGTAAATAAAGAAAATATCTAATAAAGTGTATTTTATTATGATA  350

seq1  TGGTTTTTAAAAAAGAAACATCATAACATAACGTTTTCATTTTCAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTAAAAAAGAAACATCATAACATAACGTTTTCATTTTCAAAATA  400

seq1  ATGTCTCAGAAAATTTGTTGTCAGGAAAAGAACTAATTTATCCACTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCAGAAAATTTGTTGTCAGGAAAAGAACTAATTTATCCACTGTTT  450

seq1  TCAGGAAAACAACTAATTTACACTTTACCATGGCTTCTCAGAAATGAGTA  500
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCAGGAAAACAACTAATTTACACTTTACCATGGCTTCTTAGAAATGAGTA  500

seq1  CATACATCCTGAGATTTCTTAAAAGGCATGACTTAAAAGATGCTGTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATCCTGAGATTTCTTAAAAGGCATGACTTAAAAGATGCTGTGCAG  550

seq1  TCTCTCAGAGGGAAAACAGAGGGGGGGGGTGGTAT  585
      |||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGAGGGAAAACAGAGGGGGGGGGTGGTAT  585


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